| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is flgL [H]
Identifier: 167623368
GI number: 167623368
Start: 1734300
End: 1735490
Strand: Direct
Name: flgL [H]
Synonym: Shal_1437
Alternate gene names: 167623368
Gene position: 1734300-1735490 (Clockwise)
Preceding gene: 167623367
Following gene: 167623369
Centisome position: 33.18
GC content: 45.42
Gene sequence:
>1191_bases ATGCGAATTTCTACTGCGCAAATGTTTCACCAAAACATAAATAGCGTGACTCAAAAACAGTCGCAAACAAGTCAAATTAT CGAGCAGTTATCGACAGGTAAACGCGTCAATACTGCTGGTGACGATCCTGTGGCAGCTGCAGGAATTAATAACTTGAATC AGAAAAACTCTGTTGTCGATCAGTTCCTAAAGAATATTGATTATGCCAAAAATCGATTGTCTATCTCTGAAAGTAAGCTT GGCAGTGCTGCAACGCTCGCAAGTAGCGTCAGAGAGCAGGTGCTAAGGGCGGTAAACGGCAGCTTGACCGATTCCGATCG GCAAACTGTTGCCGATGAGATGCGCGGCAGCCTCGAAGAGTTGATGGCGATAGCCAACAGTAAAGATGAATCGGGTAATT ACCTGTTTGGTGGATTCAATACGGGTAGTCAGCCTTTTGAGTTCGATGCCAGCGGTAATGCGGTTTATCACGGCGATAGT GGCGTCAGAGAGAGTGTCGTTGCATCCGGCACGACTATTGGTGCCAATATCCCGGGTGATCTCGCTTTTATGAATGCAGC TAATGGCTTAGGAGATTACAGCGTCAATTATTTGGCTACACAAACTGGCGAATTCAATGTTGAAAGCGCCAAAGTCACAG ATCCGGCAACACATGTGCCAGATACCTACACATTTAACATGGTGGGCAATGACTTAGAAGTCAGAGATTCGACAAATGCG GTCGTAACAACGGTTACCGCATTTGATCCCAACACTCCTGTATCGTTTAACGGTATAGAAGTGAAACTCGATGGTAAACC CGCGCCTGGTGACTCATTTACCATGGAACACGCACCAGAAGTGAGTTTGCTCGACACCATCAATAGTGCCATTGCGCTCA TTGAGGATCCCAACAAGGTAAACACTCCAGCAGGAAAGTCTGAGTTGGCACAGATGTTGAATAACATCGACAGCGGAATG AATCAATTGGATCTTGCAAGAGGCGTAGCGGGTAATAGTTTAAAAAGCTTAGACAGTTATGCAGCAACCCATGAAGAAGA GCAGATTGTAAACAACTCGGCGTTATCTATGTTGGAAGATTTAGATTATGCCGAGGCGATAACGCAATTGGAGCAGCAGC AACAAGCTTTAAATGCCGCATCAAGTGTATTTACTAAGGTCGGCACCGTGTCACTGTTTGATTATATCTAG
Upstream 100 bases:
>100_bases TGAAATATTCAACACGCTATTTAGCTCACTGCGCTAGCAATGAATGCTTGAAGATTTAAGACTGGGTTAGGCACTGGATT TAGGAACAGGAATTAGAATT
Downstream 100 bases:
>100_bases CAGTCAATGTGGACCTAAATAACTCGAACATAAATTAACCGAAATTAGCCAAGTCTGAAGTCTTGGCGGTAACTTTAGAT AAAGGAAAATAAAGATGGCT
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MRISTAQMFHQNINSVTQKQSQTSQIIEQLSTGKRVNTAGDDPVAAAGINNLNQKNSVVDQFLKNIDYAKNRLSISESKL GSAATLASSVREQVLRAVNGSLTDSDRQTVADEMRGSLEELMAIANSKDESGNYLFGGFNTGSQPFEFDASGNAVYHGDS GVRESVVASGTTIGANIPGDLAFMNAANGLGDYSVNYLATQTGEFNVESAKVTDPATHVPDTYTFNMVGNDLEVRDSTNA VVTTVTAFDPNTPVSFNGIEVKLDGKPAPGDSFTMEHAPEVSLLDTINSAIALIEDPNKVNTPAGKSELAQMLNNIDSGM NQLDLARGVAGNSLKSLDSYAATHEEEQIVNNSALSMLEDLDYAEAITQLEQQQQALNAASSVFTKVGTVSLFDYI
Sequences:
>Translated_396_residues MRISTAQMFHQNINSVTQKQSQTSQIIEQLSTGKRVNTAGDDPVAAAGINNLNQKNSVVDQFLKNIDYAKNRLSISESKL GSAATLASSVREQVLRAVNGSLTDSDRQTVADEMRGSLEELMAIANSKDESGNYLFGGFNTGSQPFEFDASGNAVYHGDS GVRESVVASGTTIGANIPGDLAFMNAANGLGDYSVNYLATQTGEFNVESAKVTDPATHVPDTYTFNMVGNDLEVRDSTNA VVTTVTAFDPNTPVSFNGIEVKLDGKPAPGDSFTMEHAPEVSLLDTINSAIALIEDPNKVNTPAGKSELAQMLNNIDSGM NQLDLARGVAGNSLKSLDSYAATHEEEQIVNNSALSMLEDLDYAEAITQLEQQQQALNAASSVFTKVGTVSLFDYI >Mature_396_residues MRISTAQMFHQNINSVTQKQSQTSQIIEQLSTGKRVNTAGDDPVAAAGINNLNQKNSVVDQFLKNIDYAKNRLSISESKL GSAATLASSVREQVLRAVNGSLTDSDRQTVADEMRGSLEELMAIANSKDESGNYLFGGFNTGSQPFEFDASGNAVYHGDS GVRESVVASGTTIGANIPGDLAFMNAANGLGDYSVNYLATQTGEFNVESAKVTDPATHVPDTYTFNMVGNDLEVRDSTNA VVTTVTAFDPNTPVSFNGIEVKLDGKPAPGDSFTMEHAPEVSLLDTINSAIALIEDPNKVNTPAGKSELAQMLNNIDSGM NQLDLARGVAGNSLKSLDSYAATHEEEQIVNNSALSMLEDLDYAEAITQLEQQQQALNAASSVFTKVGTVSLFDYI
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=173, Percent_Identity=33.5260115606936, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 42172; Mature: 42172
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISTAQMFHQNINSVTQKQSQTSQIIEQLSTGKRVNTAGDDPVAAAGINNLNQKNSVVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCCCCHHHHHHH QFLKNIDYAKNRLSISESKLGSAATLASSVREQVLRAVNGSLTDSDRQTVADEMRGSLEE HHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LMAIANSKDESGNYLFGGFNTGSQPFEFDASGNAVYHGDSGVRESVVASGTTIGANIPGD HHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCEEEECCCCHHHHHHHCCCEECCCCCCC LAFMNAANGLGDYSVNYLATQTGEFNVESAKVTDPATHVPDTYTFNMVGNDLEVRDSTNA CHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCE VVTTVTAFDPNTPVSFNGIEVKLDGKPAPGDSFTMEHAPEVSLLDTINSAIALIEDPNKV EEEEEEEECCCCCCEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCC NTPAGKSELAQMLNNIDSGMNQLDLARGVAGNSLKSLDSYAATHEEEQIVNNSALSMLED CCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDYAEAITQLEQQQQALNAASSVFTKVGTVSLFDYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRISTAQMFHQNINSVTQKQSQTSQIIEQLSTGKRVNTAGDDPVAAAGINNLNQKNSVVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCCCCHHHHHHH QFLKNIDYAKNRLSISESKLGSAATLASSVREQVLRAVNGSLTDSDRQTVADEMRGSLEE HHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LMAIANSKDESGNYLFGGFNTGSQPFEFDASGNAVYHGDSGVRESVVASGTTIGANIPGD HHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCEEEECCCCHHHHHHHCCCEECCCCCCC LAFMNAANGLGDYSVNYLATQTGEFNVESAKVTDPATHVPDTYTFNMVGNDLEVRDSTNA CHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCE VVTTVTAFDPNTPVSFNGIEVKLDGKPAPGDSFTMEHAPEVSLLDTINSAIALIEDPNKV EEEEEEEECCCCCCEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCC NTPAGKSELAQMLNNIDSGMNQLDLARGVAGNSLKSLDSYAATHEEEQIVNNSALSMLED CCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDYAEAITQLEQQQQALNAASSVFTKVGTVSLFDYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2193164; 11677609 [H]