Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is flgK [H]

Identifier: 167623367

GI number: 167623367

Start: 1732317

End: 1734236

Strand: Direct

Name: flgK [H]

Synonym: Shal_1436

Alternate gene names: 167623367

Gene position: 1732317-1734236 (Clockwise)

Preceding gene: 167623366

Following gene: 167623368

Centisome position: 33.14

GC content: 47.66

Gene sequence:

>1920_bases
ATGTCTTTAGACTTAATGAATATTGCTCGCACCGGCGTGTTGGCCTCACAGTCACAACTGGCGATTACCAGTAATAACAT
CGCTAATGCTAATACCGCAGGTTACAACCGTCAGGTGGTATCTCAGTCGGCGCTAGATTCACAGCGCATGGGCAATGAAT
TTTATGGCGCAGGTACTTATGTGTCTGATGTTAAACGCGTCTATAACGATTATGCTACACGGGAACTGCGCATAGGCTCT
ACCGCTGTCAGTGAATCACAAACCACCTTTAGCAAGATGAGTCAGCTTGACCAGCTATTCTCGCAAATGGGAAAAGCTGT
GCCGCAGGGGCTAAATGATTTCTTCGCCAGCATGAATGCCTTAGCAGACATTCCTAATGATATGGGGCTGCGTGGTTCGT
TTTTAACCAGTGCGAATCAGTTAGCCAATAGCGTTAATCAGATGCAGAGTCATCTTGATAGCCAAATGACCCAAACCAAT
GATCAGATCTCCGCTGTTACCGACCGAATCAATGAGATCAGTAATGAGCTTGGTAGTATCAACCGTGAGTTGATGAAGTC
TCAGGGTCAAGATATGCAGTTGCTAGATAAGCAAGATGCCTTGATTTTAGAGCTCAGTGAGTACGCATCCGTTAACGTAA
TACCGCTAGAATCTGGTGCCAAGAGCATTATGCTCGGAGGCTCGATGATGCTGGTATCGGGCGAAATGTCGATGCAAGTG
GGCACAGCACCGGGCGACCCCTACCCGAATGAGTTACAGATCACTGCGCAATCGGGCAGCAAGAGCATGATTGTCGATGC
GAGTAAAATGGGCGGCCAGTTAGGTGCGTTAGTTAATTATCGCGATGAAACCTTGATCCCGTCACAGATGGAGCTTGGGC
AATTTGCTTTAGGCGTTAGTGATGCGTTTAACCAAGCGCAAGCGCAAGGCTTCGACTTAAATGGCCAAGTGGGCGCTAAT
ATCTTTACCGACATCAACGACCCATCGATGCAATTAGGTCGTGTAGGTGCATTATCAAGCAATACCGGTACAGCCAATCT
AAGCGTTAATATTGATGATGTAGGCAGTTTAACTGGCAGCAGTTATGAACTTAAGTTTACTGCGCCATCAACCTATGAGC
TGAAAGATGCCGTCAGCGGCAATATTACGCCGCTAACACTTAACGGCACAAAACTCGAAGGCGCTAACGGCTTTAGCATC
AATATCGATGCCGGTGCACTGGCCTCTGGGGATACCTTTGAAATCCGTCCAACCTCAAGTGCAGCGGTTTCATTATCGGT
TGAAATGACCGATGCCAAAGGTATTGCTGCAGCAGGGGCAAAGATCACCGCCGATGCGGCAAATACTGGCAATAGCCAAG
TTAGTTTAGTCAGCATTGATAAAAGAACTGAAACGGGCTTTCCTGTAACAGGCGCCGAACTTACCTTTGAAATTGATCCT
TCTACAACGCCGCCAAGCTATGAAGTGTTTGACGTTGATGGCGCATCCCTTGGTGCGGACACTTATACACCGCCAACAAT
CAGCTCGCATGGTTTTACCTTCGAGATTGATTCAACTGCGACCGCCGCAGAGAAGTTCACCTTCGATTTGTCATTTGCCG
AGGGCGATAACACAAACATGGTGAGTATGGCCAAGCTCAGCGAAGCCAAACTGATGAATGGCGGTAAAACCACGCTGACA
GATGTTTTTGAAAATACAACAATCGATGTGGGCAGTAAGACTAAGTCGGCTGAAATATCGATGGGATCGGCTGAGGCCAT
TTATAAGCAGGCCTATACCCGCGTTCAAAGTGTTTCTGGGGTCAATCTTGATGAAGAGGCGGCAAATCTGATGCGTTTTC
AGCAGTCATATCAGGCCTCTGCGCGGATCATGACCACCGCCAATGAAATATTCAACACGCTATTTAGCTCACTGCGCTAG

Upstream 100 bases:

>100_bases
GTCATGAAAACCATTACTCGAGACTTTAAAGATGTCTTGCAAGGGGTTAAGCAATGATGAATCGATTTGTTCAACCTCTT
GAAGTAGGGAGCCAGCACTC

Downstream 100 bases:

>100_bases
CAATGAATGCTTGAAGATTTAAGACTGGGTTAGGCACTGGATTTAGGAACAGGAATTAGAATTATGCGAATTTCTACTGC
GCAAATGTTTCACCAAAACA

Product: flagellar hook-associated protein FlgK

Products: NA

Alternate protein names: HAP1 [H]

Number of amino acids: Translated: 639; Mature: 638

Protein sequence:

>639_residues
MSLDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNEFYGAGTYVSDVKRVYNDYATRELRIGS
TAVSESQTTFSKMSQLDQLFSQMGKAVPQGLNDFFASMNALADIPNDMGLRGSFLTSANQLANSVNQMQSHLDSQMTQTN
DQISAVTDRINEISNELGSINRELMKSQGQDMQLLDKQDALILELSEYASVNVIPLESGAKSIMLGGSMMLVSGEMSMQV
GTAPGDPYPNELQITAQSGSKSMIVDASKMGGQLGALVNYRDETLIPSQMELGQFALGVSDAFNQAQAQGFDLNGQVGAN
IFTDINDPSMQLGRVGALSSNTGTANLSVNIDDVGSLTGSSYELKFTAPSTYELKDAVSGNITPLTLNGTKLEGANGFSI
NIDAGALASGDTFEIRPTSSAAVSLSVEMTDAKGIAAAGAKITADAANTGNSQVSLVSIDKRTETGFPVTGAELTFEIDP
STTPPSYEVFDVDGASLGADTYTPPTISSHGFTFEIDSTATAAEKFTFDLSFAEGDNTNMVSMAKLSEAKLMNGGKTTLT
DVFENTTIDVGSKTKSAEISMGSAEAIYKQAYTRVQSVSGVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR

Sequences:

>Translated_639_residues
MSLDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNEFYGAGTYVSDVKRVYNDYATRELRIGS
TAVSESQTTFSKMSQLDQLFSQMGKAVPQGLNDFFASMNALADIPNDMGLRGSFLTSANQLANSVNQMQSHLDSQMTQTN
DQISAVTDRINEISNELGSINRELMKSQGQDMQLLDKQDALILELSEYASVNVIPLESGAKSIMLGGSMMLVSGEMSMQV
GTAPGDPYPNELQITAQSGSKSMIVDASKMGGQLGALVNYRDETLIPSQMELGQFALGVSDAFNQAQAQGFDLNGQVGAN
IFTDINDPSMQLGRVGALSSNTGTANLSVNIDDVGSLTGSSYELKFTAPSTYELKDAVSGNITPLTLNGTKLEGANGFSI
NIDAGALASGDTFEIRPTSSAAVSLSVEMTDAKGIAAAGAKITADAANTGNSQVSLVSIDKRTETGFPVTGAELTFEIDP
STTPPSYEVFDVDGASLGADTYTPPTISSHGFTFEIDSTATAAEKFTFDLSFAEGDNTNMVSMAKLSEAKLMNGGKTTLT
DVFENTTIDVGSKTKSAEISMGSAEAIYKQAYTRVQSVSGVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR
>Mature_638_residues
SLDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNEFYGAGTYVSDVKRVYNDYATRELRIGST
AVSESQTTFSKMSQLDQLFSQMGKAVPQGLNDFFASMNALADIPNDMGLRGSFLTSANQLANSVNQMQSHLDSQMTQTND
QISAVTDRINEISNELGSINRELMKSQGQDMQLLDKQDALILELSEYASVNVIPLESGAKSIMLGGSMMLVSGEMSMQVG
TAPGDPYPNELQITAQSGSKSMIVDASKMGGQLGALVNYRDETLIPSQMELGQFALGVSDAFNQAQAQGFDLNGQVGANI
FTDINDPSMQLGRVGALSSNTGTANLSVNIDDVGSLTGSSYELKFTAPSTYELKDAVSGNITPLTLNGTKLEGANGFSIN
IDAGALASGDTFEIRPTSSAAVSLSVEMTDAKGIAAAGAKITADAANTGNSQVSLVSIDKRTETGFPVTGAELTFEIDPS
TTPPSYEVFDVDGASLGADTYTPPTISSHGFTFEIDSTATAAEKFTFDLSFAEGDNTNMVSMAKLSEAKLMNGGKTTLTD
VFENTTIDVGSKTKSAEISMGSAEAIYKQAYTRVQSVSGVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR

Specific function: Unknown

COG id: COG1256

COG function: function code N; Flagellar hook-associated protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787323, Length=453, Percent_Identity=26.9315673289183, Blast_Score=159, Evalue=7e-40,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR002371 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 67704; Mature: 67573

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNEFYGAGTY
CCCCHHHHHHHCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCH
VSDVKRVYNDYATRELRIGSTAVSESQTTFSKMSQLDQLFSQMGKAVPQGLNDFFASMNA
HHHHHHHHHHHCCCEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LADIPNDMGLRGSFLTSANQLANSVNQMQSHLDSQMTQTNDQISAVTDRINEISNELGSI
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
NRELMKSQGQDMQLLDKQDALILELSEYASVNVIPLESGAKSIMLGGSMMLVSGEMSMQV
HHHHHHCCCCCCCHHCCCCCEEEEEHHHCEEEEEECCCCCCEEEECCEEEEEECCCEEEE
GTAPGDPYPNELQITAQSGSKSMIVDASKMGGQLGALVNYRDETLIPSQMELGQFALGVS
ECCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCEEHEEECCCCCCCCCHHHHHHHHCCHH
DAFNQAQAQGFDLNGQVGANIFTDINDPSMQLGRVGALSSNTGTANLSVNIDDVGSLTGS
HHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHCCEEEECCCCCEEEEEEECCCCCCCCCC
SYELKFTAPSTYELKDAVSGNITPLTLNGTKLEGANGFSINIDAGALASGDTFEIRPTSS
CEEEEEECCCCEEHHHHCCCCCEEEEECCCEECCCCCEEEEECCCCCCCCCEEEEECCCC
AAVSLSVEMTDAKGIAAAGAKITADAANTGNSQVSLVSIDKRTETGFPVTGAELTFEIDP
CEEEEEEEEECCCCEEECCCEEEECCCCCCCCEEEEEEEECCCCCCCCEECCEEEEEECC
STTPPSYEVFDVDGASLGADTYTPPTISSHGFTFEIDSTATAAEKFTFDLSFAEGDNTNM
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCE
VSMAKLSEAKLMNGGKTTLTDVFENTTIDVGSKTKSAEISMGSAEAIYKQAYTRVQSVSG
EEEHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHCC
VNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR
CCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNEFYGAGTY
CCCHHHHHHHCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCH
VSDVKRVYNDYATRELRIGSTAVSESQTTFSKMSQLDQLFSQMGKAVPQGLNDFFASMNA
HHHHHHHHHHHCCCEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LADIPNDMGLRGSFLTSANQLANSVNQMQSHLDSQMTQTNDQISAVTDRINEISNELGSI
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
NRELMKSQGQDMQLLDKQDALILELSEYASVNVIPLESGAKSIMLGGSMMLVSGEMSMQV
HHHHHHCCCCCCCHHCCCCCEEEEEHHHCEEEEEECCCCCCEEEECCEEEEEECCCEEEE
GTAPGDPYPNELQITAQSGSKSMIVDASKMGGQLGALVNYRDETLIPSQMELGQFALGVS
ECCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCEEHEEECCCCCCCCCHHHHHHHHCCHH
DAFNQAQAQGFDLNGQVGANIFTDINDPSMQLGRVGALSSNTGTANLSVNIDDVGSLTGS
HHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHCCEEEECCCCCEEEEEEECCCCCCCCCC
SYELKFTAPSTYELKDAVSGNITPLTLNGTKLEGANGFSINIDAGALASGDTFEIRPTSS
CEEEEEECCCCEEHHHHCCCCCEEEEECCCEECCCCCEEEEECCCCCCCCCEEEEECCCC
AAVSLSVEMTDAKGIAAAGAKITADAANTGNSQVSLVSIDKRTETGFPVTGAELTFEIDP
CEEEEEEEEECCCCEEECCCEEEECCCCCCCCEEEEEEEECCCCCCCCEECCEEEEEECC
STTPPSYEVFDVDGASLGADTYTPPTISSHGFTFEIDSTATAAEKFTFDLSFAEGDNTNM
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCE
VSMAKLSEAKLMNGGKTTLTDVFENTTIDVGSKTKSAEISMGSAEAIYKQAYTRVQSVSG
EEEHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHCC
VNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR
CCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8158647 [H]