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The map label for this gene is recA

Identifier: 167623166

GI number: 167623166

Start: 1497704

End: 1498771

Strand: Direct

Name: recA

Synonym: Shal_1232

Alternate gene names: 167623166

Gene position: 1497704-1498771 (Clockwise)

Preceding gene: 167623164

Following gene: 167623167

Centisome position: 28.65

GC content: 44.85

Gene sequence:

>1068_bases
ATGAAGACAGATCCAAATAAAGAGAAAGCACTGAACGCAGTTTTAAGCCAGATTGAGAAGCAGTTTGGTAAAGGCTCAAT
CATGAAGCTAGGCGAAGACCGTTCAATGGACGTAGAAACGATTTCTACTGGCTCATTATCTTTGGATGTTGCCTTAGGCG
CTGGCGGATTGCCTATGGGTCGTATCGTTGAAATCTACGGTCCAGAATCATCAGGTAAAACTACACTGACACTAGAAGTT
ATTGCAGCGGCTCAGAAGCAAGGTAAAACCTGTGCCTTTATCGATGCTGAGCATGCACTAGACCCGATTTATGCGAAAAA
GCTAGGTGTGGATATCGACAACCTACTTTGTTCTCAGCCTGATACGGGTGAACAAGCTCTTGAAATTTGTGATGCATTAA
CACGCAGCGGCGCAGTTGACGTTATCGTTGTCGACTCAGTAGCAGCCTTGACACCAAAGGCTGAAATTGAAGGCGAGATT
GGCGACTCTCACATGGGCCTTGCGGCGCGTATGATGAGCCAAGCAATGCGTAAGCTTGCGGGTAACCTTAAGCAGTCAAA
TACTCTGCTTATCTTTATTAACCAAATTCGTATGAAGATTGGTGTTATGTTCGGTAATCCTGAAACGACTACTGGCGGTA
ACGCACTTAAGTTCTACGCTTCAGTTCGCTTAGATATCCGCCGTACTGGTGCGATTAAAGATAGAGAAGAAGTGATAGGT
AACGAAACCCGCGTTAAAGTGGTTAAGAACAAGATTGCTGCACCATTCAAGCAAGCCGAGTTCCAAATTCTTTACGGACA
AGGTATTAACAGTACCGGCGAGCTAGTTGACCTTGGTGTACAGCATAAACTAATTGAAAAATCAGGTGCTTGGTATGCTT
ATAAAGGTAACAAGATTGGTCAGGGCCGTGCAAACGCGGGTAAATACCTAATCGAAAACCCTGAAGTGTCTGACGAAATT
GAAACGACACTACGCGCTATGCTGTTAGGCAATGGTGAGAAAATTGCTCCAGATGCTGCAGATACAGCCGGTGACAACGT
TGACTTAGAGACTGGCGAAGTTTTTTAA

Upstream 100 bases:

>100_bases
AGTTTCATATTGAGGCTCTAGCCAAGGCTTAAATGAGTCATCACCCTAATGATAAATCAGTGCCCATACCGTGTTGCACT
GTGATCCAGAGGATATCAGA

Downstream 100 bases:

>100_bases
GACCAATTTGCTAGTTAAGTGACCTAGCGTTGTAAGGCTGGGTCGCAATTAGCAATAGATATTGGCAATGGATAGTGAAT
ATCGCGGTGTGCTATTAGCA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKTDPNKEKALNAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQKQGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDREEVIG
NETRVKVVKNKIAAPFKQAEFQILYGQGINSTGELVDLGVQHKLIEKSGAWYAYKGNKIGQGRANAGKYLIENPEVSDEI
ETTLRAMLLGNGEKIAPDAADTAGDNVDLETGEVF

Sequences:

>Translated_355_residues
MKTDPNKEKALNAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQKQGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDREEVIG
NETRVKVVKNKIAAPFKQAEFQILYGQGINSTGELVDLGVQHKLIEKSGAWYAYKGNKIGQGRANAGKYLIENPEVSDEI
ETTLRAMLLGNGEKIAPDAADTAGDNVDLETGEVF
>Mature_355_residues
MKTDPNKEKALNAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQKQGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDREEVIG
NETRVKVVKNKIAAPFKQAEFQILYGQGINSTGELVDLGVQHKLIEKSGAWYAYKGNKIGQGRANAGKYLIENPEVSDEI
ETTLRAMLLGNGEKIAPDAADTAGDNVDLETGEVF

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=331, Percent_Identity=86.7069486404834, Blast_Score=591, Evalue=1e-170,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_SHEHH (B0TK14)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001673460.1
- ProteinModelPortal:   B0TK14
- SMR:   B0TK14
- GeneID:   5904113
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_1232
- HOGENOM:   HBG339889
- OMA:   RAMLLGN
- ProtClustDB:   PRK09354
- BioCyc:   SHAL458817:SHAL_1232-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 38004; Mature: 38004

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDPNKEKALNAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMG
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCC
RIVEIYGPESSGKTTLTLEVIAAAQKQGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQP
CEEEEECCCCCCCEEEEEEEEEHHHHCCCEEEEEEHHHCCCHHHHHHHCCCHHHHHCCCC
DTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA
CCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDREEVIG
CCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHC
NETRVKVVKNKIAAPFKQAEFQILYGQGINSTGELVDLGVQHKLIEKSGAWYAYKGNKIG
CCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEECCHHHHHHHCCCCEEEEECCCCC
QGRANAGKYLIENPEVSDEIETTLRAMLLGNGEKIAPDAADTAGDNVDLETGEVF
CCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTDPNKEKALNAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMG
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCC
RIVEIYGPESSGKTTLTLEVIAAAQKQGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQP
CEEEEECCCCCCCEEEEEEEEEHHHHCCCEEEEEEHHHCCCHHHHHHHCCCHHHHHCCCC
DTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA
CCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDREEVIG
CCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHC
NETRVKVVKNKIAAPFKQAEFQILYGQGINSTGELVDLGVQHKLIEKSGAWYAYKGNKIG
CCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEECCHHHHHHHCCCCEEEEECCCCC
QGRANAGKYLIENPEVSDEIETTLRAMLLGNGEKIAPDAADTAGDNVDLETGEVF
CCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA