The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is 167623053

Identifier: 167623053

GI number: 167623053

Start: 1359061

End: 1359612

Strand: Direct

Name: 167623053

Synonym: Shal_1119

Alternate gene names: NA

Gene position: 1359061-1359612 (Clockwise)

Preceding gene: 167623051

Following gene: 167623059

Centisome position: 26.0

GC content: 43.3

Gene sequence:

>552_bases
ATGGAGAAGACTATGCTGGCGAGACTCATGCACGATCATAAGCATATTGCTATTTTACTTAAGGTCTTAAAGAATAAATA
CACTAAGCTGTCCGCCGGTGAAGCGATAAACTATAACCTAGTGCGAGATATAGTGGAGTATATGCAGAGTTATGCAGAGC
ATAGCCATCATCCGTTAGAAGAGGTCATTTCAGAGTTTTATTGGAATAAGCTTGGTCGAGCACATATCAATGAAAAGCTG
ACTTCTGAGCATCAGAAGTTAGGCGAGGCCTCCGCGTCTCTAATGGCGACATTAAACCTCATTTTGAATGATACCGTGGT
ATCGAAAGAGCAGTTAGTTGCCGATCTAGAAAGTTATGTGCGGATGCAGCAAGCGCATATGGAATTTGAGGAGTCGACGG
TATTTCCGAAATGGAAGGAGGTCATTACCGATGATGACTGGCACGTGGTCGCGGCCATGTGTAATGCTCGCTTAATTGAT
GACCCTCTGTTTAGTGATAGTGATAAGGTTCTGTTTGAAGAGCTTAGAGAGTACTTGAACACCGCAGAATAA

Upstream 100 bases:

>100_bases
AAGTTAGTTGATCTTTATCATTAGTCTTGTTGTAATTCACTTGTTATATTGGGTGTTCTTTATACGATTTACTAATATTA
ACGGTAGTGGTGGAATTAGG

Downstream 100 bases:

>100_bases
CGATTTTGTCGAACCTGTGGTATTTTGTTGTTCGAGTAAAATTAAAGAAGAGCGCTTTAAGCGCTCTTCTATTTGGTTTT
ACATCAGGAGGGTATCAAGC

Product: hemerythrin HHE cation-binding domain-containing protein

Products: NA

Alternate protein names: Hemerythrin Family Protein

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MEKTMLARLMHDHKHIAILLKVLKNKYTKLSAGEAINYNLVRDIVEYMQSYAEHSHHPLEEVISEFYWNKLGRAHINEKL
TSEHQKLGEASASLMATLNLILNDTVVSKEQLVADLESYVRMQQAHMEFEESTVFPKWKEVITDDDWHVVAAMCNARLID
DPLFSDSDKVLFEELREYLNTAE

Sequences:

>Translated_183_residues
MEKTMLARLMHDHKHIAILLKVLKNKYTKLSAGEAINYNLVRDIVEYMQSYAEHSHHPLEEVISEFYWNKLGRAHINEKL
TSEHQKLGEASASLMATLNLILNDTVVSKEQLVADLESYVRMQQAHMEFEESTVFPKWKEVITDDDWHVVAAMCNARLID
DPLFSDSDKVLFEELREYLNTAE
>Mature_183_residues
MEKTMLARLMHDHKHIAILLKVLKNKYTKLSAGEAINYNLVRDIVEYMQSYAEHSHHPLEEVISEFYWNKLGRAHINEKL
TSEHQKLGEASASLMATLNLILNDTVVSKEQLVADLESYVRMQQAHMEFEESTVFPKWKEVITDDDWHVVAAMCNARLID
DPLFSDSDKVLFEELREYLNTAE

Specific function: Unknown

COG id: COG3945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21277; Mature: 21277

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTMLARLMHDHKHIAILLKVLKNKYTKLSAGEAINYNLVRDIVEYMQSYAEHSHHPLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
EVISEFYWNKLGRAHINEKLTSEHQKLGEASASLMATLNLILNDTVVSKEQLVADLESYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMQQAHMEFEESTVFPKWKEVITDDDWHVVAAMCNARLIDDPLFSDSDKVLFEELREYLN
HHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHH
TAE
CCC
>Mature Secondary Structure
MEKTMLARLMHDHKHIAILLKVLKNKYTKLSAGEAINYNLVRDIVEYMQSYAEHSHHPLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
EVISEFYWNKLGRAHINEKLTSEHQKLGEASASLMATLNLILNDTVVSKEQLVADLESYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMQQAHMEFEESTVFPKWKEVITDDDWHVVAAMCNARLIDDPLFSDSDKVLFEELREYLN
HHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHH
TAE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA