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The map label for this gene is yaaJ [H]

Identifier: 167623059

GI number: 167623059

Start: 1367121

End: 1368602

Strand: Direct

Name: yaaJ [H]

Synonym: Shal_1125

Alternate gene names: 167623059

Gene position: 1367121-1368602 (Clockwise)

Preceding gene: 167623053

Following gene: 167623060

Centisome position: 26.16

GC content: 46.29

Gene sequence:

>1482_bases
ATGATAGAAACAACGATTAACTTTCTCAATGCGCTGCTTTGGGGAAAGCTTTTAGTATATGGTCTGGTCGGTGCCGGACT
GTATTTTACGATTCGACTGGCATTTATACAGCTCACTCATTTTAAGCATTCTGGTGAAATTATGCTTAAAAGCCGACAAG
GTGGAGGCCAAAGCGGTCTTTCATCTTTTCAAGTTTTCTGTACTAGCATGGCTGCGCGCGTTGGTGCCGGTAATATGGCT
GGTGTGGCCGTTGCAATTACTGCGGCAGGTCCTGGTGCCGTATTCTGGATGTGGCTTATTGCTATACTCGGTATGGCTAC
CGCTATGGTTGAATCGACGTTGGCACAGGTTTATAAAGTGCGCGATGAAGACGGCCAGTATCGTGGTGGCCCCTCTTATT
ATATGGAGAAGGGACTTGGTCAACGTTGGATGGGGATCCTATTCTCAATCTTCCTGATCATTGCGTTTGGCTTAGTGTTC
AATGCTGTTCAAGCCAATACCATTACCGGTGCGATGACTCAGGTCTTCGGCTTTGACCCTACTTATGTCGGTATCGGCAT
AGTGATTGTTAGCGCGTTTGTCATCATGGGCGGCCTAAATAAGGTGGCCAAGGTCTCTGAAATCGTTGTTCCGATTATGG
CTTTAGCCTATATCTTGATCGCATTTGTTGTTGTGGCAATGAACTTCGAGAAGCTACCAGATGTATTTATGCTGGTGATT
AAGAGTGCCTTCGGTCTGCAGGAAGCTGTGGCTGGTGGTGTGGCTTATACTATCGCTCAGGCTATGCAAGCAGGTATTGC
TCGTGGTCTATTCTCTAACGAAGCGGGTATGGGTAGTGCTGCTAACGTTGCAGCGAGTGCTTCACCAAACCCAAACCATC
CAGCATCGCAAGGCTTTGTACAGATGATGGGTGTGTTTGTTGATACCATCGTTATCTGTACTGCGACTGCTGCCATCATT
TTGTTAGCGGGCGACGTAGGCTCAGACAGTGATGGCATCAAACTTACAATTGATGCTCTTACACAGCATGTTGGTCCATG
GGGCGGTGGGTTCGTTGCATTAGCGATTTTACTATTCTGCTTTACTTCAATTATTGCCAATTACTCTTACGCTGAAACCA
ACGTAATGTATTTATCGGGTAATAGTAAGAAAGCACTACCAATATTTAGAGTCTGTGTTTTAGGTATGGTGATGTTTGGT
GCTGTCGCAAAAATTGGCCTAGTGTGGAACTTAGCCGATGTGTCTATGGGTCTAATGGCGACGGTGAACATTATCGCCTT
ACTGCTATTGTCTGGTTTAGCGATTCGAGTGATTAACGATTATCGTCAACAGCTGAAAAGCGGCGAGACGCCAACGTTTG
ACGCTAGCAAGTTCCCAGAGCTATCTAATTTAGAAGGCGGAATTTGGACGAGCAAAACTGTTGAAGAGGAAGCCAAGGCT
CAAGCTAAGGCCGTAGCGAAAGCTGAAGCCGCTAATGCTTAA

Upstream 100 bases:

>100_bases
AAACTGCTGTTATTTAAATACCTTAGGAAGGATAAAAACAGGATAAACTAATCTAGCGTTCGTCTTGCTCGATTCTGTTT
GTCATGGGGATTGAAATTAT

Downstream 100 bases:

>100_bases
TCTATAAGTTTTATCAGTACAATCTAAAAAACCACGCTGTTTAAGCGTGGTTTTTTTGTTTTTGTTCAGTATCATTAGCT
TAATTATTTATCTTTAAAGG

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MIETTINFLNALLWGKLLVYGLVGAGLYFTIRLAFIQLTHFKHSGEIMLKSRQGGGQSGLSSFQVFCTSMAARVGAGNMA
GVAVAITAAGPGAVFWMWLIAILGMATAMVESTLAQVYKVRDEDGQYRGGPSYYMEKGLGQRWMGILFSIFLIIAFGLVF
NAVQANTITGAMTQVFGFDPTYVGIGIVIVSAFVIMGGLNKVAKVSEIVVPIMALAYILIAFVVVAMNFEKLPDVFMLVI
KSAFGLQEAVAGGVAYTIAQAMQAGIARGLFSNEAGMGSAANVAASASPNPNHPASQGFVQMMGVFVDTIVICTATAAII
LLAGDVGSDSDGIKLTIDALTQHVGPWGGGFVALAILLFCFTSIIANYSYAETNVMYLSGNSKKALPIFRVCVLGMVMFG
AVAKIGLVWNLADVSMGLMATVNIIALLLLSGLAIRVINDYRQQLKSGETPTFDASKFPELSNLEGGIWTSKTVEEEAKA
QAKAVAKAEAANA

Sequences:

>Translated_493_residues
MIETTINFLNALLWGKLLVYGLVGAGLYFTIRLAFIQLTHFKHSGEIMLKSRQGGGQSGLSSFQVFCTSMAARVGAGNMA
GVAVAITAAGPGAVFWMWLIAILGMATAMVESTLAQVYKVRDEDGQYRGGPSYYMEKGLGQRWMGILFSIFLIIAFGLVF
NAVQANTITGAMTQVFGFDPTYVGIGIVIVSAFVIMGGLNKVAKVSEIVVPIMALAYILIAFVVVAMNFEKLPDVFMLVI
KSAFGLQEAVAGGVAYTIAQAMQAGIARGLFSNEAGMGSAANVAASASPNPNHPASQGFVQMMGVFVDTIVICTATAAII
LLAGDVGSDSDGIKLTIDALTQHVGPWGGGFVALAILLFCFTSIIANYSYAETNVMYLSGNSKKALPIFRVCVLGMVMFG
AVAKIGLVWNLADVSMGLMATVNIIALLLLSGLAIRVINDYRQQLKSGETPTFDASKFPELSNLEGGIWTSKTVEEEAKA
QAKAVAKAEAANA
>Mature_493_residues
MIETTINFLNALLWGKLLVYGLVGAGLYFTIRLAFIQLTHFKHSGEIMLKSRQGGGQSGLSSFQVFCTSMAARVGAGNMA
GVAVAITAAGPGAVFWMWLIAILGMATAMVESTLAQVYKVRDEDGQYRGGPSYYMEKGLGQRWMGILFSIFLIIAFGLVF
NAVQANTITGAMTQVFGFDPTYVGIGIVIVSAFVIMGGLNKVAKVSEIVVPIMALAYILIAFVVVAMNFEKLPDVFMLVI
KSAFGLQEAVAGGVAYTIAQAMQAGIARGLFSNEAGMGSAANVAASASPNPNHPASQGFVQMMGVFVDTIVICTATAAII
LLAGDVGSDSDGIKLTIDALTQHVGPWGGGFVALAILLFCFTSIIANYSYAETNVMYLSGNSKKALPIFRVCVLGMVMFG
AVAKIGLVWNLADVSMGLMATVNIIALLLLSGLAIRVINDYRQQLKSGETPTFDASKFPELSNLEGGIWTSKTVEEEAKA
QAKAVAKAEAANA

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=472, Percent_Identity=46.3983050847458, Blast_Score=422, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 51986; Mature: 51986

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETTINFLNALLWGKLLVYGLVGAGLYFTIRLAFIQLTHFKHSGEIMLKSRQGGGQSGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH
SSFQVFCTSMAARVGAGNMAGVAVAITAAGPGAVFWMWLIAILGMATAMVESTLAQVYKV
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDEDGQYRGGPSYYMEKGLGQRWMGILFSIFLIIAFGLVFNAVQANTITGAMTQVFGFDP
HCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TYVGIGIVIVSAFVIMGGLNKVAKVSEIVVPIMALAYILIAFVVVAMNFEKLPDVFMLVI
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
KSAFGLQEAVAGGVAYTIAQAMQAGIARGLFSNEAGMGSAANVAASASPNPNHPASQGFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHH
QMMGVFVDTIVICTATAAIILLAGDVGSDSDGIKLTIDALTQHVGPWGGGFVALAILLFC
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEHHHHHHHCCCCCCHHHHHHHHHHH
FTSIIANYSYAETNVMYLSGNSKKALPIFRVCVLGMVMFGAVAKIGLVWNLADVSMGLMA
HHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVNIIALLLLSGLAIRVINDYRQQLKSGETPTFDASKFPELSNLEGGIWTSKTVEEEAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QAKAVAKAEAANA
HHHHHHHHHCCCC
>Mature Secondary Structure
MIETTINFLNALLWGKLLVYGLVGAGLYFTIRLAFIQLTHFKHSGEIMLKSRQGGGQSGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH
SSFQVFCTSMAARVGAGNMAGVAVAITAAGPGAVFWMWLIAILGMATAMVESTLAQVYKV
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDEDGQYRGGPSYYMEKGLGQRWMGILFSIFLIIAFGLVFNAVQANTITGAMTQVFGFDP
HCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TYVGIGIVIVSAFVIMGGLNKVAKVSEIVVPIMALAYILIAFVVVAMNFEKLPDVFMLVI
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
KSAFGLQEAVAGGVAYTIAQAMQAGIARGLFSNEAGMGSAANVAASASPNPNHPASQGFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHH
QMMGVFVDTIVICTATAAIILLAGDVGSDSDGIKLTIDALTQHVGPWGGGFVALAILLFC
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEHHHHHHHCCCCCCHHHHHHHHHHH
FTSIIANYSYAETNVMYLSGNSKKALPIFRVCVLGMVMFGAVAKIGLVWNLADVSMGLMA
HHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVNIIALLLLSGLAIRVINDYRQQLKSGETPTFDASKFPELSNLEGGIWTSKTVEEEAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QAKAVAKAEAANA
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]