Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623051

Identifier: 167623051

GI number: 167623051

Start: 1357669

End: 1357959

Strand: Direct

Name: 167623051

Synonym: Shal_1117

Alternate gene names: NA

Gene position: 1357669-1357959 (Clockwise)

Preceding gene: 167623050

Following gene: 167623053

Centisome position: 25.97

GC content: 43.64

Gene sequence:

>291_bases
GTGTTTCGTTTTGTCATAGCTATTTTATGCGTTAGCCTTTTAAGTGGTTGTGCGAGTGAAGAGTTTGAACTTTATCATCG
GATCAACGAAGCTTATGACTTTGAAGTAACCCACTGTGACAGTTTTGCCATGGTGACTGGAATTGGACGGGGCGATAATG
CACTCGCTGACGCAAGATTGAGCGCCATTAAGCAAGGTGAAGAGCTTAAAGGCACCCATATCGTATGGTTGCAATCAGAC
TTAGGCGAGCCTACCAAAGTGGTTGCAGTGATCTACAAATGTTTAATGTAG

Upstream 100 bases:

>100_bases
AAGTGTGACAGCTAAAGCTGATGCGGTGCGATCTGTATCACTATTTTTAATGGCAAATTTTTATATCGTGCGCCGCAGTT
TTTAAATTGGAGTCGGTATT

Downstream 100 bases:

>100_bases
CAAATTAGGAATTAAGATCACTGCTTAGCGAGAAAACGTAACCAGTTAATCTCTTCCTGCCAGATCTCTGGGCGTATCGT
TTCTAAAATAAGTGGGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MFRFVIAILCVSLLSGCASEEFELYHRINEAYDFEVTHCDSFAMVTGIGRGDNALADARLSAIKQGEELKGTHIVWLQSD
LGEPTKVVAVIYKCLM

Sequences:

>Translated_96_residues
MFRFVIAILCVSLLSGCASEEFELYHRINEAYDFEVTHCDSFAMVTGIGRGDNALADARLSAIKQGEELKGTHIVWLQSD
LGEPTKVVAVIYKCLM
>Mature_96_residues
MFRFVIAILCVSLLSGCASEEFELYHRINEAYDFEVTHCDSFAMVTGIGRGDNALADARLSAIKQGEELKGTHIVWLQSD
LGEPTKVVAVIYKCLM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10657; Mature: 10657

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRFVIAILCVSLLSGCASEEFELYHRINEAYDFEVTHCDSFAMVTGIGRGDNALADARL
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCCCHHHHHHH
SAIKQGEELKGTHIVWLQSDLGEPTKVVAVIYKCLM
HHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MFRFVIAILCVSLLSGCASEEFELYHRINEAYDFEVTHCDSFAMVTGIGRGDNALADARL
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCCCHHHHHHH
SAIKQGEELKGTHIVWLQSDLGEPTKVVAVIYKCLM
HHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA