| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623051
Identifier: 167623051
GI number: 167623051
Start: 1357669
End: 1357959
Strand: Direct
Name: 167623051
Synonym: Shal_1117
Alternate gene names: NA
Gene position: 1357669-1357959 (Clockwise)
Preceding gene: 167623050
Following gene: 167623053
Centisome position: 25.97
GC content: 43.64
Gene sequence:
>291_bases GTGTTTCGTTTTGTCATAGCTATTTTATGCGTTAGCCTTTTAAGTGGTTGTGCGAGTGAAGAGTTTGAACTTTATCATCG GATCAACGAAGCTTATGACTTTGAAGTAACCCACTGTGACAGTTTTGCCATGGTGACTGGAATTGGACGGGGCGATAATG CACTCGCTGACGCAAGATTGAGCGCCATTAAGCAAGGTGAAGAGCTTAAAGGCACCCATATCGTATGGTTGCAATCAGAC TTAGGCGAGCCTACCAAAGTGGTTGCAGTGATCTACAAATGTTTAATGTAG
Upstream 100 bases:
>100_bases AAGTGTGACAGCTAAAGCTGATGCGGTGCGATCTGTATCACTATTTTTAATGGCAAATTTTTATATCGTGCGCCGCAGTT TTTAAATTGGAGTCGGTATT
Downstream 100 bases:
>100_bases CAAATTAGGAATTAAGATCACTGCTTAGCGAGAAAACGTAACCAGTTAATCTCTTCCTGCCAGATCTCTGGGCGTATCGT TTCTAAAATAAGTGGGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MFRFVIAILCVSLLSGCASEEFELYHRINEAYDFEVTHCDSFAMVTGIGRGDNALADARLSAIKQGEELKGTHIVWLQSD LGEPTKVVAVIYKCLM
Sequences:
>Translated_96_residues MFRFVIAILCVSLLSGCASEEFELYHRINEAYDFEVTHCDSFAMVTGIGRGDNALADARLSAIKQGEELKGTHIVWLQSD LGEPTKVVAVIYKCLM >Mature_96_residues MFRFVIAILCVSLLSGCASEEFELYHRINEAYDFEVTHCDSFAMVTGIGRGDNALADARLSAIKQGEELKGTHIVWLQSD LGEPTKVVAVIYKCLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10657; Mature: 10657
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFVIAILCVSLLSGCASEEFELYHRINEAYDFEVTHCDSFAMVTGIGRGDNALADARL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCCCHHHHHHH SAIKQGEELKGTHIVWLQSDLGEPTKVVAVIYKCLM HHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHC >Mature Secondary Structure MFRFVIAILCVSLLSGCASEEFELYHRINEAYDFEVTHCDSFAMVTGIGRGDNALADARL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCCCHHHHHHH SAIKQGEELKGTHIVWLQSDLGEPTKVVAVIYKCLM HHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA