Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622929

Identifier: 167622929

GI number: 167622929

Start: 1218290

End: 1218883

Strand: Direct

Name: 167622929

Synonym: Shal_0990

Alternate gene names: NA

Gene position: 1218290-1218883 (Clockwise)

Preceding gene: 167622928

Following gene: 167622930

Centisome position: 23.31

GC content: 44.11

Gene sequence:

>594_bases
GTGAGAACTAAGAGAAAAGTCAGTCAGTCTAAGCGAGAGCCGCAACCTATGAGTCATGAGCATTTTAAAGGTCAGTTTGA
AGTCGAGCTAAAGTACCGTTTGGCGTGCAGGGATGCATTCTTAGCGGTACTTAATTCGCTAGAACATGAGATAATGTTTG
AAGATAATATCGAGTCAGATTGTTATTTCGATACGCCAACCCAGCAGCTTTTAGCTCAAAATAAGAGTGTCTGCATACGT
GAGTGCCAACCGTCAGGTATTAAGCTCTGGATAGTCAAGGGGCCGGAGGCCGATCGCTGTGAAGCGACCAATATCACCGA
TACTAATAGCGCTAAAAGCATGCTCAAAACCATGGGTTATCAGGTGTGTTTAGAGATGCAGAAACAGCGAAGTATCTATT
TTGTCGGTAAGTTCCATATCACGCTTGATCACTTAGCAGGACTAGGTGATTTTGCCGAGTTTGCCATCATGACCGATGAT
GAAAACTCGTTAGAGATTTATCGAGCTGAGCTGGTGGACTTAGCGGCTCACTTTGGACTGACACAAGAGCAGCTTGAACA
TAGATCATACCGTAGTATGCAAGAAGCAAAATAG

Upstream 100 bases:

>100_bases
AGTATTGGTAATCGTTTTTTTGGCTATTGAAGCTAATAAATCAAGAAACTTTAACTCCGTCGCTACCTACTGAATATAAA
AAGGATATTATTGCTGCTGA

Downstream 100 bases:

>100_bases
AAGCCATTTACCTTGTATAGAGTATATGTAGAGACATAACACAATGAAAACGATAGGAATGTTAGGCGGTATGAGCTGGG
AGTCAACCTCCAGTTATTAC

Product: putative adenylyl cyclase CyaB

Products: 3',5'-cyclic AMP; diphosphate

Alternate protein names: Adenylate Cyclase; Adenylate Cyclase CyaB

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRTKRKVSQSKREPQPMSHEHFKGQFEVELKYRLACRDAFLAVLNSLEHEIMFEDNIESDCYFDTPTQQLLAQNKSVCIR
ECQPSGIKLWIVKGPEADRCEATNITDTNSAKSMLKTMGYQVCLEMQKQRSIYFVGKFHITLDHLAGLGDFAEFAIMTDD
ENSLEIYRAELVDLAAHFGLTQEQLEHRSYRSMQEAK

Sequences:

>Translated_197_residues
MRTKRKVSQSKREPQPMSHEHFKGQFEVELKYRLACRDAFLAVLNSLEHEIMFEDNIESDCYFDTPTQQLLAQNKSVCIR
ECQPSGIKLWIVKGPEADRCEATNITDTNSAKSMLKTMGYQVCLEMQKQRSIYFVGKFHITLDHLAGLGDFAEFAIMTDD
ENSLEIYRAELVDLAAHFGLTQEQLEHRSYRSMQEAK
>Mature_197_residues
MRTKRKVSQSKREPQPMSHEHFKGQFEVELKYRLACRDAFLAVLNSLEHEIMFEDNIESDCYFDTPTQQLLAQNKSVCIR
ECQPSGIKLWIVKGPEADRCEATNITDTNSAKSMLKTMGYQVCLEMQKQRSIYFVGKFHITLDHLAGLGDFAEFAIMTDD
ENSLEIYRAELVDLAAHFGLTQEQLEHRSYRSMQEAK

Specific function: Unknown

COG id: COG1437

COG function: function code F; Adenylate cyclase, class 2 (thermophilic)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.6.1.1

Molecular weight: Translated: 22779; Mature: 22779

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTKRKVSQSKREPQPMSHEHFKGQFEVELKYRLACRDAFLAVLNSLEHEIMFEDNIESD
CCCHHHHHHHHCCCCCCCHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCCC
CYFDTPTQQLLAQNKSVCIRECQPSGIKLWIVKGPEADRCEATNITDTNSAKSMLKTMGY
EEECCCHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
QVCLEMQKQRSIYFVGKFHITLDHLAGLGDFAEFAIMTDDENSLEIYRAELVDLAAHFGL
HHHHHHHHCCCEEEEEEEEEEHHHHCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHCCC
TQEQLEHRSYRSMQEAK
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRTKRKVSQSKREPQPMSHEHFKGQFEVELKYRLACRDAFLAVLNSLEHEIMFEDNIESD
CCCHHHHHHHHCCCCCCCHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCCC
CYFDTPTQQLLAQNKSVCIRECQPSGIKLWIVKGPEADRCEATNITDTNSAKSMLKTMGY
EEECCCHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
QVCLEMQKQRSIYFVGKFHITLDHLAGLGDFAEFAIMTDDENSLEIYRAELVDLAAHFGL
HHHHHHHHCCCEEEEEEEEEEHHHHCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHCCC
TQEQLEHRSYRSMQEAK
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP

Specific reaction: ATP = 3',5'-cyclic AMP + diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA