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The map label for this gene is ygeA [H]

Identifier: 167622930

GI number: 167622930

Start: 1218927

End: 1219619

Strand: Direct

Name: ygeA [H]

Synonym: Shal_0991

Alternate gene names: 167622930

Gene position: 1218927-1219619 (Clockwise)

Preceding gene: 167622929

Following gene: 167622932

Centisome position: 23.32

GC content: 45.45

Gene sequence:

>693_bases
ATGAAAACGATAGGAATGTTAGGCGGTATGAGCTGGGAGTCAACCTCCAGTTATTACAAGGCGGTTAATGAAGGTGTAAA
GGCAAGGCTCGGTGGTTTGCATTCTGCAAAAGTGTGCCTCTACAGTGTTGATTTCGCGGAAATTGAAAAGCTACAGCATG
CGGGTAAGTGGCAAGAGACTGCCGATATCTTGTCTGCTGCCGCTAAAAATGTTGCAGCAGGTGGTGCTGATTTTTTATTA
ATCTGCACTAATACCATGCATAAGGTGGCTGATGAGATCCAGGCTCAGCTCTCAATCCCCATCTTACATATTGCCGATGC
AACAGCAGCAAAGCTCTTGGCTAACGGTGTCACTAAAGTGGGCCTGTTAGGAACTCGTTTTACCATGGAGCAAGATTTCT
ATAAAAGCCGCCTGATAAACCAGTTTGGTATAGACGTGATTGTTCCAAATGAAGCGGAGCGCAATGTTGTGCACCATGTT
ATTTATGATGAACTATGCCGAGGCGTGATTAACCCCGCGTCAAAGCAGCAATATTTAGATATCGTTAATGACCTACATGC
GCAAGGAGCCCAAGCGGTTATTTTGGGCTGTACTGAGATAGCGTTATTGATTGGCCAACAAGATACCCAAGTGCCACTGT
ATGACACGACAGCAATTCACTGCGAATATGCGGTGGATATGGCGTTAAGCTAA

Upstream 100 bases:

>100_bases
CTGACACAAGAGCAGCTTGAACATAGATCATACCGTAGTATGCAAGAAGCAAAATAGAAGCCATTTACCTTGTATAGAGT
ATATGTAGAGACATAACACA

Downstream 100 bases:

>100_bases
GACTTTATACTGATTGGTATTATTACCGAACAAACTTATGCCGATTGCAGGTATTAAAAAACGGACTATTAAGTCCGTTT
ATTATTGATACGGGATTAAA

Product: aspartate racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKTIGMLGGMSWESTSSYYKAVNEGVKARLGGLHSAKVCLYSVDFAEIEKLQHAGKWQETADILSAAAKNVAAGGADFLL
ICTNTMHKVADEIQAQLSIPILHIADATAAKLLANGVTKVGLLGTRFTMEQDFYKSRLINQFGIDVIVPNEAERNVVHHV
IYDELCRGVINPASKQQYLDIVNDLHAQGAQAVILGCTEIALLIGQQDTQVPLYDTTAIHCEYAVDMALS

Sequences:

>Translated_230_residues
MKTIGMLGGMSWESTSSYYKAVNEGVKARLGGLHSAKVCLYSVDFAEIEKLQHAGKWQETADILSAAAKNVAAGGADFLL
ICTNTMHKVADEIQAQLSIPILHIADATAAKLLANGVTKVGLLGTRFTMEQDFYKSRLINQFGIDVIVPNEAERNVVHHV
IYDELCRGVINPASKQQYLDIVNDLHAQGAQAVILGCTEIALLIGQQDTQVPLYDTTAIHCEYAVDMALS
>Mature_230_residues
MKTIGMLGGMSWESTSSYYKAVNEGVKARLGGLHSAKVCLYSVDFAEIEKLQHAGKWQETADILSAAAKNVAAGGADFLL
ICTNTMHKVADEIQAQLSIPILHIADATAAKLLANGVTKVGLLGTRFTMEQDFYKSRLINQFGIDVIVPNEAERNVVHHV
IYDELCRGVINPASKQQYLDIVNDLHAQGAQAVILGCTEIALLIGQQDTQVPLYDTTAIHCEYAVDMALS

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=230, Percent_Identity=53.0434782608696, Blast_Score=265, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 24934; Mature: 24934

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGMLGGMSWESTSSYYKAVNEGVKARLGGLHSAKVCLYSVDFAEIEKLQHAGKWQET
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCHHHH
ADILSAAAKNVAAGGADFLLICTNTMHKVADEIQAQLSIPILHIADATAAKLLANGVTKV
HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHH
GLLGTRFTMEQDFYKSRLINQFGIDVIVPNEAERNVVHHVIYDELCRGVINPASKQQYLD
HHCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IVNDLHAQGAQAVILGCTEIALLIGQQDTQVPLYDTTAIHCEYAVDMALS
HHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCCEECCEEEEEEEEECCCCC
>Mature Secondary Structure
MKTIGMLGGMSWESTSSYYKAVNEGVKARLGGLHSAKVCLYSVDFAEIEKLQHAGKWQET
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCHHHH
ADILSAAAKNVAAGGADFLLICTNTMHKVADEIQAQLSIPILHIADATAAKLLANGVTKV
HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHH
GLLGTRFTMEQDFYKSRLINQFGIDVIVPNEAERNVVHHVIYDELCRGVINPASKQQYLD
HHCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IVNDLHAQGAQAVILGCTEIALLIGQQDTQVPLYDTTAIHCEYAVDMALS
HHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCCEECCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]