| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yjhQ [H]
Identifier: 167622928
GI number: 167622928
Start: 1217664
End: 1218200
Strand: Direct
Name: yjhQ [H]
Synonym: Shal_0989
Alternate gene names: 167622928
Gene position: 1217664-1218200 (Clockwise)
Preceding gene: 167622927
Following gene: 167622929
Centisome position: 23.3
GC content: 46.55
Gene sequence:
>537_bases ATGAATTTTACAGCGTACGATACAAATAACACCGAAGAGATCTCGCAGCTTTTCAATGAAACCTTTACCGACTCAGAAGG CGCAGACGAAGGTAAAGTCATTGGTGAATTAACCACAGAGCTTATGAGCACAACAGGCAGTGATGACCTGTTTATCTTTG TGGCGACAGATGGGGATAAGCTGGCTGGTAGCATTATGTTTTCACGGTTAACCTTTGAAACTGGCATCATTGCATTTATT TTGTCGCCAGTGGCCGTTCACCCCGAGTTTCAACGTCAGGGCGTTGGCCAGAAGCTGATTAAGTTTGGATTAGAGACCTT AGCGGAAAAGGGCGTTGAACTCGCCTTTACCTATGGCGATCCCAACTACTACTCAAAAGTCGGGTTTAAGCAGCTCAGTG AAGATGTTGTTAAGGCGCCGCTTGCTCTAACTTACCCAGAAGGCTGGCTTGGCCAATCACTTACTGCTGATGCACTGCAG CCAATAAGTGGTCGCTGCTGCTGTGTGTCTGCGCTTAATAAAGCTGAGTATTGGTAA
Upstream 100 bases:
>100_bases AATATGTATAGCCTTCGAGTATTAGCCTTCGAGTATTAGGCTTCGACTAATGATTTTAGATTAATAGTTTTAAATTAAGA AGATAGTTAGGTAAATAGAG
Downstream 100 bases:
>100_bases TCGTTTTTTTGGCTATTGAAGCTAATAAATCAAGAAACTTTAACTCCGTCGCTACCTACTGAATATAAAAAGGATATTAT TGCTGCTGAGTGAGAACTAA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNFTAYDTNNTEEISQLFNETFTDSEGADEGKVIGELTTELMSTTGSDDLFIFVATDGDKLAGSIMFSRLTFETGIIAFI LSPVAVHPEFQRQGVGQKLIKFGLETLAEKGVELAFTYGDPNYYSKVGFKQLSEDVVKAPLALTYPEGWLGQSLTADALQ PISGRCCCVSALNKAEYW
Sequences:
>Translated_178_residues MNFTAYDTNNTEEISQLFNETFTDSEGADEGKVIGELTTELMSTTGSDDLFIFVATDGDKLAGSIMFSRLTFETGIIAFI LSPVAVHPEFQRQGVGQKLIKFGLETLAEKGVELAFTYGDPNYYSKVGFKQLSEDVVKAPLALTYPEGWLGQSLTADALQ PISGRCCCVSALNKAEYW >Mature_178_residues MNFTAYDTNNTEEISQLFNETFTDSEGADEGKVIGELTTELMSTTGSDDLFIFVATDGDKLAGSIMFSRLTFETGIIAFI LSPVAVHPEFQRQGVGQKLIKFGLETLAEKGVELAFTYGDPNYYSKVGFKQLSEDVVKAPLALTYPEGWLGQSLTADALQ PISGRCCCVSALNKAEYW
Specific function: Unknown
COG id: COG3153
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1790761, Length=173, Percent_Identity=28.9017341040462, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 19467; Mature: 19467
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFTAYDTNNTEEISQLFNETFTDSEGADEGKVIGELTTELMSTTGSDDLFIFVATDGDK CCCEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCH LAGSIMFSRLTFETGIIAFILSPVAVHPEFQRQGVGQKLIKFGLETLAEKGVELAFTYGD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCEEEEEECC PNYYSKVGFKQLSEDVVKAPLALTYPEGWLGQSLTADALQPISGRCCCVSALNKAEYW CCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MNFTAYDTNNTEEISQLFNETFTDSEGADEGKVIGELTTELMSTTGSDDLFIFVATDGDK CCCEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCH LAGSIMFSRLTFETGIIAFILSPVAVHPEFQRQGVGQKLIKFGLETLAEKGVELAFTYGD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCEEEEEECC PNYYSKVGFKQLSEDVVKAPLALTYPEGWLGQSLTADALQPISGRCCCVSALNKAEYW CCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]