| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is futA1 [H]
Identifier: 167622837
GI number: 167622837
Start: 1117103
End: 1118110
Strand: Direct
Name: futA1 [H]
Synonym: Shal_0897
Alternate gene names: 167622837
Gene position: 1117103-1118110 (Clockwise)
Preceding gene: 167622836
Following gene: 167622838
Centisome position: 21.37
GC content: 42.56
Gene sequence:
>1008_bases ATGAAAATGGTAAAGAGTCTAGCTGTGATAGGACTGACTTGTTTTGCATCTATCGCCAATGCTGCTGATAGTCTAACGGT ATATTCTTATCGACAAGCCTTTTTGATAGAACCTATCTTAGAAAACTTTACTAAAGAGACTGGTATTAAAGTCGATGTTG TCTTCTCTAAAAAAGGCATTGCTGAACGTATGATGCGTGAAGGGCGCCTATCTAAGGCTGATATCGTTTTGACCTCAGAT TTTTACCGTTTGATGGAGTTGGTTGAAAAGGATCTGGTTGTGCCTGCCAGTAGTGACATTCTTAAACAAAATATCCCAGA GAAATATCGCTCGCCAGACGATGAGTGGTACGCACTTACTATGCGCGTACGTAATGTTTACTCTTCTAAAGACAGACTCG GTAAGCTTGATATTAACTATGAAGATTTAGCCGACCCTAAGTATAAGGGCAAGATCTGTACTCGTAGTGGCAAGCATCCA TACAATGTTTCATTAGTGGCCTCAATGATTGCCCATCATGGTGAGCAAGAGACTAAAACTTGGCTAGAGGGATGGAAGGC GAACCTAGCCAGAAAGCCGCAGGGTAACGATAGAGCTCAAGTTAAAGCAGTGAGTGAAGGCCTATGTGACCTCGCTATCG GTAACAGTTATTACTTGGGAAAGATGTTGCAAGATCCTAAGCAAAAGGCGTGGGCAGATGCGATTGAGATTAATTTTCCT AACCAAGATAACCGCGGATCACATATCAATGTATCGGGTATGGCGTTGGCTAAGCACTCTAAGAATCAAGCCGCAGCGAT AGAGTTGATGGAGTACCTATCCGGTGATAAAGCGCAGCAAGTATATGCTGAAGTTAATTTCGAATATCCTGTAAAAGCAG ACGTATCCCCTTCAAAGTTAGTCGCTTCCTGGGGAACATTTAAAGCCGACGATCTACCGATTTACAAATTGGCTGAATAT CATGGCGCTGCTATCAAGCTACTCGATGAAGTTAAGTTTGATCTGTAG
Upstream 100 bases:
>100_bases CTTGCTGTTTGTGTGAGTTTTGATTACTCTCGTTGCAATTGAGAATTATTATCAGTCGTTTTTCGCTGATAATTTCGATA CTTGTCTAGGGAGAAGAGTA
Downstream 100 bases:
>100_bases TTCGTGGCTCTTAAGGTTGAGCTAACCTGTTCAAGCTAGAATTAAGCAATAGCCTTGAAGTTAATCCGTTAGCTCGGTCA ACCACTGTTTCAGTTAACCT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKMVKSLAVIGLTCFASIANAADSLTVYSYRQAFLIEPILENFTKETGIKVDVVFSKKGIAERMMREGRLSKADIVLTSD FYRLMELVEKDLVVPASSDILKQNIPEKYRSPDDEWYALTMRVRNVYSSKDRLGKLDINYEDLADPKYKGKICTRSGKHP YNVSLVASMIAHHGEQETKTWLEGWKANLARKPQGNDRAQVKAVSEGLCDLAIGNSYYLGKMLQDPKQKAWADAIEINFP NQDNRGSHINVSGMALAKHSKNQAAAIELMEYLSGDKAQQVYAEVNFEYPVKADVSPSKLVASWGTFKADDLPIYKLAEY HGAAIKLLDEVKFDL
Sequences:
>Translated_335_residues MKMVKSLAVIGLTCFASIANAADSLTVYSYRQAFLIEPILENFTKETGIKVDVVFSKKGIAERMMREGRLSKADIVLTSD FYRLMELVEKDLVVPASSDILKQNIPEKYRSPDDEWYALTMRVRNVYSSKDRLGKLDINYEDLADPKYKGKICTRSGKHP YNVSLVASMIAHHGEQETKTWLEGWKANLARKPQGNDRAQVKAVSEGLCDLAIGNSYYLGKMLQDPKQKAWADAIEINFP NQDNRGSHINVSGMALAKHSKNQAAAIELMEYLSGDKAQQVYAEVNFEYPVKADVSPSKLVASWGTFKADDLPIYKLAEY HGAAIKLLDEVKFDL >Mature_335_residues MKMVKSLAVIGLTCFASIANAADSLTVYSYRQAFLIEPILENFTKETGIKVDVVFSKKGIAERMMREGRLSKADIVLTSD FYRLMELVEKDLVVPASSDILKQNIPEKYRSPDDEWYALTMRVRNVYSSKDRLGKLDINYEDLADPKYKGKICTRSGKHP YNVSLVASMIAHHGEQETKTWLEGWKANLARKPQGNDRAQVKAVSEGLCDLAIGNSYYLGKMLQDPKQKAWADAIEINFP NQDNRGSHINVSGMALAKHSKNQAAAIELMEYLSGDKAQQVYAEVNFEYPVKADVSPSKLVASWGTFKADDLPIYKLAEY HGAAIKLLDEVKFDL
Specific function: A major iron-binding protein involved in Fe(3+) uptake, probably part of a periplasmic ABC transporter complex futA1A2BC (TC 3.A.1.10.2) involved in Fe(3+) ion import (ferric iron). This protein and futA2 (slr0531) may be subunit proteins that have redund
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cellular thylakoid membrane; Lipid-anchor (Potential). Cell membrane; Lipid-anchor (Potential). Note=Localization to the periplasm was not detected in PubMed:12368463 [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37588; Mature: 37588
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMVKSLAVIGLTCFASIANAADSLTVYSYRQAFLIEPILENFTKETGIKVDVVFSKKGI CCHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH AERMMREGRLSKADIVLTSDFYRLMELVEKDLVVPASSDILKQNIPEKYRSPDDEWYALT HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHCCCCCHHEEHH MRVRNVYSSKDRLGKLDINYEDLADPKYKGKICTRSGKHPYNVSLVASMIAHHGEQETKT HHHHHHHHCHHCCCEECCCHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCHHHHH WLEGWKANLARKPQGNDRAQVKAVSEGLCDLAIGNSYYLGKMLQDPKQKAWADAIEINFP HHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHCCHHHHHHHCEEEEECC NQDNRGSHINVSGMALAKHSKNQAAAIELMEYLSGDKAQQVYAEVNFEYPVKADVSPSKL CCCCCCCEEEECCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHEECCCCCCCCCCCHHHH VASWGTFKADDLPIYKLAEYHGAAIKLLDEVKFDL HHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MKMVKSLAVIGLTCFASIANAADSLTVYSYRQAFLIEPILENFTKETGIKVDVVFSKKGI CCHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH AERMMREGRLSKADIVLTSDFYRLMELVEKDLVVPASSDILKQNIPEKYRSPDDEWYALT HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHCCCCCHHEEHH MRVRNVYSSKDRLGKLDINYEDLADPKYKGKICTRSGKHPYNVSLVASMIAHHGEQETKT HHHHHHHHCHHCCCEECCCHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCHHHHH WLEGWKANLARKPQGNDRAQVKAVSEGLCDLAIGNSYYLGKMLQDPKQKAWADAIEINFP HHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHCCHHHHHHHCEEEEECC NQDNRGSHINVSGMALAKHSKNQAAAIELMEYLSGDKAQQVYAEVNFEYPVKADVSPSKL CCCCCCCEEEECCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHEECCCCCCCCCCCHHHH VASWGTFKADDLPIYKLAEYHGAAIKLLDEVKFDL HHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]