Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is fbpB2 [H]

Identifier: 167622838

GI number: 167622838

Start: 1118278

End: 1119909

Strand: Direct

Name: fbpB2 [H]

Synonym: Shal_0898

Alternate gene names: 167622838

Gene position: 1118278-1119909 (Clockwise)

Preceding gene: 167622837

Following gene: 167622839

Centisome position: 21.39

GC content: 46.63

Gene sequence:

>1632_bases
ATGGTTTTAGGCTTAGCTAAAGGCTGGTCTGTAGCAGGGTACACCTTGGCACTACTGATTATTATGCCGCTTATCGCGCT
TATAAGTCAGTCGCTGATGCCAGATGAAGCCGTATTTCCCCACCTTTTTGATACCGTTTTACCCACCTATATCAGCAACA
GCCTATGGCTGATATTTTGGGTGGTGATAGGCTCGCTTATTATTGCTATTCCTGCAGCTTGGCTGGTGGCTAAGTGTCAG
TTTCCTGGCCGAAGCGTTTTCCAATGGGCGCTATTGTTACCTCTAGCAATGCCCGCCTACGTAGTGGCCTACGTGTATAC
CGACCTATTTGATTATGCAGGTCCTGTGCAGCGTAGCTTACGCAGCTTTTTCGGTTGGCAGACACCTCAAGATTATTACT
TCCCTGAAGTCCGTTCATTAGGTGGCGCTTCAATCATGTTGGCCTTGGTGCTGTTCCCCTATATCTACCTATTAGCCCGT
ACCGCTTTTATGGAGCAATCTACTAGCCTTAGCCAAGCCACAAGGGTGATGGGTTGTGGTCCCTGGAAGAGTTTCTGGCG
ATTAAGCTTACCTATGGCGCGTCCAGCATTAGCCGTTGGCGCGGCGTTAGTGGCCATGGAGACGGCGGCGGACTTTGCCA
CAGTCAGTTATTTTGCGGTGCCAACATTGACTACGGCTGTTTACGATACCTGGTTTGAATATGGCAGTTTGACTGCAGCA
GCTAAGCTTTCAACCATCATGTTATTAGTGATTTTTGCCATGGTGGGTTTTGAGCGTTTCGCGAGGCGAAAACAAAAACT
GTTTCAGAAGCCGTCTGCGCCGGGTGAGCTCGATGTTTATTCCTTATCGGGTATTAAGGCATTGGCTGCGACAGGCTATT
GCAGTGCACTGCTCACACTCGCTTTCTTACTGCCCTTCATCATACTCGTGAAATACGCTTATGGGTATTTTGCACAAAGC
TGGAATCAAGAGTTCTTTGAATATAGCTTCAATAGTTTATGGATTTCTGTGTTAGTGAGCCTTATCTGTGTTGCCATTGG
TATTTTGCTGATGTTTATTCGTCGTATTAGTCCTAGACGAGCAGATGTTCTTCCTTCTCGATTAGCATCTACGGGCTATG
CTCTACCCGGTACCGTATTAGCTATTGGTATCTTGGTCCCTTTTACTCACTTAGATTTTGCGATAAATGATCTGGTTGAA
TATTTTGGTTTTGAGGGCCCCGGGCTTATTTTAACCGGTAGCAGCTTCATTATCGTGTGTGCTTTTTGTATTCGCTTTGC
TGCGATTGCTATCGGCAGCATAGAGAACAGTTATAAACGGATCTCACCGTCATTGGATATGGCGGGGATCACTATGGGCC
TTAAGCCTGTTGGGCTGTTACGACGGGTGCATATACCTTTGCTGAGAAAAGGGGTTTTTGCAGGGCTATTGCTGGTATTT
ATTGAGTGTATGAAGGAGTTACCAGCAGCGCTGCTGTTAAGGCCAATAGGCTTTGAAAACTTAGCGACGTATGTATTTCA
GTTTGTATCCGACGAGCAGTTAGAACACGGAGCGCTGGCCGCGATCGTGATTGTATTGGTCGGTCTAATTCCGCTTATTT
ACCTTAACCGTTCCTTGGAGCACGATAATTAA

Upstream 100 bases:

>100_bases
GTTAGCTCGGTCAACCACTGTTTCAGTTAACCTATCTTAGATAGGTTTTCTTGTTTTTATCAAAGTACACGGATGTATTA
TTTTTTAGGTAGTTAATCTT

Downstream 100 bases:

>100_bases
TATGGCCACACTACAAGTACAGCGGGTCGTTAGCGACTACCAAGGGCAAGTCGTTTTAAAGGGCTTAGATTTAACCGTTG
AGAAAGGAGAAATCGTGGCA

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MVLGLAKGWSVAGYTLALLIIMPLIALISQSLMPDEAVFPHLFDTVLPTYISNSLWLIFWVVIGSLIIAIPAAWLVAKCQ
FPGRSVFQWALLLPLAMPAYVVAYVYTDLFDYAGPVQRSLRSFFGWQTPQDYYFPEVRSLGGASIMLALVLFPYIYLLAR
TAFMEQSTSLSQATRVMGCGPWKSFWRLSLPMARPALAVGAALVAMETAADFATVSYFAVPTLTTAVYDTWFEYGSLTAA
AKLSTIMLLVIFAMVGFERFARRKQKLFQKPSAPGELDVYSLSGIKALAATGYCSALLTLAFLLPFIILVKYAYGYFAQS
WNQEFFEYSFNSLWISVLVSLICVAIGILLMFIRRISPRRADVLPSRLASTGYALPGTVLAIGILVPFTHLDFAINDLVE
YFGFEGPGLILTGSSFIIVCAFCIRFAAIAIGSIENSYKRISPSLDMAGITMGLKPVGLLRRVHIPLLRKGVFAGLLLVF
IECMKELPAALLLRPIGFENLATYVFQFVSDEQLEHGALAAIVIVLVGLIPLIYLNRSLEHDN

Sequences:

>Translated_543_residues
MVLGLAKGWSVAGYTLALLIIMPLIALISQSLMPDEAVFPHLFDTVLPTYISNSLWLIFWVVIGSLIIAIPAAWLVAKCQ
FPGRSVFQWALLLPLAMPAYVVAYVYTDLFDYAGPVQRSLRSFFGWQTPQDYYFPEVRSLGGASIMLALVLFPYIYLLAR
TAFMEQSTSLSQATRVMGCGPWKSFWRLSLPMARPALAVGAALVAMETAADFATVSYFAVPTLTTAVYDTWFEYGSLTAA
AKLSTIMLLVIFAMVGFERFARRKQKLFQKPSAPGELDVYSLSGIKALAATGYCSALLTLAFLLPFIILVKYAYGYFAQS
WNQEFFEYSFNSLWISVLVSLICVAIGILLMFIRRISPRRADVLPSRLASTGYALPGTVLAIGILVPFTHLDFAINDLVE
YFGFEGPGLILTGSSFIIVCAFCIRFAAIAIGSIENSYKRISPSLDMAGITMGLKPVGLLRRVHIPLLRKGVFAGLLLVF
IECMKELPAALLLRPIGFENLATYVFQFVSDEQLEHGALAAIVIVLVGLIPLIYLNRSLEHDN
>Mature_543_residues
MVLGLAKGWSVAGYTLALLIIMPLIALISQSLMPDEAVFPHLFDTVLPTYISNSLWLIFWVVIGSLIIAIPAAWLVAKCQ
FPGRSVFQWALLLPLAMPAYVVAYVYTDLFDYAGPVQRSLRSFFGWQTPQDYYFPEVRSLGGASIMLALVLFPYIYLLAR
TAFMEQSTSLSQATRVMGCGPWKSFWRLSLPMARPALAVGAALVAMETAADFATVSYFAVPTLTTAVYDTWFEYGSLTAA
AKLSTIMLLVIFAMVGFERFARRKQKLFQKPSAPGELDVYSLSGIKALAATGYCSALLTLAFLLPFIILVKYAYGYFAQS
WNQEFFEYSFNSLWISVLVSLICVAIGILLMFIRRISPRRADVLPSRLASTGYALPGTVLAIGILVPFTHLDFAINDLVE
YFGFEGPGLILTGSSFIIVCAFCIRFAAIAIGSIENSYKRISPSLDMAGITMGLKPVGLLRRVHIPLLRKGVFAGLLLVF
IECMKELPAALLLRPIGFENLATYVFQFVSDEQLEHGALAAIVIVLVGLIPLIYLNRSLEHDN

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 59904; Mature: 59904

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLGLAKGWSVAGYTLALLIIMPLIALISQSLMPDEAVFPHLFDTVLPTYISNSLWLIFW
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
VVIGSLIIAIPAAWLVAKCQFPGRSVFQWALLLPLAMPAYVVAYVYTDLFDYAGPVQRSL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RSFFGWQTPQDYYFPEVRSLGGASIMLALVLFPYIYLLARTAFMEQSTSLSQATRVMGCG
HHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PWKSFWRLSLPMARPALAVGAALVAMETAADFATVSYFAVPTLTTAVYDTWFEYGSLTAA
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AKLSTIMLLVIFAMVGFERFARRKQKLFQKPSAPGELDVYSLSGIKALAATGYCSALLTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
AFLLPFIILVKYAYGYFAQSWNQEFFEYSFNSLWISVLVSLICVAIGILLMFIRRISPRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ADVLPSRLASTGYALPGTVLAIGILVPFTHLDFAINDLVEYFGFEGPGLILTGSSFIIVC
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHH
AFCIRFAAIAIGSIENSYKRISPSLDMAGITMGLKPVGLLRRVHIPLLRKGVFAGLLLVF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IECMKELPAALLLRPIGFENLATYVFQFVSDEQLEHGALAAIVIVLVGLIPLIYLNRSLE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HDN
CCC
>Mature Secondary Structure
MVLGLAKGWSVAGYTLALLIIMPLIALISQSLMPDEAVFPHLFDTVLPTYISNSLWLIFW
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
VVIGSLIIAIPAAWLVAKCQFPGRSVFQWALLLPLAMPAYVVAYVYTDLFDYAGPVQRSL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RSFFGWQTPQDYYFPEVRSLGGASIMLALVLFPYIYLLARTAFMEQSTSLSQATRVMGCG
HHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PWKSFWRLSLPMARPALAVGAALVAMETAADFATVSYFAVPTLTTAVYDTWFEYGSLTAA
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AKLSTIMLLVIFAMVGFERFARRKQKLFQKPSAPGELDVYSLSGIKALAATGYCSALLTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
AFLLPFIILVKYAYGYFAQSWNQEFFEYSFNSLWISVLVSLICVAIGILLMFIRRISPRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ADVLPSRLASTGYALPGTVLAIGILVPFTHLDFAINDLVEYFGFEGPGLILTGSSFIIVC
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHH
AFCIRFAAIAIGSIENSYKRISPSLDMAGITMGLKPVGLLRRVHIPLLRKGVFAGLLLVF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IECMKELPAALLLRPIGFENLATYVFQFVSDEQLEHGALAAIVIVLVGLIPLIYLNRSLE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HDN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 7927717 [H]