| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is fpr [H]
Identifier: 167622836
GI number: 167622836
Start: 1116145
End: 1116894
Strand: Direct
Name: fpr [H]
Synonym: Shal_0896
Alternate gene names: 167622836
Gene position: 1116145-1116894 (Clockwise)
Preceding gene: 167622834
Following gene: 167622837
Centisome position: 21.35
GC content: 47.47
Gene sequence:
>750_bases ATGTGGATTGAAGGGCAGGTCATCGAGCGGCGAGATTGGAACGACAAGCTGTTCTCTCTAAAAATTAAGGTCGACATTGG AGACTTTAAAGCGGGACAGTTTATTAAGTTAAGTCAGGTCGTGAATGATAAGAGGATCGGCCGGGCATACTCACTCGTTA ATCCGCCAGGGTGTGATTATATTGAGGTGTTGGCGGTGGCTGTTGAGGAGGGGCTACTATCACCTAACCTACAAGCGCTA AATATTGGCGATGTTATTGATGTTGCCACCAAAGCCTCGGGGTTTATGACACTCGATGAACTGCCTAAAGATGAGCACAG GGGAAGGCATCTGTGGTTTTTAGCCACAGGTACGGCAGTGGGGCCTTTTATCTCGATGATGAATACCTGCGAGCCTTGGA AAACCTATGAAAGGTTAGTATTAGTCTATGGGGTGCGTAAAGTTGAAGACTTGGCGTATCTTGAGCAGCTGAAGGCTTTT GAAGCGAGATACCCTGAGCAATTTAGACTGGTATTATCGGTAACTCGTGAACAGTATCACGGCGCTTTAATGAGTCGTAT CCCCGACGGCATCATCTCTGGAGATCTAGAAGCGAAAGCTGGATTAAGGCTTAGCCCAAAGGATTCGCAAGTGATGATCT GTGGTAATCCTGAGATGATCATCGCATCACAACAAGTACTTAGCGCAAGGGGATTAACAAAGAATCTGCGCCGAGCACCC GGGCAGGTGACCGTTGAGAGATATTGGTGA
Upstream 100 bases:
>100_bases CGAGTATTTACTTGTATGAAATATCAACAGCGTTTAGATTAATCTTTGTGAAGCCGGAATAAAAGTTTATGCTGAATTAA ACGAAACGGGGGAGTGTCTT
Downstream 100 bases:
>100_bases TCTAACATCTTCGGTTAATAAGACATTACGTCTAGCTAAGGTAGTGTAAGTTTAGTGTTTGCTCATGTAGATCAAGTTGT CATTTTTGAGTTAAAAATAT
Product: oxidoreductase FAD/NAD(P)-binding subunit
Products: NA
Alternate protein names: FNR; DA1; Flavodoxin reductase; FLDR; FLXR; Methyl viologen resistance protein A [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MWIEGQVIERRDWNDKLFSLKIKVDIGDFKAGQFIKLSQVVNDKRIGRAYSLVNPPGCDYIEVLAVAVEEGLLSPNLQAL NIGDVIDVATKASGFMTLDELPKDEHRGRHLWFLATGTAVGPFISMMNTCEPWKTYERLVLVYGVRKVEDLAYLEQLKAF EARYPEQFRLVLSVTREQYHGALMSRIPDGIISGDLEAKAGLRLSPKDSQVMICGNPEMIIASQQVLSARGLTKNLRRAP GQVTVERYW
Sequences:
>Translated_249_residues MWIEGQVIERRDWNDKLFSLKIKVDIGDFKAGQFIKLSQVVNDKRIGRAYSLVNPPGCDYIEVLAVAVEEGLLSPNLQAL NIGDVIDVATKASGFMTLDELPKDEHRGRHLWFLATGTAVGPFISMMNTCEPWKTYERLVLVYGVRKVEDLAYLEQLKAF EARYPEQFRLVLSVTREQYHGALMSRIPDGIISGDLEAKAGLRLSPKDSQVMICGNPEMIIASQQVLSARGLTKNLRRAP GQVTVERYW >Mature_249_residues MWIEGQVIERRDWNDKLFSLKIKVDIGDFKAGQFIKLSQVVNDKRIGRAYSLVNPPGCDYIEVLAVAVEEGLLSPNLQAL NIGDVIDVATKASGFMTLDELPKDEHRGRHLWFLATGTAVGPFISMMNTCEPWKTYERLVLVYGVRKVEDLAYLEQLKAF EARYPEQFRLVLSVTREQYHGALMSRIPDGIISGDLEAKAGLRLSPKDSQVMICGNPEMIIASQQVLSARGLTKNLRRAP GQVTVERYW
Specific function: Transports electrons between flavodoxin or ferredoxin and NADPH. Involved in the reductive activation of cobalamin- independent methionine synthase, pyruvate formate lyase and anaerobic ribonucleotide reductase. Also protects against superoxide radicals d
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790359, Length=249, Percent_Identity=42.9718875502008, Blast_Score=209, Evalue=9e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017927 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.2 [H]
Molecular weight: Translated: 28071; Mature: 28071
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWIEGQVIERRDWNDKLFSLKIKVDIGDFKAGQFIKLSQVVNDKRIGRAYSLVNPPGCDY CCCCCEEEECCCCCCEEEEEEEEEEECCCCCCCEEEHHHHHCHHHCCCEEECCCCCCCCH IEVLAVAVEEGLLSPNLQALNIGDVIDVATKASGFMTLDELPKDEHRGRHLWFLATGTAV HHHHHHHHHHCCCCCCCEEEECCHHHHHHHCCCCCEEHHHCCCHHHCCCEEEEEEECCHH GPFISMMNTCEPWKTYERLVLVYGVRKVEDLAYLEQLKAFEARYPEQFRLVLSVTREQYH HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GALMSRIPDGIISGDLEAKAGLRLSPKDSQVMICGNPEMIIASQQVLSARGLTKNLRRAP HHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCEEEEHHHHHHHCCHHHHHHHCC GQVTVERYW CCEEEEECC >Mature Secondary Structure MWIEGQVIERRDWNDKLFSLKIKVDIGDFKAGQFIKLSQVVNDKRIGRAYSLVNPPGCDY CCCCCEEEECCCCCCEEEEEEEEEEECCCCCCCEEEHHHHHCHHHCCCEEECCCCCCCCH IEVLAVAVEEGLLSPNLQALNIGDVIDVATKASGFMTLDELPKDEHRGRHLWFLATGTAV HHHHHHHHHHCCCCCCCEEEECCHHHHHHHCCCCCEEHHHCCCHHHCCCEEEEEEECCHH GPFISMMNTCEPWKTYERLVLVYGVRKVEDLAYLEQLKAFEARYPEQFRLVLSVTREQYH HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GALMSRIPDGIISGDLEAKAGLRLSPKDSQVMICGNPEMIIASQQVLSARGLTKNLRRAP HHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCEEEEHHHHHHHCCHHHHHHHCC GQVTVERYW CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8449868; 8346018; 9278503; 1400248; 2834327; 7961651; 9149148 [H]