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The map label for this gene is 167622792

Identifier: 167622792

GI number: 167622792

Start: 1059460

End: 1061679

Strand: Reverse

Name: 167622792

Synonym: Shal_0852

Alternate gene names: NA

Gene position: 1061679-1059460 (Counterclockwise)

Preceding gene: 167622793

Following gene: 167622783

Centisome position: 20.31

GC content: 44.59

Gene sequence:

>2220_bases
ATGCTAACCCGTAAACTTCCCCTATTAGTCAGTGCTCAAGGGATCCATTGGTCTCAACAGCGCATCTTAGCCGCCGCTAG
CCAGATCTGTATGCTGCTAGTTTCGGTGATCATTCTGACTAACATCATTATCACTTTAGGTGAAAGACGTTTGCAGGAAG
ATTGGGCAACCCAGCGCTACAGTGAGCTTCAGGCGGTTGGTGCGCTTATTTCAGATAAAGTGTCATTCCAACAGTTTAGA
ACTCAGATGGTTGCAAAATCTGAACGGCTAAAACACTACCTTAGCCTTCCCACCTCAGAAAACCAGCAAAAGCTACTTAG
TAACTGGGACATTCTAGTCGATAATGTCCCTGAGCTTTTAGGGATCGCGCTGTTCGATCCACAAGGGCAGCACAAATTTG
CAACCAGTAATGATTTTGGTGAAGACAACCTACCATCGGCTTTACTCGGTGGAACCAGAAATATGGGAGGGAATGAAATA
TATACCTCGCCATTGGAATTTACGCCAATTGATGGCCAGCTTGAGCCCTACCTATACCAGTTTGCATGGCTCGAGAACCC
AGATCAGAGCATTCGTGGCTACCTTGTCACCTATAGCTCTATGTCTAAAATGCTTAAAGCGATTAAACCCGCCTATTCGA
GCAAGCAAGCCCCCTTGATGATGCTCGATACCCAAGGTTTGCTCTATGCTGGTGCACAACAAAAACCTAGCATTAGTCGC
TTACCGGAAACCATGGGCGGTAGCCTAAAGCTGTCTTACCCCGCACTTTGGCGCAAAATGGCAATGAGCAATTTTGGTCA
GTTCCATGGTGATATCGCGACTTTCGTTTATTTGAAAGTTGAGCTAACAACCCAATATGAAACCCGCAGAGAGTACTTTT
TACTGTCCTACATTAAGAACGAGGACATTGCAGCCAAGTTCTCTCAATGGCGAAATATTCTTATGATAGGGGCCACCCTA
CTCACGCTACTTGCCTGCTTAGTGATCTTTCTGGCTCATCTTTATCGATTAGTGCAGCGCTCTCGAGAGTTCAGTATTGA
TCTGACTAATCGCCTTTTTAATAGCGATTTAGGCTGTATCATCGCCAACGATAGCGGCCGGGTACTCACTGCTAACACTT
CAGCATCAAAATTACTTTCACTGCCTATCGATGAACTCTCAGATCGCAGCTTACAGCGTATTTTGAATTTAGATGATGAC
CAATACCTTGATTTTATTGATACTGTTGACAAAACAGAGCATTGGGAATGCGAGCTATACACAGATACATCGCCTCATCT
TTGGCTGCAGATCCTTGTGCGTATAGAAGTCAGTAAAAATAAAAAGCAGCGCTATATGCTGGTCACTTTCCAAGATATCA
GTGAGCTCAAGCATAGCCAAGAGCAGGCAATGTTGAGTCACAAGCTCAACGAAGGCCCTGTAGCGAGTGTTCTTACCGAC
GCCAAAGGCAACGTGGTTAAGTCTAATGAAGCATTTAACACCTTACTACAGATTGAAGACAGCCAAGCACTCAATATTAG
TGGCCTATTAAGCGAAGACTTTAGTAACCAATGGCCGCAAATAGCCCAAAAGCTGCAGATTGAAGGGGGCTGGAAAGGTC
AGGTATTTGCAATTGATAACCATGGTCAAAACAGTTGTTTGCAGGCCACATTAAAAGGTCTTCTAGATAGCTCAGGTGAA
CTCGAGTTTATTCTTTTTAGTTTTGAGCAAGCAGTCGTTAAGCAGACCAACAGAGAGGACGGCAGCTTAGTACCGCATCG
AAGCACTATTTTCAACCATAAAAGTGACTTAGAGCGTTACTTCAGTAATTTGAGCCAGCACTGTAAAGACTTTACTAGCC
TGCTGATGATCGATATTAGTGCCGAGGATATGTTGAGTCATATGAGTGATATTGGCCAACTAGAATCGCGTCAAAAAGAA
GTTGAGTTCCACCTACTACGCGACCTGCCTCATCGCTACCAGATGTCCCATTGGCAGCTGGGTAAGTTGATTGTCGTATT
GCCCGATACCGATTCAGATCAGGCGCATTACTTTGCCATTGAGACCTTAAATCGCCTTAATGATAACAGCTTAGGAGAAG
GGATTTGTATCGGTATAGCCTCTTATCAAGCAGGGCAAAGCCTAGAGCAACTGATAGCTAATGCAGAAGTTGCACTTAAA
CGCGCTAAACAGACTGGTGACCAGAATATCTGCCAAGCATATACCAGACTGCTCGTTTAA

Upstream 100 bases:

>100_bases
AATACAAGATTAATTCGATGATATGCTATTAACAAACGCTATCTCAGATGTTAATTCGTGTTAAGATGCTGAGCATAATA
ACTGTAATAAAAATCGATAC

Downstream 100 bases:

>100_bases
AACGGCTAGTTGTCCAGACTGTTTATCAGCCCTCACTCTACCAGAGGGCTTTTACCCTTAAGCTCCTCCTTAAAAGGGGC
CTCTTCCATGGTTGCCACTC

Product: putative diguanylate cyclase

Products: NA

Alternate protein names: Diguanylate Cyclase; PAS/PAC Sensor Protein

Number of amino acids: Translated: 739; Mature: 739

Protein sequence:

>739_residues
MLTRKLPLLVSAQGIHWSQQRILAAASQICMLLVSVIILTNIIITLGERRLQEDWATQRYSELQAVGALISDKVSFQQFR
TQMVAKSERLKHYLSLPTSENQQKLLSNWDILVDNVPELLGIALFDPQGQHKFATSNDFGEDNLPSALLGGTRNMGGNEI
YTSPLEFTPIDGQLEPYLYQFAWLENPDQSIRGYLVTYSSMSKMLKAIKPAYSSKQAPLMMLDTQGLLYAGAQQKPSISR
LPETMGGSLKLSYPALWRKMAMSNFGQFHGDIATFVYLKVELTTQYETRREYFLLSYIKNEDIAAKFSQWRNILMIGATL
LTLLACLVIFLAHLYRLVQRSREFSIDLTNRLFNSDLGCIIANDSGRVLTANTSASKLLSLPIDELSDRSLQRILNLDDD
QYLDFIDTVDKTEHWECELYTDTSPHLWLQILVRIEVSKNKKQRYMLVTFQDISELKHSQEQAMLSHKLNEGPVASVLTD
AKGNVVKSNEAFNTLLQIEDSQALNISGLLSEDFSNQWPQIAQKLQIEGGWKGQVFAIDNHGQNSCLQATLKGLLDSSGE
LEFILFSFEQAVVKQTNREDGSLVPHRSTIFNHKSDLERYFSNLSQHCKDFTSLLMIDISAEDMLSHMSDIGQLESRQKE
VEFHLLRDLPHRYQMSHWQLGKLIVVLPDTDSDQAHYFAIETLNRLNDNSLGEGICIGIASYQAGQSLEQLIANAEVALK
RAKQTGDQNICQAYTRLLV

Sequences:

>Translated_739_residues
MLTRKLPLLVSAQGIHWSQQRILAAASQICMLLVSVIILTNIIITLGERRLQEDWATQRYSELQAVGALISDKVSFQQFR
TQMVAKSERLKHYLSLPTSENQQKLLSNWDILVDNVPELLGIALFDPQGQHKFATSNDFGEDNLPSALLGGTRNMGGNEI
YTSPLEFTPIDGQLEPYLYQFAWLENPDQSIRGYLVTYSSMSKMLKAIKPAYSSKQAPLMMLDTQGLLYAGAQQKPSISR
LPETMGGSLKLSYPALWRKMAMSNFGQFHGDIATFVYLKVELTTQYETRREYFLLSYIKNEDIAAKFSQWRNILMIGATL
LTLLACLVIFLAHLYRLVQRSREFSIDLTNRLFNSDLGCIIANDSGRVLTANTSASKLLSLPIDELSDRSLQRILNLDDD
QYLDFIDTVDKTEHWECELYTDTSPHLWLQILVRIEVSKNKKQRYMLVTFQDISELKHSQEQAMLSHKLNEGPVASVLTD
AKGNVVKSNEAFNTLLQIEDSQALNISGLLSEDFSNQWPQIAQKLQIEGGWKGQVFAIDNHGQNSCLQATLKGLLDSSGE
LEFILFSFEQAVVKQTNREDGSLVPHRSTIFNHKSDLERYFSNLSQHCKDFTSLLMIDISAEDMLSHMSDIGQLESRQKE
VEFHLLRDLPHRYQMSHWQLGKLIVVLPDTDSDQAHYFAIETLNRLNDNSLGEGICIGIASYQAGQSLEQLIANAEVALK
RAKQTGDQNICQAYTRLLV
>Mature_739_residues
MLTRKLPLLVSAQGIHWSQQRILAAASQICMLLVSVIILTNIIITLGERRLQEDWATQRYSELQAVGALISDKVSFQQFR
TQMVAKSERLKHYLSLPTSENQQKLLSNWDILVDNVPELLGIALFDPQGQHKFATSNDFGEDNLPSALLGGTRNMGGNEI
YTSPLEFTPIDGQLEPYLYQFAWLENPDQSIRGYLVTYSSMSKMLKAIKPAYSSKQAPLMMLDTQGLLYAGAQQKPSISR
LPETMGGSLKLSYPALWRKMAMSNFGQFHGDIATFVYLKVELTTQYETRREYFLLSYIKNEDIAAKFSQWRNILMIGATL
LTLLACLVIFLAHLYRLVQRSREFSIDLTNRLFNSDLGCIIANDSGRVLTANTSASKLLSLPIDELSDRSLQRILNLDDD
QYLDFIDTVDKTEHWECELYTDTSPHLWLQILVRIEVSKNKKQRYMLVTFQDISELKHSQEQAMLSHKLNEGPVASVLTD
AKGNVVKSNEAFNTLLQIEDSQALNISGLLSEDFSNQWPQIAQKLQIEGGWKGQVFAIDNHGQNSCLQATLKGLLDSSGE
LEFILFSFEQAVVKQTNREDGSLVPHRSTIFNHKSDLERYFSNLSQHCKDFTSLLMIDISAEDMLSHMSDIGQLESRQKE
VEFHLLRDLPHRYQMSHWQLGKLIVVLPDTDSDQAHYFAIETLNRLNDNSLGEGICIGIASYQAGQSLEQLIANAEVALK
RAKQTGDQNICQAYTRLLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83687; Mature: 83687

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRKLPLLVSAQGIHWSQQRILAAASQICMLLVSVIILTNIIITLGERRLQEDWATQRY
CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SELQAVGALISDKVSFQQFRTQMVAKSERLKHYLSLPTSENQQKLLSNWDILVDNVPELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHCCHHHHH
GIALFDPQGQHKFATSNDFGEDNLPSALLGGTRNMGGNEIYTSPLEFTPIDGQLEPYLYQ
EEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCEECCCCCCCCHHHHH
FAWLENPDQSIRGYLVTYSSMSKMLKAIKPAYSSKQAPLMMLDTQGLLYAGAQQKPSISR
HHHCCCCCCCHHEEEEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCCCCCHHH
LPETMGGSLKLSYPALWRKMAMSNFGQFHGDIATFVYLKVELTTQYETRREYFLLSYIKN
CHHHCCCCEEECHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECHHHHHHHEEEHHHCC
EDIAAKFSQWRNILMIGATLLTLLACLVIFLAHLYRLVQRSREFSIDLTNRLFNSDLGCI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCEE
IANDSGRVLTANTSASKLLSLPIDELSDRSLQRILNLDDDQYLDFIDTVDKTEHWECELY
EECCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEE
TDTSPHLWLQILVRIEVSKNKKQRYMLVTFQDISELKHSQEQAMLSHKLNEGPVASVLTD
ECCCHHHHHHHHHHEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC
AKGNVVKSNEAFNTLLQIEDSQALNISGLLSEDFSNQWPQIAQKLQIEGGWKGQVFAIDN
CCCCEEECCHHHHHHEEECCCCCEEEHHHHHHHHCCHHHHHHHHEECCCCCCEEEEEECC
HGQNSCLQATLKGLLDSSGELEFILFSFEQAVVKQTNREDGSLVPHRSTIFNHKSDLERY
CCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHH
FSNLSQHCKDFTSLLMIDISAEDMLSHMSDIGQLESRQKEVEFHLLRDLPHRYQMSHWQL
HHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEC
GKLIVVLPDTDSDQAHYFAIETLNRLNDNSLGEGICIGIASYQAGQSLEQLIANAEVALK
CCEEEEECCCCCCCCCEEHHHHHHHCCCCCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHH
RAKQTGDQNICQAYTRLLV
HHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLTRKLPLLVSAQGIHWSQQRILAAASQICMLLVSVIILTNIIITLGERRLQEDWATQRY
CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SELQAVGALISDKVSFQQFRTQMVAKSERLKHYLSLPTSENQQKLLSNWDILVDNVPELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHCCHHHHH
GIALFDPQGQHKFATSNDFGEDNLPSALLGGTRNMGGNEIYTSPLEFTPIDGQLEPYLYQ
EEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCEECCCCCCCCHHHHH
FAWLENPDQSIRGYLVTYSSMSKMLKAIKPAYSSKQAPLMMLDTQGLLYAGAQQKPSISR
HHHCCCCCCCHHEEEEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCCCCCHHH
LPETMGGSLKLSYPALWRKMAMSNFGQFHGDIATFVYLKVELTTQYETRREYFLLSYIKN
CHHHCCCCEEECHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECHHHHHHHEEEHHHCC
EDIAAKFSQWRNILMIGATLLTLLACLVIFLAHLYRLVQRSREFSIDLTNRLFNSDLGCI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCEE
IANDSGRVLTANTSASKLLSLPIDELSDRSLQRILNLDDDQYLDFIDTVDKTEHWECELY
EECCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEE
TDTSPHLWLQILVRIEVSKNKKQRYMLVTFQDISELKHSQEQAMLSHKLNEGPVASVLTD
ECCCHHHHHHHHHHEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC
AKGNVVKSNEAFNTLLQIEDSQALNISGLLSEDFSNQWPQIAQKLQIEGGWKGQVFAIDN
CCCCEEECCHHHHHHEEECCCCCEEEHHHHHHHHCCHHHHHHHHEECCCCCCEEEEEECC
HGQNSCLQATLKGLLDSSGELEFILFSFEQAVVKQTNREDGSLVPHRSTIFNHKSDLERY
CCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHH
FSNLSQHCKDFTSLLMIDISAEDMLSHMSDIGQLESRQKEVEFHLLRDLPHRYQMSHWQL
HHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEC
GKLIVVLPDTDSDQAHYFAIETLNRLNDNSLGEGICIGIASYQAGQSLEQLIANAEVALK
CCEEEEECCCCCCCCCEEHHHHHHHCCCCCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHH
RAKQTGDQNICQAYTRLLV
HHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA