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The map label for this gene is 167622793

Identifier: 167622793

GI number: 167622793

Start: 1061975

End: 1062583

Strand: Reverse

Name: 167622793

Synonym: Shal_0853

Alternate gene names: NA

Gene position: 1062583-1061975 (Counterclockwise)

Preceding gene: 167622794

Following gene: 167622792

Centisome position: 20.33

GC content: 47.13

Gene sequence:

>609_bases
ATGACCGACAATCAACCTACCCTCGTTTACGATATACGCGATAGCCGCTACCTCAATATCACTGGTCGCTGCACCTTGAG
ATGTCAATTCTGCCCCAAGCATAATGGCAGCAAACAGGTTCATCAATATCAGCTTGATCTCAATCGTCAGCCAAAAGCCG
ACGAATTGATTGCGCAATTGGGTGAAGTGTCAAAGTTCGATGAATATGTATTCTGCGGATATGGTGAACCCACGCTTAAT
CTAACAAGCTTGCTTGATGTCGCTAAAGAGATTAAGCAGCAAGGTGGCAAGGTACGCGTGAACACCGATGGGCTCGGCAA
CCTATTCCATAAACGCAATATTCTGCCTGAGCTGGCCGCCTGTGTTGATAGCTTATCTATTTCGCTCAATGCCGATACCG
AAGCGCTTTACCTACAACATTGCCGTCCGAAACTAGCTGGTGCTTACCCCGCCTTACTGGAATTTATTAAACTTGCACCG
CAATTTATTGATGACGTCCAAGTCTCGGCGATCAATGGTCTAGAGGGCGTCGATATCGATGCATGCCGTGCACTTGTCGA
AGCTAGAGGCGCTAGCTTTAAACAAAGAGAGCTCGATATCGTTGGTTAA

Upstream 100 bases:

>100_bases
TGACAGCAATGCCAATCAGTATCAGAATCCGATCCAGCAAACAGATTTTAATCAACTTAGCCGTTATGCTTGTCGGTCTT
ATTTTCAACAAGACGCCCTC

Downstream 100 bases:

>100_bases
TCTCTGCAAGCTTAAATAACGAGATTATTCAGCTCGCCCTCCAATATCATATTGATGACGTCCAAGTCTCGGCAATCAAT
GGTCTAGAGGGCGTCGATAT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Hydrolase TatD Family; TatD Family Hydrolase; Mg-Dependent DNAse; Metallo Cofactor Biosynthesis Protein; Radical SAM-Superfamily Protein; Deoxyribonuclease TatD Family; TatD Family Deoxyribonuclease; Radical SAM Superfamily Protein; Radical SAM Family Protein; Radical SAM; TatD-Related DeoxyribonucleaseRadical SAM Family Protein; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTDNQPTLVYDIRDSRYLNITGRCTLRCQFCPKHNGSKQVHQYQLDLNRQPKADELIAQLGEVSKFDEYVFCGYGEPTLN
LTSLLDVAKEIKQQGGKVRVNTDGLGNLFHKRNILPELAACVDSLSISLNADTEALYLQHCRPKLAGAYPALLEFIKLAP
QFIDDVQVSAINGLEGVDIDACRALVEARGASFKQRELDIVG

Sequences:

>Translated_202_residues
MTDNQPTLVYDIRDSRYLNITGRCTLRCQFCPKHNGSKQVHQYQLDLNRQPKADELIAQLGEVSKFDEYVFCGYGEPTLN
LTSLLDVAKEIKQQGGKVRVNTDGLGNLFHKRNILPELAACVDSLSISLNADTEALYLQHCRPKLAGAYPALLEFIKLAP
QFIDDVQVSAINGLEGVDIDACRALVEARGASFKQRELDIVG
>Mature_201_residues
TDNQPTLVYDIRDSRYLNITGRCTLRCQFCPKHNGSKQVHQYQLDLNRQPKADELIAQLGEVSKFDEYVFCGYGEPTLNL
TSLLDVAKEIKQQGGKVRVNTDGLGNLFHKRNILPELAACVDSLSISLNADTEALYLQHCRPKLAGAYPALLEFIKLAPQ
FIDDVQVSAINGLEGVDIDACRALVEARGASFKQRELDIVG

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22455; Mature: 22324

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNQPTLVYDIRDSRYLNITGRCTLRCQFCPKHNGSKQVHQYQLDLNRQPKADELIAQL
CCCCCCEEEEEECCCEEEEEECEEEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHH
GEVSKFDEYVFCGYGEPTLNLTSLLDVAKEIKQQGGKVRVNTDGLGNLFHKRNILPELAA
HCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCHHHHHH
CVDSLSISLNADTEALYLQHCRPKLAGAYPALLEFIKLAPQFIDDVQVSAINGLEGVDID
HHHHCEEEECCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
ACRALVEARGASFKQRELDIVG
HHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDNQPTLVYDIRDSRYLNITGRCTLRCQFCPKHNGSKQVHQYQLDLNRQPKADELIAQL
CCCCCEEEEEECCCEEEEEECEEEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHH
GEVSKFDEYVFCGYGEPTLNLTSLLDVAKEIKQQGGKVRVNTDGLGNLFHKRNILPELAA
HCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCHHHHHH
CVDSLSISLNADTEALYLQHCRPKLAGAYPALLEFIKLAPQFIDDVQVSAINGLEGVDID
HHHHCEEEECCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
ACRALVEARGASFKQRELDIVG
HHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA