| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is folK [H]
Identifier: 167622691
GI number: 167622691
Start: 931688
End: 932182
Strand: Reverse
Name: folK [H]
Synonym: Shal_0751
Alternate gene names: 167622691
Gene position: 932182-931688 (Counterclockwise)
Preceding gene: 167622692
Following gene: 167622690
Centisome position: 17.83
GC content: 48.69
Gene sequence:
>495_bases ATGGCTCAAGTCTACGTTGCGTTAGGCGCAAACTTAGCCGATCCGATAAGCCAGCTCAATAGCGCTTGTGAAGCCTTATT GAGCTTGGCAACTGTGGACTCACTTGCCACCTCCCCCTATTATCGTTCAGCCCCCATGGGCGATGTCGAGCAACCTGATT ACGTCAATGCTGTCGTGGGATTTCAAACCATGCTCGCGCCTATCGAGCTACTCGATGCATTACAAGCTATTGAAAACCAG CAAGGCCGCTTAAGAGAGCTACGCTGGGGTCCAAGAACACTCGATTTAGACCTATTACTTTACGACGATCAATCTATCGA TACTCCTCGTTTAGTCGTGCCTCACTATGGCATGCGTGAACGCAGCTTTGTACTGGTGCCTCTGAGTGATATCGCTCCAG AGCTCATCTTGCCAGACAAAACGCCATTATCGAGTCTCGTCAATAAGTCATTGAAAGCAGAGTTAGTATTGGCACAAGCG CCAACTGTGAAATAA
Upstream 100 bases:
>100_bases ATCAGCGTAATGTGATTGCACGCTCAGCCAATAAAGGGGGTCGTAACCGTAACACTAATCAACGTCGACGCCGCAAGCCT AGCACCAAACCTGCAGAATA
Downstream 100 bases:
>100_bases GTGACATTCAGCCAATGTTGTTTTCTGCTAGTATGGCCAGTATCCGTTTAAAAAAACATTCGACACCGAGAACATTGAAG TTGAGCCTTTATTGGCATAT
Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MAQVYVALGANLADPISQLNSACEALLSLATVDSLATSPYYRSAPMGDVEQPDYVNAVVGFQTMLAPIELLDALQAIENQ QGRLRELRWGPRTLDLDLLLYDDQSIDTPRLVVPHYGMRERSFVLVPLSDIAPELILPDKTPLSSLVNKSLKAELVLAQA PTVK
Sequences:
>Translated_164_residues MAQVYVALGANLADPISQLNSACEALLSLATVDSLATSPYYRSAPMGDVEQPDYVNAVVGFQTMLAPIELLDALQAIENQ QGRLRELRWGPRTLDLDLLLYDDQSIDTPRLVVPHYGMRERSFVLVPLSDIAPELILPDKTPLSSLVNKSLKAELVLAQA PTVK >Mature_163_residues AQVYVALGANLADPISQLNSACEALLSLATVDSLATSPYYRSAPMGDVEQPDYVNAVVGFQTMLAPIELLDALQAIENQQ GRLRELRWGPRTLDLDLLLYDDQSIDTPRLVVPHYGMRERSFVLVPLSDIAPELILPDKTPLSSLVNKSLKAELVLAQAP TVK
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=149, Percent_Identity=49.6644295302013, Blast_Score=154, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6324073, Length=143, Percent_Identity=32.8671328671329, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 17944; Mature: 17813
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00794 HPPK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVYVALGANLADPISQLNSACEALLSLATVDSLATSPYYRSAPMGDVEQPDYVNAVVG CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH FQTMLAPIELLDALQAIENQQGRLRELRWGPRTLDLDLLLYDDQSIDTPRLVVPHYGMRE HHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCC RSFVLVPLSDIAPELILPDKTPLSSLVNKSLKAELVLAQAPTVK CCEEEEEHHHCCCCEECCCCCCHHHHHHHHHHHEEEEECCCCCC >Mature Secondary Structure AQVYVALGANLADPISQLNSACEALLSLATVDSLATSPYYRSAPMGDVEQPDYVNAVVG CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH FQTMLAPIELLDALQAIENQQGRLRELRWGPRTLDLDLLLYDDQSIDTPRLVVPHYGMRE HHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCC RSFVLVPLSDIAPELILPDKTPLSSLVNKSLKAELVLAQAPTVK CCEEEEEHHHCCCCEECCCCCCHHHHHHHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10080886 [H]