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The map label for this gene is napD [C]

Identifier: 167622656

GI number: 167622656

Start: 885738

End: 886013

Strand: Reverse

Name: napD [C]

Synonym: Shal_0716

Alternate gene names: 167622656

Gene position: 886013-885738 (Counterclockwise)

Preceding gene: 167622657

Following gene: 167622655

Centisome position: 16.95

GC content: 46.01

Gene sequence:

>276_bases
ATGAGCCAAGAATTTCATATTACCAGCCTAGTCGTGCATGCCGCACCGGGTGCTGTGACTGAAATTAAGAATAAAATATC
AGCTCTTGAAGGCACCGAGATCCATGCCGTTACCGATGAAGGCAAGTTTGTGGTCACCATTGAAGGTGAAACCCAACGCG
CCATCCTCGATAACGTTGAAGCGATAAACGCCCTAGAGGGCGTGTTAAATAGCAGTCTAGTTTATCATCAAGTCGATCCA
GTAGAAGAAAAGAGTGAGGAACACCATGAGCATTAG

Upstream 100 bases:

>100_bases
CCACAGTTTCTGTGAGGTCTAGACTCGAGATAAACCTTTGGTAGAGAACATCGGTATAACCCACCTAGGTGAGTTAGCCA
AATCAATAAAAGGTAGAAAG

Downstream 100 bases:

>100_bases
CCGTCGCGAGTTTCTAAAAGCCAACGCCGCCGTTGCAGCAGCAACAGCTGTAGGCGCGACTCTGCCAGTTAAGATAGTCG
AAGCTGCAGAGCAAAAAGAT

Product: NapD family protein

Products: reduced acceptor; NO3- [C]

Alternate protein names: NapD Protein; Periplasmic Nitrate Reductase Accessory Protein; Periplasmic Nitrate Reductase Chaperone NapD; Periplasmic Nitrate Reductase NapD; NapD Protein Subunit Of Nitrate Reductase; Component Of Of Periplasmic Nitrate Reductase System; Nitrate Reductase Accessory Periplasmic Protein NapD

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MSQEFHITSLVVHAAPGAVTEIKNKISALEGTEIHAVTDEGKFVVTIEGETQRAILDNVEAINALEGVLNSSLVYHQVDP
VEEKSEEHHEH

Sequences:

>Translated_91_residues
MSQEFHITSLVVHAAPGAVTEIKNKISALEGTEIHAVTDEGKFVVTIEGETQRAILDNVEAINALEGVLNSSLVYHQVDP
VEEKSEEHHEH
>Mature_90_residues
SQEFHITSLVVHAAPGAVTEIKNKISALEGTEIHAVTDEGKFVVTIEGETQRAILDNVEAINALEGVLNSSLVYHQVDPV
EEKSEEHHEH

Specific function: Plays A Role In The Correct Assembly Of Subunits Of The Periplasmic Napab Enzyme. [C]

COG id: COG3062

COG function: function code P; Uncharacterized protein involved in formation of periplasmic nitrate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9968; Mature: 9837

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEFHITSLVVHAAPGAVTEIKNKISALEGTEIHAVTDEGKFVVTIEGETQRAILDNVE
CCCCEEHEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHH
AINALEGVLNSSLVYHQVDPVEEKSEEHHEH
HHHHHHHHHCCCEEEEECCCCHHHHHHCCCC
>Mature Secondary Structure 
SQEFHITSLVVHAAPGAVTEIKNKISALEGTEIHAVTDEGKFVVTIEGETQRAILDNVE
CCCEEHEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHH
AINALEGVLNSSLVYHQVDPVEEKSEEHHEH
HHHHHHHHHCCCEEEEECCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA