Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622657

Identifier: 167622657

GI number: 167622657

Start: 886374

End: 887474

Strand: Reverse

Name: 167622657

Synonym: Shal_0717

Alternate gene names: NA

Gene position: 887474-886374 (Counterclockwise)

Preceding gene: 167622658

Following gene: 167622656

Centisome position: 16.98

GC content: 48.77

Gene sequence:

>1101_bases
ATGAAAACGTTTTACCGTTTAGCTCTACTATTTCTGCTTAGCGGCTGCGACTCTGAACCAAACTCGTTATCTACTGGTAT
GGGACAACTGCTCGATGGCAATATTCAGGGTTACACAGCCGTAACTGAGGGCAAGCAGCTATCGTTTCCTCGAGATCACC
AGGCGCATGATGACTTTCGGCAAGAGTGGTGGTACTTAACTGCCAATCTAACCACTGAGACTGGTGAGCATCTGGGTTTA
CAATGGACTCAGTTTCGTATTGCGCTTGCTCCGCCCGCTCCAGATACAGCTAATGGCAATGGCCTGCCATCTAGTTGGCA
AACAAAGCAGCTATATATGTCGCATACTGCGCTCACCAGCAAGCAACAGCATTTAGCCGAGGAAAAGTGGTCTCGGGGCA
ACCCACACTTTGCCGGCACCCAAGTGTCGCCACTTGCGATCCAACAAGACAATTGGCAATGGCGAAGCAGCAATGATGAG
TTGTTTCCAGCCACTTTGTCAGTCGCAACCGACGAGTTCAGTTACCAGCTCAAGCTCGAAAGCCAGTCACCTTTGCAACT
ACAGGGCGATAACGGCTACAGTCGTAAAAATGCCAGCGGCACAGTGGCGAGTTACTACTACAGCCAACCTTTTATCAGGG
TAAGTGGCACCATCGAACGAGATGGGAAAACAATGATGGTAACCGGAGATGGCTGGCTAGATAGAGAGTGGAGCTCACAA
TTTCTTGCTAAGACTCAGCAGGGCTGGGATTGGTTTGCCCTAAGGCTAGATGATGGCTCTGCGCTGATGCTGTTTCAACT
CAGGGATAATAGTGATCCTAAACAACATTTTTATAGTGGTAGACGTATGTACCCCGATGGGCGCGGTAACAACATTAATC
ATCAGCAGATTTCCATGACTGCAACCGCTTGGCAGCAAACACAGTCAGGCCACTATCCTGTAAGTTGGCAGATCGCCATT
CCCTCAGAAGATATTCAACTGACCACTCAAGCCCTCAATGCCAATTCAACCATGCCGCTGTCTATCCCTTATTGGGAGGG
GCCCATCAAAATTAACGGTAGTCACAATGGCTTAGGCTATATGGAACTCACAGGATATTAA

Upstream 100 bases:

>100_bases
TGTTAGTCATCGCCATGATCGTCAGCGCCGTCGCGGTGATCTTGCCGCTGCTGTGGCAGACCCGGCGTCCATTGAACAGT
CGCTTGCAACAGGAGGCGCT

Downstream 100 bases:

>100_bases
TCAATATTTAATAACATATTTACCTAAACCCTGATATATTCCCAATTCGTTTACACAGCCAAAACCAAGTGTAAATGAAA
ATCATTATCAATAATTAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKTFYRLALLFLLSGCDSEPNSLSTGMGQLLDGNIQGYTAVTEGKQLSFPRDHQAHDDFRQEWWYLTANLTTETGEHLGL
QWTQFRIALAPPAPDTANGNGLPSSWQTKQLYMSHTALTSKQQHLAEEKWSRGNPHFAGTQVSPLAIQQDNWQWRSSNDE
LFPATLSVATDEFSYQLKLESQSPLQLQGDNGYSRKNASGTVASYYYSQPFIRVSGTIERDGKTMMVTGDGWLDREWSSQ
FLAKTQQGWDWFALRLDDGSALMLFQLRDNSDPKQHFYSGRRMYPDGRGNNINHQQISMTATAWQQTQSGHYPVSWQIAI
PSEDIQLTTQALNANSTMPLSIPYWEGPIKINGSHNGLGYMELTGY

Sequences:

>Translated_366_residues
MKTFYRLALLFLLSGCDSEPNSLSTGMGQLLDGNIQGYTAVTEGKQLSFPRDHQAHDDFRQEWWYLTANLTTETGEHLGL
QWTQFRIALAPPAPDTANGNGLPSSWQTKQLYMSHTALTSKQQHLAEEKWSRGNPHFAGTQVSPLAIQQDNWQWRSSNDE
LFPATLSVATDEFSYQLKLESQSPLQLQGDNGYSRKNASGTVASYYYSQPFIRVSGTIERDGKTMMVTGDGWLDREWSSQ
FLAKTQQGWDWFALRLDDGSALMLFQLRDNSDPKQHFYSGRRMYPDGRGNNINHQQISMTATAWQQTQSGHYPVSWQIAI
PSEDIQLTTQALNANSTMPLSIPYWEGPIKINGSHNGLGYMELTGY
>Mature_366_residues
MKTFYRLALLFLLSGCDSEPNSLSTGMGQLLDGNIQGYTAVTEGKQLSFPRDHQAHDDFRQEWWYLTANLTTETGEHLGL
QWTQFRIALAPPAPDTANGNGLPSSWQTKQLYMSHTALTSKQQHLAEEKWSRGNPHFAGTQVSPLAIQQDNWQWRSSNDE
LFPATLSVATDEFSYQLKLESQSPLQLQGDNGYSRKNASGTVASYYYSQPFIRVSGTIERDGKTMMVTGDGWLDREWSSQ
FLAKTQQGWDWFALRLDDGSALMLFQLRDNSDPKQHFYSGRRMYPDGRGNNINHQQISMTATAWQQTQSGHYPVSWQIAI
PSEDIQLTTQALNANSTMPLSIPYWEGPIKINGSHNGLGYMELTGY

Specific function: Unknown

COG id: COG5621

COG function: function code R; Predicted secreted hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41355; Mature: 41355

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFYRLALLFLLSGCDSEPNSLSTGMGQLLDGNIQGYTAVTEGKQLSFPRDHQAHDDFR
CCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHC
QEWWYLTANLTTETGEHLGLQWTQFRIALAPPAPDTANGNGLPSSWQTKQLYMSHTALTS
CCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHH
KQQHLAEEKWSRGNPHFAGTQVSPLAIQQDNWQWRSSNDELFPATLSVATDEFSYQLKLE
HHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEECCCCCEEEEEEEEEECCEEEEEEEC
SQSPLQLQGDNGYSRKNASGTVASYYYSQPFIRVSGTIERDGKTMMVTGDGWLDREWSSQ
CCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCEEEEECCCCCCCHHHHH
FLAKTQQGWDWFALRLDDGSALMLFQLRDNSDPKQHFYSGRRMYPDGRGNNINHQQISMT
HHHHHCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHCCCCEECCCCCCCCCCCEEEEEE
ATAWQQTQSGHYPVSWQIAIPSEDIQLTTQALNANSTMPLSIPYWEGPIKINGSHNGLGY
EHHHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEECCCCCCEEECCCCCCEEE
MELTGY
EEEECC
>Mature Secondary Structure
MKTFYRLALLFLLSGCDSEPNSLSTGMGQLLDGNIQGYTAVTEGKQLSFPRDHQAHDDFR
CCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHC
QEWWYLTANLTTETGEHLGLQWTQFRIALAPPAPDTANGNGLPSSWQTKQLYMSHTALTS
CCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHH
KQQHLAEEKWSRGNPHFAGTQVSPLAIQQDNWQWRSSNDELFPATLSVATDEFSYQLKLE
HHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEECCCCCEEEEEEEEEECCEEEEEEEC
SQSPLQLQGDNGYSRKNASGTVASYYYSQPFIRVSGTIERDGKTMMVTGDGWLDREWSSQ
CCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCEEEEECCCCCCCHHHHH
FLAKTQQGWDWFALRLDDGSALMLFQLRDNSDPKQHFYSGRRMYPDGRGNNINHQQISMT
HHHHHCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHCCCCEECCCCCCCCCCCEEEEEE
ATAWQQTQSGHYPVSWQIAIPSEDIQLTTQALNANSTMPLSIPYWEGPIKINGSHNGLGY
EHHHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEECCCCCCEEECCCCCCEEE
MELTGY
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA