Click here to switch to the map view.

The map label for this gene is 167622619

Identifier: 167622619

GI number: 167622619

Start: 837988

End: 838605

Strand: Direct

Name: 167622619

Synonym: Shal_0679

Alternate gene names: NA

Gene position: 837988-838605 (Clockwise)

Preceding gene: 167622618

Following gene: 167622634

Centisome position: 16.03

GC content: 40.29

Gene sequence:

>618_bases
ATGCAAAAAGTGGCTTTAAAACTATCTTCTTTTAAAATGATGTCGGTAAAAAAAATGATTTTTACAGCAATGCTATGGCT
TGCACTGGCGTGTGCTGCACTATTATTTGCCCCTAAAGCTTTGTTGACCTCATTAAGCCTTAATGACTTTTCTCAACAGC
ATGCACACTTTATTGGTTTAGGTTTAATCATTGGTGCTGCCTTTTTATTGACACAGATTTTAAATTATTTCCTAGATGAG
GCGATTAGCCACTTAAGTGATAAGCGTTCCATTGAAATTATTGAGGAAAAAGTAAAGCTGCTCGATCCGACGGAGAGGGC
CCTATTAAGGGAGTTTTTCTTACAAGGTGAAACGATATTAACCTTACCAGAGCAAGAGACTGCCGTTAAAAGTTTATTGA
AGGCAGGTATTTTGGAGCACTTAGGTAACCAGAAGCACTACGCCATCCAAGGATCGACTGCAGATTTTAAGATTTCAATG
CGTGCTCGCGTTCACCTTAATCGTCAAGTTTTGCGTTTTCCAGTAGGAGAGCCAAGCCCTGAAGATATGAAGAACTTGAT
TAAGGCTAGGCCACATTTCGTCAACAGCTTTGTCACTCCGCGAAAGCATGCCGCTTAA

Upstream 100 bases:

>100_bases
TCGCCTTAAACTCGCTAAATTAACACTATATCAGTGTGAATATTGGCACTATTTTTGCTTTTATCTGGGCAGGAACAGAT
TTCTGACACTGGGTACGGGT

Downstream 100 bases:

>100_bases
TATGCAATTAGCCATCACAGCGTAAATACATACGAAATTTAGACAAAAAAATGGGGGCACATAGCCCCCTGCATTAGTAT
TAATATCGAAAATTAATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MQKVALKLSSFKMMSVKKMIFTAMLWLALACAALLFAPKALLTSLSLNDFSQQHAHFIGLGLIIGAAFLLTQILNYFLDE
AISHLSDKRSIEIIEEKVKLLDPTERALLREFFLQGETILTLPEQETAVKSLLKAGILEHLGNQKHYAIQGSTADFKISM
RARVHLNRQVLRFPVGEPSPEDMKNLIKARPHFVNSFVTPRKHAA

Sequences:

>Translated_205_residues
MQKVALKLSSFKMMSVKKMIFTAMLWLALACAALLFAPKALLTSLSLNDFSQQHAHFIGLGLIIGAAFLLTQILNYFLDE
AISHLSDKRSIEIIEEKVKLLDPTERALLREFFLQGETILTLPEQETAVKSLLKAGILEHLGNQKHYAIQGSTADFKISM
RARVHLNRQVLRFPVGEPSPEDMKNLIKARPHFVNSFVTPRKHAA
>Mature_205_residues
MQKVALKLSSFKMMSVKKMIFTAMLWLALACAALLFAPKALLTSLSLNDFSQQHAHFIGLGLIIGAAFLLTQILNYFLDE
AISHLSDKRSIEIIEEKVKLLDPTERALLREFFLQGETILTLPEQETAVKSLLKAGILEHLGNQKHYAIQGSTADFKISM
RARVHLNRQVLRFPVGEPSPEDMKNLIKARPHFVNSFVTPRKHAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23050; Mature: 23050

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVALKLSSFKMMSVKKMIFTAMLWLALACAALLFAPKALLTSLSLNDFSQQHAHFIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
GLIIGAAFLLTQILNYFLDEAISHLSDKRSIEIIEEKVKLLDPTERALLREFFLQGETIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEE
TLPEQETAVKSLLKAGILEHLGNQKHYAIQGSTADFKISMRARVHLNRQVLRFPVGEPSP
ECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCH
EDMKNLIKARPHFVNSFVTPRKHAA
HHHHHHHHHCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQKVALKLSSFKMMSVKKMIFTAMLWLALACAALLFAPKALLTSLSLNDFSQQHAHFIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
GLIIGAAFLLTQILNYFLDEAISHLSDKRSIEIIEEKVKLLDPTERALLREFFLQGETIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEE
TLPEQETAVKSLLKAGILEHLGNQKHYAIQGSTADFKISMRARVHLNRQVLRFPVGEPSP
ECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCH
EDMKNLIKARPHFVNSFVTPRKHAA
HHHHHHHHHCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA