| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622634
Identifier: 167622634
GI number: 167622634
Start: 856318
End: 856584
Strand: Direct
Name: 167622634
Synonym: Shal_0694
Alternate gene names: NA
Gene position: 856318-856584 (Clockwise)
Preceding gene: 167622619
Following gene: 167622635
Centisome position: 16.38
GC content: 48.31
Gene sequence:
>267_bases GTGGTGGTTACTGGGGTAGAGAAACTCGGCTCTATTCCCGCTTTAGGGCTAGGTATTGCAAAGCTTGGCGAGCTGCAGCG TAGAGTGAGACCATTTAATGGCAGTAATGATGCTATCGAAACAGAGGTCTTAGAAAATGAACTTGAGCCGCAGTGGACTC GCTACATTAACAGGCTAGTACAACCCGGTGATGTTGCTGATAACGAGCTTGAACCTGGCTGGAACAAACAGAAAGTCCCT TCAGTGGCAAGCATTCGCAAGTTGTGA
Upstream 100 bases:
>100_bases CATCAGTGAAGCCAAATCATTAAAGGATCAGCTAGAGTCAGTTAATATTAATGAGAAACTAAATGTTTCTGTTGATTTTT ATATTAGTAATAGTAATGGG
Downstream 100 bases:
>100_bases ACGTCAAAATAAAAGGGCTTTAGTTTGGCGATCGCTGCAGAGCCAAAGTGATTATCGAACCAGAGTGAAAAGGAGCGAAT CAATATGAATAATATCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MVVTGVEKLGSIPALGLGIAKLGELQRRVRPFNGSNDAIETEVLENELEPQWTRYINRLVQPGDVADNELEPGWNKQKVP SVASIRKL
Sequences:
>Translated_88_residues MVVTGVEKLGSIPALGLGIAKLGELQRRVRPFNGSNDAIETEVLENELEPQWTRYINRLVQPGDVADNELEPGWNKQKVP SVASIRKL >Mature_88_residues MVVTGVEKLGSIPALGLGIAKLGELQRRVRPFNGSNDAIETEVLENELEPQWTRYINRLVQPGDVADNELEPGWNKQKVP SVASIRKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9750; Mature: 9750
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVTGVEKLGSIPALGLGIAKLGELQRRVRPFNGSNDAIETEVLENELEPQWTRYINRLV CCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHC QPGDVADNELEPGWNKQKVPSVASIRKL CCCCCCCCCCCCCCCCCCCCCHHHHHCC >Mature Secondary Structure MVVTGVEKLGSIPALGLGIAKLGELQRRVRPFNGSNDAIETEVLENELEPQWTRYINRLV CCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHC QPGDVADNELEPGWNKQKVPSVASIRKL CCCCCCCCCCCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA