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The map label for this gene is ybbK [C]

Identifier: 167622478

GI number: 167622478

Start: 647249

End: 648178

Strand: Direct

Name: ybbK [C]

Synonym: Shal_0538

Alternate gene names: 167622478

Gene position: 647249-648178 (Clockwise)

Preceding gene: 167622477

Following gene: 167622479

Centisome position: 12.38

GC content: 46.45

Gene sequence:

>930_bases
ATGTTTGCATTTACACTCTTTGTTTTATTCGTCTTTTTTATTCTCTATAAATTGCTGCTAATTGTACCTATGCGTGAGGT
CAACGTGATTGAGCGCCTAGGTAAGTTTCGTACCGTGTTGCAACCTGGATTTCATTTTTTAATCCCGTTTTTTGACCGCG
TGGCTTATAAGCATGAAATCCGTGAACAAGTGCTCGATGTACCACCACAAAGTTGTATCTCAAAAGACAATACTCAGCTA
GAGGTCGATGGTCTTGTTTATCTGAAGGTGATGGATGGCAAGCTTGCCAGCTATGGTATTGAAGATTATCGCCGCGCGGC
GGTAAACCTAGCACAAACCACCATGCGCTCAGAGATAGGTAAATTAAGCCTAAGCCAGACATTCTCAGAGCGAGATAGTC
TCAACGAGTCGATTGTGCGCGAAATCGATAAAGCATCGGATCCTTGGGGGATCAAGGTACTGCGCTATGAGATTAAAAAT
ATCACCCCATCGCGTAAGGTCATCCACACCCTAGAGAAGCAGATGGAAGCGGAGCGCAGTAAGCGCGCCGAGATCACCTT
GGCAAATGCAGAAAAAGCCGCGATGATTAATCTATCTGAAGGTGAGCGCCAAGAAGCGATTAACTTGTCTGAGGGTGAAA
AACAACGCCGCATCAATGAGGCCAAAGGTACCGCGCAAGAAATTGCAATTGTTGCTCGTGCGAAGGCTGAAGGTATGGAG
TTAGTGTCTGCTGCGCTGGCTAAAGATGGCGGTAACGAAGCGATGAATATGCAGCTAAAAGAGCAGTTCATCACCCAAGT
AGGTAAGATTTTGGCTGAGGCAGATGTGTCTGTTGTACCAGCAGAACTGGCCAAGATTGAGGGATTCTTCGAAGGCATGG
AACAGGTCACTAACGCAGTGTCAGCCAACTCAGTTAAGGGAGCACGCTAA

Upstream 100 bases:

>100_bases
ATCTGCAGAGATAATATTGCGTTAGTGGTTGAGCCTATAAAGGCTGAAGATGAGCACTGCGCAGAAAAGTAATGGGTTTT
AGTCAGGAAAGGATCTCTCT

Downstream 100 bases:

>100_bases
TGATGATTGCAGGAATTGATACCGATCTAATTGTAATGGGCATTTGGGGCCTTATCTTTGCCATCTTTGTGGTTAAGCTA
TTTCAATCGATTCGCTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MFAFTLFVLFVFFILYKLLLIVPMREVNVIERLGKFRTVLQPGFHFLIPFFDRVAYKHEIREQVLDVPPQSCISKDNTQL
EVDGLVYLKVMDGKLASYGIEDYRRAAVNLAQTTMRSEIGKLSLSQTFSERDSLNESIVREIDKASDPWGIKVLRYEIKN
ITPSRKVIHTLEKQMEAERSKRAEITLANAEKAAMINLSEGERQEAINLSEGEKQRRINEAKGTAQEIAIVARAKAEGME
LVSAALAKDGGNEAMNMQLKEQFITQVGKILAEADVSVVPAELAKIEGFFEGMEQVTNAVSANSVKGAR

Sequences:

>Translated_309_residues
MFAFTLFVLFVFFILYKLLLIVPMREVNVIERLGKFRTVLQPGFHFLIPFFDRVAYKHEIREQVLDVPPQSCISKDNTQL
EVDGLVYLKVMDGKLASYGIEDYRRAAVNLAQTTMRSEIGKLSLSQTFSERDSLNESIVREIDKASDPWGIKVLRYEIKN
ITPSRKVIHTLEKQMEAERSKRAEITLANAEKAAMINLSEGERQEAINLSEGEKQRRINEAKGTAQEIAIVARAKAEGME
LVSAALAKDGGNEAMNMQLKEQFITQVGKILAEADVSVVPAELAKIEGFFEGMEQVTNAVSANSVKGAR
>Mature_309_residues
MFAFTLFVLFVFFILYKLLLIVPMREVNVIERLGKFRTVLQPGFHFLIPFFDRVAYKHEIREQVLDVPPQSCISKDNTQL
EVDGLVYLKVMDGKLASYGIEDYRRAAVNLAQTTMRSEIGKLSLSQTFSERDSLNESIVREIDKASDPWGIKVLRYEIKN
ITPSRKVIHTLEKQMEAERSKRAEITLANAEKAAMINLSEGERQEAINLSEGEKQRRINEAKGTAQEIAIVARAKAEGME
LVSAALAKDGGNEAMNMQLKEQFITQVGKILAEADVSVVPAELAKIEGFFEGMEQVTNAVSANSVKGAR

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=290, Percent_Identity=40.6896551724138, Blast_Score=227, Evalue=8e-60,
Organism=Homo sapiens, GI38016911, Length=166, Percent_Identity=36.7469879518072, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI21686995, Length=165, Percent_Identity=32.7272727272727, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI221316744, Length=165, Percent_Identity=32.7272727272727, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI7657615, Length=183, Percent_Identity=28.4153005464481, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI20149563, Length=154, Percent_Identity=30.5194805194805, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI1786697, Length=306, Percent_Identity=33.9869281045752, Blast_Score=184, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI32564147, Length=266, Percent_Identity=42.4812030075188, Blast_Score=227, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI17569499, Length=159, Percent_Identity=35.2201257861635, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71987612, Length=162, Percent_Identity=32.7160493827161, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI25153583, Length=162, Percent_Identity=32.7160493827161, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71987621, Length=162, Percent_Identity=32.7160493827161, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17569493, Length=218, Percent_Identity=29.3577981651376, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI193209764, Length=218, Percent_Identity=29.3577981651376, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17570459, Length=220, Percent_Identity=30.4545454545455, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71989955, Length=165, Percent_Identity=31.5151515151515, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71989948, Length=165, Percent_Identity=31.5151515151515, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI32566490, Length=149, Percent_Identity=32.8859060402685, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI193210507, Length=162, Percent_Identity=30.2469135802469, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17570161, Length=162, Percent_Identity=30.2469135802469, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17569497, Length=189, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45550506, Length=284, Percent_Identity=41.1971830985916, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI45556022, Length=152, Percent_Identity=35.5263157894737, Blast_Score=101, Evalue=7e-22,
Organism=Drosophila melanogaster, GI62484448, Length=162, Percent_Identity=32.7160493827161, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI281365664, Length=162, Percent_Identity=32.7160493827161, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24657857, Length=165, Percent_Identity=32.7272727272727, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI62484274, Length=162, Percent_Identity=32.7160493827161, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI18860517, Length=167, Percent_Identity=31.1377245508982, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI21356845, Length=198, Percent_Identity=29.7979797979798, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281361631, Length=201, Percent_Identity=27.8606965174129, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281361633, Length=201, Percent_Identity=27.8606965174129, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28573263, Length=203, Percent_Identity=30.0492610837438, Blast_Score=84, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34661; Mature: 34661

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAFTLFVLFVFFILYKLLLIVPMREVNVIERLGKFRTVLQPGFHFLIPFFDRVAYKHEI
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
REQVLDVPPQSCISKDNTQLEVDGLVYLKVMDGKLASYGIEDYRRAAVNLAQTTMRSEIG
HHHHHCCCCHHHCCCCCCEEEECCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHH
KLSLSQTFSERDSLNESIVREIDKASDPWGIKVLRYEIKNITPSRKVIHTLEKQMEAERS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KRAEITLANAEKAAMINLSEGERQEAINLSEGEKQRRINEAKGTAQEIAIVARAKAEGME
HCCEEEEECCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVSAALAKDGGNEAMNMQLKEQFITQVGKILAEADVSVVPAELAKIEGFFEGMEQVTNAV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SANSVKGAR
HCCCCCCCC
>Mature Secondary Structure
MFAFTLFVLFVFFILYKLLLIVPMREVNVIERLGKFRTVLQPGFHFLIPFFDRVAYKHEI
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
REQVLDVPPQSCISKDNTQLEVDGLVYLKVMDGKLASYGIEDYRRAAVNLAQTTMRSEIG
HHHHHCCCCHHHCCCCCCEEEECCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHH
KLSLSQTFSERDSLNESIVREIDKASDPWGIKVLRYEIKNITPSRKVIHTLEKQMEAERS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KRAEITLANAEKAAMINLSEGERQEAINLSEGEKQRRINEAKGTAQEIAIVARAKAEGME
HCCEEEEECCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVSAALAKDGGNEAMNMQLKEQFITQVGKILAEADVSVVPAELAKIEGFFEGMEQVTNAV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SANSVKGAR
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]