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The map label for this gene is 167622461

Identifier: 167622461

GI number: 167622461

Start: 627591

End: 629000

Strand: Direct

Name: 167622461

Synonym: Shal_0521

Alternate gene names: NA

Gene position: 627591-629000 (Clockwise)

Preceding gene: 167622460

Following gene: 167622468

Centisome position: 12.01

GC content: 41.77

Gene sequence:

>1410_bases
ATGCATCTAAGACAATGGCAATCAGAGTGCGTCAATCACGCTCTAGAGCACTTTAGTGCCAAACAGAAACACTTCCTTTG
TTTGGCTACTCCAGGCGCTGGTAAGACGATTATGGCTTCAGAAGTCGCTTTTCATTTACTTGAGCAAGACCTTATCGATT
TTGTGCTTTGCTTTTCACCTTCGATAAATATATCGCAGGGTATTAAGCAAACTTTCTCGACACGGCTGGAATGTCGTTTC
GATGGTGTCATAGGTGCCGTTGGTTGCTCTTATACGTATCAAAGCATGCTGTCTTTCAAAGCGGATTTCTGGCAACTGTT
AAAACAAAATCGGGTACTCGTGATATTTGATGAGATCCACCATTGCTCAGGCAGTTCTCTTGAAGATGCCAACGCCTGGG
GGGAAGAGATCCTACTGAATATTCAAAGCCAAGCCGAATACACTTTAGCGTTAACGGGCACTCCGTGGCGCTCAGATCAA
GCACCGATAGCTTTATCTCGTTATACAGACCCAGACAATCAAATACAGTGTGATTATATCTACGGTTTAAGGGAAGCCGT
TGCAGACGGTGTATGCCGAAGCCCAAAGATTGTATTAATCGATAATGAAAGAATTTCGGTAACTGACGAAGAAAATGAAA
CTAAGACGTTTAATTGCCTAGACGCTCTATTCAAAGGTTCATTGGTTTCTTACCAATCGATCATCAAAAATGATGTAGCC
ATTCGGCATGCCTTAACGCTGGCGACTAGCAAGCTCGACGACATTAGACTGCATAACCCTAATGCTGCTGGACTTGTCGT
TGCATCATCGATAGAGCATGCTACATACATTCTGAATATGCTCAGAAATGAATATGGGGAAACTGCCGAAATAGTTACCT
ATAAAGAAGAGCTGCCTTCACTTAAAATCAATGAGTTTAGGAACAGTACAACAAACTGGATTGTCAGTGTTGGCATGATA
AGCGAAGGTACTGACATCCCGCGTTTGCAGGTGTGTTGCCACCTAAGCAGAGTTAAAACCGAACTCTATTTTAGGCAAGT
ACTCGGTAGAATTTTACGGACAAATAAAAGCAAAAACCAAGAAGCTTGGCTATACACTTTTGCAGCACCAAAGCTTGTTG
AGTTTGCAAATCGCATCGCTGAAGAGATTCCAGATGTGCCAATTATATTCAGGGAATCTGAAACGGTTACGGTCTCCGTT
AAGCAGGGGGAAAGCAAAATAGTAAGAACTAGTTTTCTATCTCAAAATGAACATAAAGTTAGGTTTAGTACACCACACAT
AAATCAATCACACTTCCCCATTTTAGCACCACCTAACAATCAAAATCTCACTTGGGTAAACTCGCCATCTTTTGAGATTT
TAGGTGGTTTTAGAGAAAAGGTGGTATCCACTTTCAACTCACCTTTTTGA

Upstream 100 bases:

>100_bases
CTTGAATCCCAGTATTTACAAGCTCGCGAAAACAGCTCAAAACTACTTGGTCAAATCAAAGCGATTAAATCTGTTCTCGC
TCATCAACGAAAGTAACCTA

Downstream 100 bases:

>100_bases
TGCAGAAACCTTATTTATGGTGCCACCATTTTTAATGGCAGCTTGAGTTATATGTTAAGCCTGCCAGAGTTTTACCTTTG
ACACGGAGAAAACTAGCCCG

Product: type III restriction protein res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MHLRQWQSECVNHALEHFSAKQKHFLCLATPGAGKTIMASEVAFHLLEQDLIDFVLCFSPSINISQGIKQTFSTRLECRF
DGVIGAVGCSYTYQSMLSFKADFWQLLKQNRVLVIFDEIHHCSGSSLEDANAWGEEILLNIQSQAEYTLALTGTPWRSDQ
APIALSRYTDPDNQIQCDYIYGLREAVADGVCRSPKIVLIDNERISVTDEENETKTFNCLDALFKGSLVSYQSIIKNDVA
IRHALTLATSKLDDIRLHNPNAAGLVVASSIEHATYILNMLRNEYGETAEIVTYKEELPSLKINEFRNSTTNWIVSVGMI
SEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNKSKNQEAWLYTFAAPKLVEFANRIAEEIPDVPIIFRESETVTVSV
KQGESKIVRTSFLSQNEHKVRFSTPHINQSHFPILAPPNNQNLTWVNSPSFEILGGFREKVVSTFNSPF

Sequences:

>Translated_469_residues
MHLRQWQSECVNHALEHFSAKQKHFLCLATPGAGKTIMASEVAFHLLEQDLIDFVLCFSPSINISQGIKQTFSTRLECRF
DGVIGAVGCSYTYQSMLSFKADFWQLLKQNRVLVIFDEIHHCSGSSLEDANAWGEEILLNIQSQAEYTLALTGTPWRSDQ
APIALSRYTDPDNQIQCDYIYGLREAVADGVCRSPKIVLIDNERISVTDEENETKTFNCLDALFKGSLVSYQSIIKNDVA
IRHALTLATSKLDDIRLHNPNAAGLVVASSIEHATYILNMLRNEYGETAEIVTYKEELPSLKINEFRNSTTNWIVSVGMI
SEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNKSKNQEAWLYTFAAPKLVEFANRIAEEIPDVPIIFRESETVTVSV
KQGESKIVRTSFLSQNEHKVRFSTPHINQSHFPILAPPNNQNLTWVNSPSFEILGGFREKVVSTFNSPF
>Mature_469_residues
MHLRQWQSECVNHALEHFSAKQKHFLCLATPGAGKTIMASEVAFHLLEQDLIDFVLCFSPSINISQGIKQTFSTRLECRF
DGVIGAVGCSYTYQSMLSFKADFWQLLKQNRVLVIFDEIHHCSGSSLEDANAWGEEILLNIQSQAEYTLALTGTPWRSDQ
APIALSRYTDPDNQIQCDYIYGLREAVADGVCRSPKIVLIDNERISVTDEENETKTFNCLDALFKGSLVSYQSIIKNDVA
IRHALTLATSKLDDIRLHNPNAAGLVVASSIEHATYILNMLRNEYGETAEIVTYKEELPSLKINEFRNSTTNWIVSVGMI
SEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNKSKNQEAWLYTFAAPKLVEFANRIAEEIPDVPIIFRESETVTVSV
KQGESKIVRTSFLSQNEHKVRFSTPHINQSHFPILAPPNNQNLTWVNSPSFEILGGFREKVVSTFNSPF

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2917 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 53004; Mature: 53004

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLRQWQSECVNHALEHFSAKQKHFLCLATPGAGKTIMASEVAFHLLEQDLIDFVLCFSP
CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SINISQGIKQTFSTRLECRFDGVIGAVGCSYTYQSMLSFKADFWQLLKQNRVLVIFDEIH
CCCHHHHHHHHHHHHEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
HCSGSSLEDANAWGEEILLNIQSQAEYTLALTGTPWRSDQAPIALSRYTDPDNQIQCDYI
CCCCCCCCHHHHCCHHHEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEHHH
YGLREAVADGVCRSPKIVLIDNERISVTDEENETKTFNCLDALFKGSLVSYQSIIKNDVA
HHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
IRHALTLATSKLDDIRLHNPNAAGLVVASSIEHATYILNMLRNEYGETAEIVTYKEELPS
HHHHHHHHHCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCC
LKINEFRNSTTNWIVSVGMISEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNKSKNQ
CCHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EAWLYTFAAPKLVEFANRIAEEIPDVPIIFRESETVTVSVKQGESKIVRTSFLSQNEHKV
CEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCHHHHHHHHCCCCCEE
RFSTPHINQSHFPILAPPNNQNLTWVNSPSFEILGGFREKVVSTFNSPF
EEECCCCCCCCCEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHLRQWQSECVNHALEHFSAKQKHFLCLATPGAGKTIMASEVAFHLLEQDLIDFVLCFSP
CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SINISQGIKQTFSTRLECRFDGVIGAVGCSYTYQSMLSFKADFWQLLKQNRVLVIFDEIH
CCCHHHHHHHHHHHHEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
HCSGSSLEDANAWGEEILLNIQSQAEYTLALTGTPWRSDQAPIALSRYTDPDNQIQCDYI
CCCCCCCCHHHHCCHHHEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEHHH
YGLREAVADGVCRSPKIVLIDNERISVTDEENETKTFNCLDALFKGSLVSYQSIIKNDVA
HHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
IRHALTLATSKLDDIRLHNPNAAGLVVASSIEHATYILNMLRNEYGETAEIVTYKEELPS
HHHHHHHHHCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCC
LKINEFRNSTTNWIVSVGMISEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNKSKNQ
CCHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EAWLYTFAAPKLVEFANRIAEEIPDVPIIFRESETVTVSVKQGESKIVRTSFLSQNEHKV
CEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCHHHHHHHHCCCCCEE
RFSTPHINQSHFPILAPPNNQNLTWVNSPSFEILGGFREKVVSTFNSPF
EEECCCCCCCCCEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]