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The map label for this gene is 167622468

Identifier: 167622468

GI number: 167622468

Start: 637905

End: 638684

Strand: Direct

Name: 167622468

Synonym: Shal_0528

Alternate gene names: NA

Gene position: 637905-638684 (Clockwise)

Preceding gene: 167622461

Following gene: 167622473

Centisome position: 12.2

GC content: 48.72

Gene sequence:

>780_bases
ATGTATACCGAGCCACAGAAGCGTTTTCGAGCACAAAAAGCGGACAAGATTGAACAAGATCTTATCGCGGTCGCCAACTC
GCAGGCACATATCTCACGGGTGTTTTTAGCCGATGGTGACGCTATGACGCTTCCCTTTGCACGCCTTGAGGCGATCTGCT
TATTGATAAAACAATACTTGCCTAACGTGACGCGAATAAGCAGTTATTGCTTGCCACGTAATATCGATAATAAGACCCCT
GAACAGTTGCAGCGCTTAAGAGAACTTGGACTCACCTTGCTCTATATCGGCTGTGAGAGTGGTGATGATGAGGTGTTAGC
GCGCATTAATAAGGGGGAAACCTTTGATTCCTCATTGGCGGCATTACTGAAGATCAAAGCCGCGGGGATTAAAGCCTCGG
TGATGATTTTAAATGGCTTAGGCGGGGTTGAATTGTCCAAGCTGCATGCCGAAAACTCAGCCAAGTTGATGAATGCGGCG
CAGCCTGAATACCTGTCGACCTTAGTCGTTACCCTGCCGCTGGGTACTGAGCGGATGGACAAGGCTTTTGGCGGCCACTT
TCAGCTGCCGAGTCAGGCGCAGCTGTTTGAAGAGATGCATATTCTACTGAGTAAGCTTGAGCTGAATAAAACGGTATTTC
GTTCGGATCACGCCTCCAATTACTTGGTGCTAAAGGGCGTGCTGGGTAAAGATAAGCAAGCTCTCGTTGCGCAGGTAGAA
GCTGCGATGAATACGCCGAGTAAAATTGAATTACGGCAGGAGTGGCAAAGAGGGCTATAA

Upstream 100 bases:

>100_bases
TATTTTATTTTGACTTTAATTACTGTAAATAATGGGTTTATATACTGGCACTCTTACTGTGGTACGAATATATTACGTCT
TTAGGGGTGATACTTAGCAC

Downstream 100 bases:

>100_bases
GTCTAGCCTGTTGATTTAACCTCCACCTCTTTGCAGTTGTAGTTGGCTGACAATATCTAGGCATTGGTCTTTAAACCATT
GGATCAATGGGTCTTTGTGT

Product: Elongator protein 3/MiaB/NifB

Products: NA

Alternate protein names: Radical SAM Domain Protein; Fe-S Oxidoreductase; Oxygen-Independent Coproporphyrinogen III Oxidase; Radical SAM Family Protein; Radical Sam Domain Protein; Coproporphyrinogen Oxidase; Elongator /MiaB/NifB; Fe-S Oxidoreductase Family Protein; Radical SAM Superfamily Lipoprotein; Oxygen-Independent Coproporphyrinogen III; Radical SAM

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MYTEPQKRFRAQKADKIEQDLIAVANSQAHISRVFLADGDAMTLPFARLEAICLLIKQYLPNVTRISSYCLPRNIDNKTP
EQLQRLRELGLTLLYIGCESGDDEVLARINKGETFDSSLAALLKIKAAGIKASVMILNGLGGVELSKLHAENSAKLMNAA
QPEYLSTLVVTLPLGTERMDKAFGGHFQLPSQAQLFEEMHILLSKLELNKTVFRSDHASNYLVLKGVLGKDKQALVAQVE
AAMNTPSKIELRQEWQRGL

Sequences:

>Translated_259_residues
MYTEPQKRFRAQKADKIEQDLIAVANSQAHISRVFLADGDAMTLPFARLEAICLLIKQYLPNVTRISSYCLPRNIDNKTP
EQLQRLRELGLTLLYIGCESGDDEVLARINKGETFDSSLAALLKIKAAGIKASVMILNGLGGVELSKLHAENSAKLMNAA
QPEYLSTLVVTLPLGTERMDKAFGGHFQLPSQAQLFEEMHILLSKLELNKTVFRSDHASNYLVLKGVLGKDKQALVAQVE
AAMNTPSKIELRQEWQRGL
>Mature_259_residues
MYTEPQKRFRAQKADKIEQDLIAVANSQAHISRVFLADGDAMTLPFARLEAICLLIKQYLPNVTRISSYCLPRNIDNKTP
EQLQRLRELGLTLLYIGCESGDDEVLARINKGETFDSSLAALLKIKAAGIKASVMILNGLGGVELSKLHAENSAKLMNAA
QPEYLSTLVVTLPLGTERMDKAFGGHFQLPSQAQLFEEMHILLSKLELNKTVFRSDHASNYLVLKGVLGKDKQALVAQVE
AAMNTPSKIELRQEWQRGL

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28749; Mature: 28749

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTEPQKRFRAQKADKIEQDLIAVANSQAHISRVFLADGDAMTLPFARLEAICLLIKQYL
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCEEECCHHHHHHHHHHHHHHC
PNVTRISSYCLPRNIDNKTPEQLQRLRELGLTLLYIGCESGDDEVLARINKGETFDSSLA
CCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCHHHHHH
ALLKIKAAGIKASVMILNGLGGVELSKLHAENSAKLMNAAQPEYLSTLVVTLPLGTERMD
HHHHHHHCCCEEEEEEEECCCCCCHHHHHCCCHHHHHHCCCHHHHHHHHEEECCCHHHHH
KAFGGHFQLPSQAQLFEEMHILLSKLELNKTVFRSDHASNYLVLKGVLGKDKQALVAQVE
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH
AAMNTPSKIELRQEWQRGL
HHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MYTEPQKRFRAQKADKIEQDLIAVANSQAHISRVFLADGDAMTLPFARLEAICLLIKQYL
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCEEECCHHHHHHHHHHHHHHC
PNVTRISSYCLPRNIDNKTPEQLQRLRELGLTLLYIGCESGDDEVLARINKGETFDSSLA
CCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCHHHHHH
ALLKIKAAGIKASVMILNGLGGVELSKLHAENSAKLMNAAQPEYLSTLVVTLPLGTERMD
HHHHHHHCCCEEEEEEEECCCCCCHHHHHCCCHHHHHHCCCHHHHHHHHEEECCCHHHHH
KAFGGHFQLPSQAQLFEEMHILLSKLELNKTVFRSDHASNYLVLKGVLGKDKQALVAQVE
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH
AAMNTPSKIELRQEWQRGL
HHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA