Click here to switch to the map view.

The map label for this gene is 167622460

Identifier: 167622460

GI number: 167622460

Start: 627047

End: 627586

Strand: Direct

Name: 167622460

Synonym: Shal_0520

Alternate gene names: NA

Gene position: 627047-627586 (Clockwise)

Preceding gene: 167622457

Following gene: 167622461

Centisome position: 12.0

GC content: 40.19

Gene sequence:

>540_bases
ATGTCAAAACCATCCATCAAAATTAATGCCCAACTAAATGCAATTCTCCAGGATGAGAACTTTGACGACTTCAATGTGAC
GCAATTGCGTGATGCATACCTAGCAATGTCTTCAACGGTTGAAGAGCCCATTGAGGCTCGCAAATATGTCTATAGGCAAA
TTCTTAGGCTGCTTAAGAAAGGCTTACTGCTAAAGAAAGGAACCAAAAGCTCAAAAAGAGTTGTGTACCAAAAGGCAGAT
CTATTCTTTAAAACTAACTTCGTCGTCCAAAGTACAACTGAGGATAAAGTGAATCGACCCAAAGCAGTTACTGTCGGCAT
AAACACTACAGTCGAACAGCTTGAAAAGCGCCTTAAAGAATCTGAAGTTGATTTACTCACTAGCATTGGCGAGTCAGAAG
AATATATGCGGTTGTATCAATCCTTTCCAGAGATGAAAGCGCACCTTGAATCCCAGTATTTACAAGCTCGCGAAAACAGC
TCAAAACTACTTGGTCAAATCAAAGCGATTAAATCTGTTCTCGCTCATCAACGAAAGTAA

Upstream 100 bases:

>100_bases
AGTTGCGGCTTATAAAGCCACGGATTATAATCCGTATTAATAATGTGAAGTTATCCTAGCCATGTGAGTTAGAGATAAAG
AGCCTCTTTGCGAGAAAGTA

Downstream 100 bases:

>100_bases
CCTAATGCATCTAAGACAATGGCAATCAGAGTGCGTCAATCACGCTCTAGAGCACTTTAGTGCCAAACAGAAACACTTCC
TTTGTTTGGCTACTCCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSKPSIKINAQLNAILQDENFDDFNVTQLRDAYLAMSSTVEEPIEARKYVYRQILRLLKKGLLLKKGTKSSKRVVYQKAD
LFFKTNFVVQSTTEDKVNRPKAVTVGINTTVEQLEKRLKESEVDLLTSIGESEEYMRLYQSFPEMKAHLESQYLQARENS
SKLLGQIKAIKSVLAHQRK

Sequences:

>Translated_179_residues
MSKPSIKINAQLNAILQDENFDDFNVTQLRDAYLAMSSTVEEPIEARKYVYRQILRLLKKGLLLKKGTKSSKRVVYQKAD
LFFKTNFVVQSTTEDKVNRPKAVTVGINTTVEQLEKRLKESEVDLLTSIGESEEYMRLYQSFPEMKAHLESQYLQARENS
SKLLGQIKAIKSVLAHQRK
>Mature_178_residues
SKPSIKINAQLNAILQDENFDDFNVTQLRDAYLAMSSTVEEPIEARKYVYRQILRLLKKGLLLKKGTKSSKRVVYQKADL
FFKTNFVVQSTTEDKVNRPKAVTVGINTTVEQLEKRLKESEVDLLTSIGESEEYMRLYQSFPEMKAHLESQYLQARENSS
KLLGQIKAIKSVLAHQRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20617; Mature: 20486

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPSIKINAQLNAILQDENFDDFNVTQLRDAYLAMSSTVEEPIEARKYVYRQILRLLKK
CCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLLKKGTKSSKRVVYQKADLFFKTNFVVQSTTEDKVNRPKAVTVGINTTVEQLEKRLKE
CCHHCCCCCCHHHHHHHHHHHEEEECEEEECCCHHHCCCCCEEEEECCHHHHHHHHHHHH
SEVDLLTSIGESEEYMRLYQSFPEMKAHLESQYLQARENSSKLLGQIKAIKSVLAHQRK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKPSIKINAQLNAILQDENFDDFNVTQLRDAYLAMSSTVEEPIEARKYVYRQILRLLKK
CCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLLKKGTKSSKRVVYQKADLFFKTNFVVQSTTEDKVNRPKAVTVGINTTVEQLEKRLKE
CCHHCCCCCCHHHHHHHHHHHEEEECEEEECCCHHHCCCCCEEEEECCHHHHHHHHHHHH
SEVDLLTSIGESEEYMRLYQSFPEMKAHLESQYLQARENSSKLLGQIKAIKSVLAHQRK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA