| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622314
Identifier: 167622314
GI number: 167622314
Start: 440372
End: 440818
Strand: Reverse
Name: 167622314
Synonym: Shal_0374
Alternate gene names: NA
Gene position: 440818-440372 (Counterclockwise)
Preceding gene: 167622315
Following gene: 167622313
Centisome position: 8.43
GC content: 50.11
Gene sequence:
>447_bases ATGAAGGGCATTCTACATACTGAACTGGAAGTAGAAATTCCATTCCATGACGTCGATTCTATGGGGATCACCTGGCATGG CAACTACCTACGCTACTTTGAGCTGGTGCGCTGTAAGCTGCTGGATAAAATTGGCTACGGTTACCGCGCCATGCAGGACT CAGGGTTTAGCTGGCCGATTGTCGACGTGCAGATAAAATACGTGCAGTCGAGCACCTTCGAGCAGACTATTATCGTCAAG GCGACTCTGGTCGAATGGGAAAACCGCCTCAAGATAAACTATCAGGTGGTCGATGCCCAAACCGGTAAACGTATCACTAA GGGTCACACCATTCAGGCGGCGGTCGATATGCAAACCCAAGAGCTTTGCTTTGTGACGCCTGCGGTTTTCCAGCAGAAGA TAGCCCATCTACTGCCTCAGCTATCCAGTAGTGAGCAAAGCGAATGA
Upstream 100 bases:
>100_bases TAGAGATCCCATTCCATGACGTCGATTCTATGGGCTATGACAGATGGCATGGTAACTCTTTACCTGTTACTCATCTGAAT ATCACACGGAGAGTCAGCTA
Downstream 100 bases:
>100_bases AACGCCTCTTTCCCCTAACACAGGCTCGAGCACTCGCCCTAACACAAGCCCTACTGCTGTCGGTACTGATCAGCAGTTAC GCACAGGCTGACACAAACGC
Product: 4-hydroxybenzoyl-CoA thioesterase
Products: NA
Alternate protein names: Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase Domain Protein; Thioesterase Family Protein; 4-Hydroxybenzoyl-CoA Thioesterase Domain-Containing Protein; Esterase; Thioesterase Superfamily; 4-Hydroxybenzoyl-CoA Thioesterase Family Protein; Conserved Thioesterase; Thioesterase Domain-Containing Protein; Thioesterase Protein; GTP Cyclohydrolase I; Acyl-CoA Thioester Hydrolase YbgC/YbaW Family; Protein With Thioesterase Domain-Containing Protein
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKGILHTELEVEIPFHDVDSMGITWHGNYLRYFELVRCKLLDKIGYGYRAMQDSGFSWPIVDVQIKYVQSSTFEQTIIVK ATLVEWENRLKINYQVVDAQTGKRITKGHTIQAAVDMQTQELCFVTPAVFQQKIAHLLPQLSSSEQSE
Sequences:
>Translated_148_residues MKGILHTELEVEIPFHDVDSMGITWHGNYLRYFELVRCKLLDKIGYGYRAMQDSGFSWPIVDVQIKYVQSSTFEQTIIVK ATLVEWENRLKINYQVVDAQTGKRITKGHTIQAAVDMQTQELCFVTPAVFQQKIAHLLPQLSSSEQSE >Mature_148_residues MKGILHTELEVEIPFHDVDSMGITWHGNYLRYFELVRCKLLDKIGYGYRAMQDSGFSWPIVDVQIKYVQSSTFEQTIIVK ATLVEWENRLKINYQVVDAQTGKRITKGHTIQAAVDMQTQELCFVTPAVFQQKIAHLLPQLSSSEQSE
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17037; Mature: 17037
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGILHTELEVEIPFHDVDSMGITWHGNYLRYFELVRCKLLDKIGYGYRAMQDSGFSWPI CCCCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCE VDVQIKYVQSSTFEQTIIVKATLVEWENRLKINYQVVDAQTGKRITKGHTIQAAVDMQTQ EEEEEEEEECCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCEECCCCEEEEEECCCCC ELCFVTPAVFQQKIAHLLPQLSSSEQSE CEEEECHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKGILHTELEVEIPFHDVDSMGITWHGNYLRYFELVRCKLLDKIGYGYRAMQDSGFSWPI CCCCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCE VDVQIKYVQSSTFEQTIIVKATLVEWENRLKINYQVVDAQTGKRITKGHTIQAAVDMQTQ EEEEEEEEECCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCEECCCCEEEEEECCCCC ELCFVTPAVFQQKIAHLLPQLSSSEQSE CEEEECHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA