Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622313

Identifier: 167622313

GI number: 167622313

Start: 439608

End: 440375

Strand: Reverse

Name: 167622313

Synonym: Shal_0373

Alternate gene names: NA

Gene position: 440375-439608 (Counterclockwise)

Preceding gene: 167622314

Following gene: 167622312

Centisome position: 8.43

GC content: 50.65

Gene sequence:

>768_bases
ATGAAACGCCTCTTTCCCCTAACACAGGCTCGAGCACTCGCCCTAACACAAGCCCTACTGCTGTCGGTACTGATCAGCAG
TTACGCACAGGCTGACACAAACGCCGATTACTCGGAGCTATTTCAGCATGAGGCGAGCAGTGCAGAGCTAACAAAGCTAA
CGACTCAGCTATCGCCAAGTGCGCAGGCTAAAGGGGATTTCAGCCAATATCGCTACCTCAAGGTGCTTAAAAAGCCGTTA
GTCAGCCAAGGTGAGTTTATCTTTGCAAAAGATCTCGGCGTAATTTGGCAGCAGAATATGCCTTTTTCCAGCACGCTGAT
CTTAAAGGATAAGCAGCTTATCCAGATAGATAGCCAAGGCAATATCAACATCAATAACGCCGAGCAAGCTGGCAGTGGCA
ATCAGATCAGTGACGTGATGCCAAAGCTGTTAAACGCCCTGTTAAGCGGTGATATTCAGCAGCTAGAGCAGCACTTTTCA
CTCAGTCTGCTGCTAGAGCCTAATACCGAAGGCCAAGCGCCTCAGCAGTGGCAACTGGGGCTAAAACCCACAGACCCATT
GCTAGAGAAAGCGATGCCGCAGATGGTACTGGCTGGCAATGAGCAGATCCAAACTCTGGTGCTGTTTAGCCGTAACGGCG
ATCGCAGCCGCATCGAATTTTCGGCCATCGATGAAAGCCCATTAACGGCAGCGGACAAGCAGCGCTTTAGCCCCGCTTCG
TTATCAGATCCATCGGTTAATAACGCCCCCAATATCGAGGGCAAATAG

Upstream 100 bases:

>100_bases
TCGATATGCAAACCCAAGAGCTTTGCTTTGTGACGCCTGCGGTTTTCCAGCAGAAGATAGCCCATCTACTGCCTCAGCTA
TCCAGTAGTGAGCAAAGCGA

Downstream 100 bases:

>100_bases
CCATAATGAAGCCGAGCTTGAATCAATTTCTAAGCCATAAGACCGCCAAGTTAAGACTACTCATTTGGCTAACCCTAATC
GCTATTACCTTAGCGACAGG

Product: outer membrane lipoprotein carrier protein LolA

Products: NA

Alternate protein names: Signal Peptide Protein; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Protein; Outer Membrane Lipoprotein Carrier Protein; Exported Lipoprotein

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKRLFPLTQARALALTQALLLSVLISSYAQADTNADYSELFQHEASSAELTKLTTQLSPSAQAKGDFSQYRYLKVLKKPL
VSQGEFIFAKDLGVIWQQNMPFSSTLILKDKQLIQIDSQGNININNAEQAGSGNQISDVMPKLLNALLSGDIQQLEQHFS
LSLLLEPNTEGQAPQQWQLGLKPTDPLLEKAMPQMVLAGNEQIQTLVLFSRNGDRSRIEFSAIDESPLTAADKQRFSPAS
LSDPSVNNAPNIEGK

Sequences:

>Translated_255_residues
MKRLFPLTQARALALTQALLLSVLISSYAQADTNADYSELFQHEASSAELTKLTTQLSPSAQAKGDFSQYRYLKVLKKPL
VSQGEFIFAKDLGVIWQQNMPFSSTLILKDKQLIQIDSQGNININNAEQAGSGNQISDVMPKLLNALLSGDIQQLEQHFS
LSLLLEPNTEGQAPQQWQLGLKPTDPLLEKAMPQMVLAGNEQIQTLVLFSRNGDRSRIEFSAIDESPLTAADKQRFSPAS
LSDPSVNNAPNIEGK
>Mature_255_residues
MKRLFPLTQARALALTQALLLSVLISSYAQADTNADYSELFQHEASSAELTKLTTQLSPSAQAKGDFSQYRYLKVLKKPL
VSQGEFIFAKDLGVIWQQNMPFSSTLILKDKQLIQIDSQGNININNAEQAGSGNQISDVMPKLLNALLSGDIQQLEQHFS
LSLLLEPNTEGQAPQQWQLGLKPTDPLLEKAMPQMVLAGNEQIQTLVLFSRNGDRSRIEFSAIDESPLTAADKQRFSPAS
LSDPSVNNAPNIEGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28056; Mature: 28056

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFPLTQARALALTQALLLSVLISSYAQADTNADYSELFQHEASSAELTKLTTQLSPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCC
AQAKGDFSQYRYLKVLKKPLVSQGEFIFAKDLGVIWQQNMPFSSTLILKDKQLIQIDSQG
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHEECCCCCCEEEEEECCEEEEECCCC
NININNAEQAGSGNQISDVMPKLLNALLSGDIQQLEQHFSLSLLLEPNTEGQAPQQWQLG
CEEECCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCCHHEECC
LKPTDPLLEKAMPQMVLAGNEQIQTLVLFSRNGDRSRIEFSAIDESPLTAADKQRFSPAS
CCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHCCCCCC
LSDPSVNNAPNIEGK
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRLFPLTQARALALTQALLLSVLISSYAQADTNADYSELFQHEASSAELTKLTTQLSPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCC
AQAKGDFSQYRYLKVLKKPLVSQGEFIFAKDLGVIWQQNMPFSSTLILKDKQLIQIDSQG
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHEECCCCCCEEEEEECCEEEEECCCC
NININNAEQAGSGNQISDVMPKLLNALLSGDIQQLEQHFSLSLLLEPNTEGQAPQQWQLG
CEEECCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCCHHEECC
LKPTDPLLEKAMPQMVLAGNEQIQTLVLFSRNGDRSRIEFSAIDESPLTAADKQRFSPAS
CCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHCCCCCC
LSDPSVNNAPNIEGK
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA