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The map label for this gene is yccM [H]

Identifier: 167622298

GI number: 167622298

Start: 423905

End: 425119

Strand: Reverse

Name: yccM [H]

Synonym: Shal_0357

Alternate gene names: 167622298

Gene position: 425119-423905 (Counterclockwise)

Preceding gene: 167622299

Following gene: 167622294

Centisome position: 8.13

GC content: 48.15

Gene sequence:

>1215_bases
ATGAGCTTTATCGAATCCTTAACCCTTGCCCTAGCACTAACCTACAGCGTTAGTCTTATCTATTGGAGTGGCAAGAAATG
GGGGGCACTGATTACAGGCCTATTAATTACAGGAGCCATTATCTCCAGTCTTTATTGGCCGTTAATCGCCGCACTAGCCA
TTGCAGTCGTTATCATAGGCTTAGTCTACAAATTCCAACCAAAGGTCGCTCAAGGCGATATGAGGGCCAATAACCTACGA
GATGGTGTTCAGCATCTTCTGGCACTTTCAATGCTATTGGTTGGCGTACAATTTGCTGTTAATGCTGCGTTATTAAAATC
AGGGATCACTCCGTGGTTAATGCGCCCCGATGTGGGCGATGCCTTCTTGCCGATTGCTGGCGGCATCGAGATCAAGGCGA
TTTTAAGTTTAGGGATCTGGGATCAAAACCACCCTGCTGCAGCGGTCATGCTAACCGTGGTATTACTAACAGGCCTGCTG
TGTAAGCGCGCCTTCTGCGGCTGGGCCTGCCCACTGGGCTTGGCAGGAGAATATCTCTATAAACTCAGAAAACGTTTTAT
TAAGCAGGAGCTATTGCCACCGGCTTGGATAGACTGGCCACTGCGGATGATAAAATACCTGCTATTACTGGCCTTGCTGT
ACATCATCGTCGGCATGCCAACCATGAGTATTCCCGGCTACCTGAACAGTAATTACCACAAGATTGCCGATCTCAAGATG
GCACTGTTTTTTATCACTCCAGGGCTCGTGACCTTAATCTGTTTCGGCTTTATTCTTGGGCTTGCAGCTTGGCGTCGCCA
AGGGTTTTGTCGCTACATCTGCCCTTATGGTGCGCTTTTAGGGCTACTGAGCTTTCTTAGTCCATTCAAGATCCGTCGTA
ATACCAAGCACTGCTTGATTGAGACTAAAGGCATGAGTTGCGACAAGTGCAGCCGTGCCTGCCCAGCTAATATCAAGGTG
CATAACCAAATCAACATTCGCTCAGATGAGTGCCAAGCCTGTATGCGTTGTATATCGGCTTGTCCTAAGAAAGAAGCGCT
ACAGTTTAGTACTCGCAACGGTTGGAAGCTTTCAGCACGAGGCTTAACGGTTATGCTACTAACCATCATGTTCCTGCTAC
CGCTTATCGCTTATCTAGCAGGCTTCTGGCACAGCGAAACGCCCGTTGAGGCGCGGATGTATTTGATTCAACATCTAGAT
AGGATTGGGCATTGA

Upstream 100 bases:

>100_bases
CTTAATTTTTAGATCTCGTCCACAAGCTAACAACCCCTTCAGAACCAATTCTCAAAAAAAGTTTCACACTAGTATCAATA
ACAATTGAACAGATACTCAT

Downstream 100 bases:

>100_bases
TAGAAGGTCCTAGGTCCTAGGAAAAGCAGGCTCTAGGAAAGGCTAAGACAGTACAAGACGAACGGCCTGCGGCCTTACGG
AACGCTGCGCTTACGGAAAA

Product: 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSFIESLTLALALTYSVSLIYWSGKKWGALITGLLITGAIISSLYWPLIAALAIAVVIIGLVYKFQPKVAQGDMRANNLR
DGVQHLLALSMLLVGVQFAVNAALLKSGITPWLMRPDVGDAFLPIAGGIEIKAILSLGIWDQNHPAAAVMLTVVLLTGLL
CKRAFCGWACPLGLAGEYLYKLRKRFIKQELLPPAWIDWPLRMIKYLLLLALLYIIVGMPTMSIPGYLNSNYHKIADLKM
ALFFITPGLVTLICFGFILGLAAWRRQGFCRYICPYGALLGLLSFLSPFKIRRNTKHCLIETKGMSCDKCSRACPANIKV
HNQINIRSDECQACMRCISACPKKEALQFSTRNGWKLSARGLTVMLLTIMFLLPLIAYLAGFWHSETPVEARMYLIQHLD
RIGH

Sequences:

>Translated_404_residues
MSFIESLTLALALTYSVSLIYWSGKKWGALITGLLITGAIISSLYWPLIAALAIAVVIIGLVYKFQPKVAQGDMRANNLR
DGVQHLLALSMLLVGVQFAVNAALLKSGITPWLMRPDVGDAFLPIAGGIEIKAILSLGIWDQNHPAAAVMLTVVLLTGLL
CKRAFCGWACPLGLAGEYLYKLRKRFIKQELLPPAWIDWPLRMIKYLLLLALLYIIVGMPTMSIPGYLNSNYHKIADLKM
ALFFITPGLVTLICFGFILGLAAWRRQGFCRYICPYGALLGLLSFLSPFKIRRNTKHCLIETKGMSCDKCSRACPANIKV
HNQINIRSDECQACMRCISACPKKEALQFSTRNGWKLSARGLTVMLLTIMFLLPLIAYLAGFWHSETPVEARMYLIQHLD
RIGH
>Mature_403_residues
SFIESLTLALALTYSVSLIYWSGKKWGALITGLLITGAIISSLYWPLIAALAIAVVIIGLVYKFQPKVAQGDMRANNLRD
GVQHLLALSMLLVGVQFAVNAALLKSGITPWLMRPDVGDAFLPIAGGIEIKAILSLGIWDQNHPAAAVMLTVVLLTGLLC
KRAFCGWACPLGLAGEYLYKLRKRFIKQELLPPAWIDWPLRMIKYLLLLALLYIIVGMPTMSIPGYLNSNYHKIADLKMA
LFFITPGLVTLICFGFILGLAAWRRQGFCRYICPYGALLGLLSFLSPFKIRRNTKHCLIETKGMSCDKCSRACPANIKVH
NQINIRSDECQACMRCISACPKKEALQFSTRNGWKLSARGLTVMLLTIMFLLPLIAYLAGFWHSETPVEARMYLIQHLDR
IGH

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=355, Percent_Identity=34.3661971830986, Blast_Score=209, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44936; Mature: 44805

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFIESLTLALALTYSVSLIYWSGKKWGALITGLLITGAIISSLYWPLIAALAIAVVIIG
CCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVYKFQPKVAQGDMRANNLRDGVQHLLALSMLLVGVQFAVNAALLKSGITPWLMRPDVGD
HHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC
AFLPIAGGIEIKAILSLGIWDQNHPAAAVMLTVVLLTGLLCKRAFCGWACPLGLAGEYLY
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KLRKRFIKQELLPPAWIDWPLRMIKYLLLLALLYIIVGMPTMSIPGYLNSNYHKIADLKM
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
ALFFITPGLVTLICFGFILGLAAWRRQGFCRYICPYGALLGLLSFLSPFKIRRNTKHCLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEE
ETKGMSCDKCSRACPANIKVHNQINIRSDECQACMRCISACPKKEALQFSTRNGWKLSAR
EECCCCHHHHHCCCCCCCEEECEECCCHHHHHHHHHHHHHCCCHHHHEECCCCCCEEECC
GLTVMLLTIMFLLPLIAYLAGFWHSETPVEARMYLIQHLDRIGH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFIESLTLALALTYSVSLIYWSGKKWGALITGLLITGAIISSLYWPLIAALAIAVVIIG
CHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVYKFQPKVAQGDMRANNLRDGVQHLLALSMLLVGVQFAVNAALLKSGITPWLMRPDVGD
HHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC
AFLPIAGGIEIKAILSLGIWDQNHPAAAVMLTVVLLTGLLCKRAFCGWACPLGLAGEYLY
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KLRKRFIKQELLPPAWIDWPLRMIKYLLLLALLYIIVGMPTMSIPGYLNSNYHKIADLKM
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
ALFFITPGLVTLICFGFILGLAAWRRQGFCRYICPYGALLGLLSFLSPFKIRRNTKHCLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEE
ETKGMSCDKCSRACPANIKVHNQINIRSDECQACMRCISACPKKEALQFSTRNGWKLSAR
EECCCCHHHHHCCCCCCCEEECEECCCHHHHHHHHHHHHHCCCHHHHEECCCCCCEEECC
GLTVMLLTIMFLLPLIAYLAGFWHSETPVEARMYLIQHLDRIGH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]