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The map label for this gene is hemG [H]

Identifier: 167621963

GI number: 167621963

Start: 26185

End: 26724

Strand: Direct

Name: hemG [H]

Synonym: Shal_0022

Alternate gene names: 167621963

Gene position: 26185-26724 (Clockwise)

Preceding gene: 167621961

Following gene: 167621969

Centisome position: 0.5

GC content: 44.26

Gene sequence:

>540_bases
ATGAAATCAGTTCTGGTACTTTATTATTCTCGTGGCGGCCATACAGCTAGAATCAGCCGCGCTATCTCCGACCACTTAGC
TAGTCAAGGTCACCAGTGCGACATGATGCATATTAGTGAGGCGAAGGCCGAAGGTGTCGATTGGGCTAAGTATGATGTTG
TTGCTCTCGGTGCTTGTGTACTTTACGGCAGCTATCATAAGTCTGTATTTGAATTCGCAGCAGCGCATCAAGCTGAATTA
AGCGCGAAAGCCTCAAGCTTCTTCAGTGTCAATGTGGTTGCGCGTAACCCAGAAAAATGTGTGCCAGAAAACAATAAGTA
TCTACAGAAGTTCATTGAGCTATCAGCGTGGAAACCTAACGACGTGAAGGTGATTGCTGGTAAGGTTGATTACCCTGCTT
GGCGTTGGTATGACAGAATGATGATCCAATTGATCATGAAAATCACCAATGGCCCAACTGATCCAAAAGCTGTGATTGAT
TATACCGATTGGGATGATGTTAAGGTCTATGCAGACCATTTGGTTAGTTTAGCGAAATAA

Upstream 100 bases:

>100_bases
CGATAATATGAGCTACACCTAATTTGTGATCCATTATCCTTTAAAAACTGCGATTTGCTGTAACAATGGATTTAATAACA
AATTTTCAATTGGAATACAG

Downstream 100 bases:

>100_bases
ACTCATTAATAAAAAAGCCGCATTTTATGCGGCTTTTTTATATTTTAAAATTGACGATTTAGTACTTCCAGAAGCTTGGA
TGAAATAATACGGCAACAGT

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKSVLVLYYSRGGHTARISRAISDHLASQGHQCDMMHISEAKAEGVDWAKYDVVALGACVLYGSYHKSVFEFAAAHQAEL
SAKASSFFSVNVVARNPEKCVPENNKYLQKFIELSAWKPNDVKVIAGKVDYPAWRWYDRMMIQLIMKITNGPTDPKAVID
YTDWDDVKVYADHLVSLAK

Sequences:

>Translated_179_residues
MKSVLVLYYSRGGHTARISRAISDHLASQGHQCDMMHISEAKAEGVDWAKYDVVALGACVLYGSYHKSVFEFAAAHQAEL
SAKASSFFSVNVVARNPEKCVPENNKYLQKFIELSAWKPNDVKVIAGKVDYPAWRWYDRMMIQLIMKITNGPTDPKAVID
YTDWDDVKVYADHLVSLAK
>Mature_179_residues
MKSVLVLYYSRGGHTARISRAISDHLASQGHQCDMMHISEAKAEGVDWAKYDVVALGACVLYGSYHKSVFEFAAAHQAEL
SAKASSFFSVNVVARNPEKCVPENNKYLQKFIELSAWKPNDVKVIAGKVDYPAWRWYDRMMIQLIMKITNGPTDPKAVID
YTDWDDVKVYADHLVSLAK

Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor [H]

COG id: COG4635

COG function: function code CH; Flavodoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790285, Length=175, Percent_Identity=40.5714285714286, Blast_Score=153, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: =1.3.5.3 [H]

Molecular weight: Translated: 20161; Mature: 20161

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVLVLYYSRGGHTARISRAISDHLASQGHQCDMMHISEAKAEGVDWAKYDVVALGACV
CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCHHHHHHHHHHHH
LYGSYHKSVFEFAAAHQAELSAKASSFFSVNVVARNPEKCVPENNKYLQKFIELSAWKPN
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHCCCCCHHHHHHHHHHCCCCCC
DVKVIAGKVDYPAWRWYDRMMIQLIMKITNGPTDPKAVIDYTDWDDVKVYADHLVSLAK
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKSVLVLYYSRGGHTARISRAISDHLASQGHQCDMMHISEAKAEGVDWAKYDVVALGACV
CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCHHHHHHHHHHHH
LYGSYHKSVFEFAAAHQAELSAKASSFFSVNVVARNPEKCVPENNKYLQKFIELSAWKPN
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHCCCCCHHHHHHHHHHCCCCCC
DVKVIAGKVDYPAWRWYDRMMIQLIMKITNGPTDPKAVIDYTDWDDVKVYADHLVSLAK
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]