Click here to switch to the map view.

The map label for this gene is hemG [H]

Identifier: 167621961

GI number: 167621961

Start: 25075

End: 25602

Strand: Direct

Name: hemG [H]

Synonym: Shal_0020

Alternate gene names: 167621961

Gene position: 25075-25602 (Clockwise)

Preceding gene: 167621960

Following gene: 167621963

Centisome position: 0.48

GC content: 44.13

Gene sequence:

>528_bases
ATGAACAACACACTAATTATTTACTCGACAGTTGATGGCCAAACTAAAGCGATTTGTGAGCAGATCAAGAAGATTAACCA
AGCGCAGAATGCCAAGGTTACGTTAGCCTCACTCGATGAGGCTGAGTCTTTAGGATTAGCACAATTTGATAAGATCTTAA
TTGCTGCTAGCATTCGTTACGGTAAGCATAGACCTGAGCTGTACCAGTTTATTAACCGTCATCACGCGGTACTGGATGCC
AAGCAAAATGCATTTTTTACCGTGAATGTGGTTGCTCGCAAGCCTGAGAAAAATACCCCAGAAACTAACCCCTATATGAA
GAAGTTTTTGCAGTTATCGCTATGGCAGCCACAGCAGTTAGCCGTATTTGCGGGTAAGATTGATTACCCTAAATATCGCT
TGTTCGATAAGGTGATGATCCGCTTTATTATGTGGATGACCAAGGGCCCAACCGATACTCGCGGAACCTTTGAGTTCACC
GACTGGAACAAGGTCGATGAGTTTGCCCACGCATTTGCGGAGCGTTAA

Upstream 100 bases:

>100_bases
GTTAATTTTCAGCGAGTATAGTGAGCTGAATACAGACCTTTGACCCTAGCTTAAATTAAGATTTTGAATCTAGTTTGAAT
CGGAAAATAGTAGGAAATTA

Downstream 100 bases:

>100_bases
ATCTGCAATAGTTTACGAACAAAAAAGCCTGCTTAATTGCAGGCTTTTTTGTTATGAATTTTTGCTAAGCGCAATATTTA
CGATGCAAGATGGAGATCAC

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MNNTLIIYSTVDGQTKAICEQIKKINQAQNAKVTLASLDEAESLGLAQFDKILIAASIRYGKHRPELYQFINRHHAVLDA
KQNAFFTVNVVARKPEKNTPETNPYMKKFLQLSLWQPQQLAVFAGKIDYPKYRLFDKVMIRFIMWMTKGPTDTRGTFEFT
DWNKVDEFAHAFAER

Sequences:

>Translated_175_residues
MNNTLIIYSTVDGQTKAICEQIKKINQAQNAKVTLASLDEAESLGLAQFDKILIAASIRYGKHRPELYQFINRHHAVLDA
KQNAFFTVNVVARKPEKNTPETNPYMKKFLQLSLWQPQQLAVFAGKIDYPKYRLFDKVMIRFIMWMTKGPTDTRGTFEFT
DWNKVDEFAHAFAER
>Mature_175_residues
MNNTLIIYSTVDGQTKAICEQIKKINQAQNAKVTLASLDEAESLGLAQFDKILIAASIRYGKHRPELYQFINRHHAVLDA
KQNAFFTVNVVARKPEKNTPETNPYMKKFLQLSLWQPQQLAVFAGKIDYPKYRLFDKVMIRFIMWMTKGPTDTRGTFEFT
DWNKVDEFAHAFAER

Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor [H]

COG id: COG4635

COG function: function code CH; Flavodoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790285, Length=170, Percent_Identity=41.7647058823529, Blast_Score=152, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: =1.3.5.3 [H]

Molecular weight: Translated: 20279; Mature: 20279

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTLIIYSTVDGQTKAICEQIKKINQAQNAKVTLASLDEAESLGLAQFDKILIAASIRY
CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCHHHHHHHHHHHHHHC
GKHRPELYQFINRHHAVLDAKQNAFFTVNVVARKPEKNTPETNPYMKKFLQLSLWQPQQL
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHE
AVFAGKIDYPKYRLFDKVMIRFIMWMTKGPTDTRGTFEFTDWNKVDEFAHAFAER
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNNTLIIYSTVDGQTKAICEQIKKINQAQNAKVTLASLDEAESLGLAQFDKILIAASIRY
CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCHHHHHHHHHHHHHHC
GKHRPELYQFINRHHAVLDAKQNAFFTVNVVARKPEKNTPETNPYMKKFLQLSLWQPQQL
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHE
AVFAGKIDYPKYRLFDKVMIRFIMWMTKGPTDTRGTFEFTDWNKVDEFAHAFAER
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]