| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is ycjT [C]
Identifier: 167040816
GI number: 167040816
Start: 2192773
End: 2195115
Strand: Reverse
Name: ycjT [C]
Synonym: Teth514_2193
Alternate gene names: 167040816
Gene position: 2195115-2192773 (Counterclockwise)
Preceding gene: 167040817
Following gene: 167040814
Centisome position: 89.33
GC content: 33.93
Gene sequence:
>2343_bases ATGGCCAACAAAACGAAGAAACCAATTTACCCTTTTGAAGATTGGGTTATAAGAGAGACGCAGTTTAGTATAGATACTAA CTATAGAAATGAAACTATTTTTACTTTAGCAAATGGATATATTGGAATGAGAGGAACTTTTGAGGAAAGATATTCAGGGC CTAAAAATACTTCTTTTAATGGGACGTATATCAATGGGTTTTATGAAATACACGATATAGTTTACCCTGAAGGGGGATAT GGTTTTGCAAAAATAGGGCAGACGATGCTAAATGTTGCTGATAGCAAAATAATAAAATTATATGTAGATGGGGAAGAGTT TGATTTGTTACAAGGGAAAATCCTCTTTTATGAGAGAGTACTTGACATGAAGAAAGGTTTTGTAGAAAGAAAAGTAAAAT GGGAATCCCCTACAGGAAAAATTTTAGAGGTAAAAATAAAGAGAATTGTATCATTAAATAGACAACATTTAGCGGCGATT TCTTTTACTATGCAACCTGTAAATTTTACCGGAAAAATTAGATTTGTTTCCGCTATTGACGGAAATGTTTCAAATATAAA TGATAGTGAAGATGTAAGAGTAGGGTCAAATTTAAAAGGAAAGGTTTTAAAGACTATAGATAAAAGTGTAGAGGGTTTAA AAGGGTGGATTGTTCAAAAGACACAAAAGAGCAATTTCTCCTATGCTTGCGCGATAGACAATGTATTAGTGGCAGATAGC AAATATGAAGTCTCAAATAGTTTAGAAGAAGATGGAGTAAAAGTAATTGTAGATCTAGAGGCTGAAAAAGGCACCTCATA CACTTTGAATAAATTTATTTCCTATTACACTTCAAAGGATTTTGATGAAAATAAATTGGTTGCTCTTGCTTTAGAAGAAA TAGAAAAAGCCAAAAATGACGGCTTTGAAACGATAGAAAAAGAGCAGGAAGAATTTTTGAATTCTTTTTGGAAAGATGCT GATGTAATCATAGAAGGAGATAAAGCTCTGCAGCAAGGCATACGCTTTAATGAATTTCATCTACTTCAATCTGTCGGAAG AGATGGAAAGACAAATATTGCAGCAAAAGGGCTGACTGGAGAAGGTTATGAAGGCCATTATTTTTGGGATTCTGATATCT ATATAATGCCTTTCTTTCTTTATACAAAGCCTGAAATTGCAAAAGCTTTGGTAATGTACAGGTATAATCTTTTGGATGCA GCAAGATCCAGGGCAAAGGAATTAGGTCACAAAGGAGCTTTGTATCCTTGGAGAACGATAGATGGTCCTGAATGTTCTGC TTACTTTCCAGCTGGTACGGCACAGTATCACATAAATGCTGATATAGTTTATGCTTTGAAAAGATATGTAGAAGCGACGA ATGACGTGGATTTTCTTTATGACTACGGTTGTGAAATATTATTTGAAACTGCAAGATTTTGGGAAGATTTAGGAGCGTAT ATTCCTCTTAAGGGCAATAAATTCTGCATAAACTGTGTCACTGGTCCGGATGAGTATACGGCATTAGTTGACAATAACGC TTATACCAATTATATGGCGAAAATGAATTTGGAATATGCCTATGACATTGCAAACAAAATGAAAAAAGAAGTGCCTCAAA AATATCAAAAAGTCGCTTCTAAACTAAATCTAAAGGATGAAGAAATTGTTGCGTGGAAAAAAGCTGCTGACAATATGTAC CTTCCTTATTCAAAAGAACTTGATATTATACCACAGGATGACAGTTTTTTGTATAAAGAAAGGATAACAGTGGATGAAAT ACCTGAGGACCAATTTCCACTTTTATTGCACTGGCATTACCTAAATATTTACAGATATCAAATATGCAAACAGCCTGATG TGTTGCTTTTGATGTTTTTACAGAGAGAAAAATTTACTAAAGATGAACTTAAAAAGAATTACGATTATTATGAACCTATT ACCACTCACGACTCCTCCTTGTCGCCAGCTATATTTAGCATACTAGCCAATGAAATAGGATATACTGACAAGGCTTATAA ATACTTTATGATGACTGCAAGAATGGATTTGGATGACTACAATGACAATGTTAAGGACGGAATTCACGCTGCTTCTATGG CAGGGACATGGAGCGCAGTTGTGAATGGTTTTGGTGGAATGAGGGTTTATACAAATGAACTGCATTTTGAGCCGAGATTG CCAAAAGAATGGAATTTGCTCTCTTTTAATGTGAGATACAAAGGGAGAAAAATAAATGTCAAATTAACCAAAGAAAATGT TGTGTTTGCATTATTAGAAGGAGAGCCTATAGAAATCTACTACTTTGACAAAAAAATTTTACTTGAAAAAGGAGAAAATA AAGTAGAAAGTCTCAAAAATTAA
Upstream 100 bases:
>100_bases AGAAAGCTGCAGAAAGCAAGTAAATGTTTTAAATTGTTTTAGTCGGAAACGACTTTGTTTCCGACTAAAATTTTGAATAA AGTAAGAGTGGAGGATGGAT
Downstream 100 bases:
>100_bases AGAAGTATGGAGCCATTGGCACCATACTTCTTTAATTTTTTTATATGTCGTTACTTGAAAGGGTGAGTGACCCGCCTCCT ACACTTAAATCAAAGTAATA
Product: Kojibiose phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 780; Mature: 779
Protein sequence:
>780_residues MANKTKKPIYPFEDWVIRETQFSIDTNYRNETIFTLANGYIGMRGTFEERYSGPKNTSFNGTYINGFYEIHDIVYPEGGY GFAKIGQTMLNVADSKIIKLYVDGEEFDLLQGKILFYERVLDMKKGFVERKVKWESPTGKILEVKIKRIVSLNRQHLAAI SFTMQPVNFTGKIRFVSAIDGNVSNINDSEDVRVGSNLKGKVLKTIDKSVEGLKGWIVQKTQKSNFSYACAIDNVLVADS KYEVSNSLEEDGVKVIVDLEAEKGTSYTLNKFISYYTSKDFDENKLVALALEEIEKAKNDGFETIEKEQEEFLNSFWKDA DVIIEGDKALQQGIRFNEFHLLQSVGRDGKTNIAAKGLTGEGYEGHYFWDSDIYIMPFFLYTKPEIAKALVMYRYNLLDA ARSRAKELGHKGALYPWRTIDGPECSAYFPAGTAQYHINADIVYALKRYVEATNDVDFLYDYGCEILFETARFWEDLGAY IPLKGNKFCINCVTGPDEYTALVDNNAYTNYMAKMNLEYAYDIANKMKKEVPQKYQKVASKLNLKDEEIVAWKKAADNMY LPYSKELDIIPQDDSFLYKERITVDEIPEDQFPLLLHWHYLNIYRYQICKQPDVLLLMFLQREKFTKDELKKNYDYYEPI TTHDSSLSPAIFSILANEIGYTDKAYKYFMMTARMDLDDYNDNVKDGIHAASMAGTWSAVVNGFGGMRVYTNELHFEPRL PKEWNLLSFNVRYKGRKINVKLTKENVVFALLEGEPIEIYYFDKKILLEKGENKVESLKN
Sequences:
>Translated_780_residues MANKTKKPIYPFEDWVIRETQFSIDTNYRNETIFTLANGYIGMRGTFEERYSGPKNTSFNGTYINGFYEIHDIVYPEGGY GFAKIGQTMLNVADSKIIKLYVDGEEFDLLQGKILFYERVLDMKKGFVERKVKWESPTGKILEVKIKRIVSLNRQHLAAI SFTMQPVNFTGKIRFVSAIDGNVSNINDSEDVRVGSNLKGKVLKTIDKSVEGLKGWIVQKTQKSNFSYACAIDNVLVADS KYEVSNSLEEDGVKVIVDLEAEKGTSYTLNKFISYYTSKDFDENKLVALALEEIEKAKNDGFETIEKEQEEFLNSFWKDA DVIIEGDKALQQGIRFNEFHLLQSVGRDGKTNIAAKGLTGEGYEGHYFWDSDIYIMPFFLYTKPEIAKALVMYRYNLLDA ARSRAKELGHKGALYPWRTIDGPECSAYFPAGTAQYHINADIVYALKRYVEATNDVDFLYDYGCEILFETARFWEDLGAY IPLKGNKFCINCVTGPDEYTALVDNNAYTNYMAKMNLEYAYDIANKMKKEVPQKYQKVASKLNLKDEEIVAWKKAADNMY LPYSKELDIIPQDDSFLYKERITVDEIPEDQFPLLLHWHYLNIYRYQICKQPDVLLLMFLQREKFTKDELKKNYDYYEPI TTHDSSLSPAIFSILANEIGYTDKAYKYFMMTARMDLDDYNDNVKDGIHAASMAGTWSAVVNGFGGMRVYTNELHFEPRL PKEWNLLSFNVRYKGRKINVKLTKENVVFALLEGEPIEIYYFDKKILLEKGENKVESLKN >Mature_779_residues ANKTKKPIYPFEDWVIRETQFSIDTNYRNETIFTLANGYIGMRGTFEERYSGPKNTSFNGTYINGFYEIHDIVYPEGGYG FAKIGQTMLNVADSKIIKLYVDGEEFDLLQGKILFYERVLDMKKGFVERKVKWESPTGKILEVKIKRIVSLNRQHLAAIS FTMQPVNFTGKIRFVSAIDGNVSNINDSEDVRVGSNLKGKVLKTIDKSVEGLKGWIVQKTQKSNFSYACAIDNVLVADSK YEVSNSLEEDGVKVIVDLEAEKGTSYTLNKFISYYTSKDFDENKLVALALEEIEKAKNDGFETIEKEQEEFLNSFWKDAD VIIEGDKALQQGIRFNEFHLLQSVGRDGKTNIAAKGLTGEGYEGHYFWDSDIYIMPFFLYTKPEIAKALVMYRYNLLDAA RSRAKELGHKGALYPWRTIDGPECSAYFPAGTAQYHINADIVYALKRYVEATNDVDFLYDYGCEILFETARFWEDLGAYI PLKGNKFCINCVTGPDEYTALVDNNAYTNYMAKMNLEYAYDIANKMKKEVPQKYQKVASKLNLKDEEIVAWKKAADNMYL PYSKELDIIPQDDSFLYKERITVDEIPEDQFPLLLHWHYLNIYRYQICKQPDVLLLMFLQREKFTKDELKKNYDYYEPIT THDSSLSPAIFSILANEIGYTDKAYKYFMMTARMDLDDYNDNVKDGIHAASMAGTWSAVVNGFGGMRVYTNELHFEPRLP KEWNLLSFNVRYKGRKINVKLTKENVVFALLEGEPIEIYYFDKKILLEKGENKVESLKN
Specific function: Unknown
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=457, Percent_Identity=24.0700218818381, Blast_Score=133, Evalue=8e-31, Organism=Escherichia coli, GI1787575, Length=773, Percent_Identity=27.4256144890039, Blast_Score=325, Evalue=8e-90, Organism=Saccharomyces cerevisiae, GI6325283, Length=257, Percent_Identity=28.0155642023346, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI24583760, Length=336, Percent_Identity=24.702380952381, Blast_Score=90, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 89996; Mature: 89865
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKTKKPIYPFEDWVIRETQFSIDTNYRNETIFTLANGYIGMRGTFEERYSGPKNTSFN CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCEECCCCHHHHCCCCCCCCCC GTYINGFYEIHDIVYPEGGYGFAKIGQTMLNVADSKIIKLYVDGEEFDLLQGKILFYERV CEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEHHCCHHHHHHHH LDMKKGFVERKVKWESPTGKILEVKIKRIVSLNRQHLAAISFTMQPVNFTGKIRFVSAID HHHHHHHHHCEEEECCCCCCEEHEEHHHHHHCCHHHEEEEEEEEECCCCCEEEEEEEEEC GNVSNINDSEDVRVGSNLKGKVLKTIDKSVEGLKGWIVQKTQKSNFSYACAIDNVLVADS CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCEEEECC KYEVSNSLEEDGVKVIVDLEAEKGTSYTLNKFISYYTSKDFDENKLVALALEEIEKAKND CCHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCC GFETIEKEQEEFLNSFWKDADVIIEGDKALQQGIRFNEFHLLQSVGRDGKTNIAAKGLTG CHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCHHHHHHHHCCCCCCCEEEECCCC EGYEGHYFWDSDIYIMPFFLYTKPEIAKALVMYRYNLLDAARSRAKELGHKGALYPWRTI CCCCCCEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DGPECSAYFPAGTAQYHINADIVYALKRYVEATNDVDFLYDYGCEILFETARFWEDLGAY CCCCCCEECCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCE IPLKGNKFCINCVTGPDEYTALVDNNAYTNYMAKMNLEYAYDIANKMKKEVPQKYQKVAS EEECCCEEEEEEECCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH KLNLKDEEIVAWKKAADNMYLPYSKELDIIPQDDSFLYKERITVDEIPEDQFPLLLHWHY HCCCCCHHHEEEHHCCCCEECCCCCCCCEEECCCCEEEEECCCHHCCCCCCCCEEEEEEE LNIYRYQICKQPDVLLLMFLQREKFTKDELKKNYDYYEPITTHDSSLSPAIFSILANEIG HHEEEEHHCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC YTDKAYKYFMMTARMDLDDYNDNVKDGIHAASMAGTWSAVVNGFGGMRVYTNELHFEPRL CCCHHEEEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEEECCCC PKEWNLLSFNVRYKGRKINVKLTKENVVFALLEGEPIEIYYFDKKILLEKGENKVESLKN CCCCCEEEEEEEECCEEEEEEEEECCEEEEEECCCEEEEEEECCEEEEECCCCHHHHHCC >Mature Secondary Structure ANKTKKPIYPFEDWVIRETQFSIDTNYRNETIFTLANGYIGMRGTFEERYSGPKNTSFN CCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCEECCCCHHHHCCCCCCCCCC GTYINGFYEIHDIVYPEGGYGFAKIGQTMLNVADSKIIKLYVDGEEFDLLQGKILFYERV CEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEHHCCHHHHHHHH LDMKKGFVERKVKWESPTGKILEVKIKRIVSLNRQHLAAISFTMQPVNFTGKIRFVSAID HHHHHHHHHCEEEECCCCCCEEHEEHHHHHHCCHHHEEEEEEEEECCCCCEEEEEEEEEC GNVSNINDSEDVRVGSNLKGKVLKTIDKSVEGLKGWIVQKTQKSNFSYACAIDNVLVADS CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCEEEECC KYEVSNSLEEDGVKVIVDLEAEKGTSYTLNKFISYYTSKDFDENKLVALALEEIEKAKND CCHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCC GFETIEKEQEEFLNSFWKDADVIIEGDKALQQGIRFNEFHLLQSVGRDGKTNIAAKGLTG CHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCHHHHHHHHCCCCCCCEEEECCCC EGYEGHYFWDSDIYIMPFFLYTKPEIAKALVMYRYNLLDAARSRAKELGHKGALYPWRTI CCCCCCEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DGPECSAYFPAGTAQYHINADIVYALKRYVEATNDVDFLYDYGCEILFETARFWEDLGAY CCCCCCEECCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCE IPLKGNKFCINCVTGPDEYTALVDNNAYTNYMAKMNLEYAYDIANKMKKEVPQKYQKVAS EEECCCEEEEEEECCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH KLNLKDEEIVAWKKAADNMYLPYSKELDIIPQDDSFLYKERITVDEIPEDQFPLLLHWHY HCCCCCHHHEEEHHCCCCEECCCCCCCCEEECCCCEEEEECCCHHCCCCCCCCEEEEEEE LNIYRYQICKQPDVLLLMFLQREKFTKDELKKNYDYYEPITTHDSSLSPAIFSILANEIG HHEEEEHHCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC YTDKAYKYFMMTARMDLDDYNDNVKDGIHAASMAGTWSAVVNGFGGMRVYTNELHFEPRL CCCHHEEEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEEECCCC PKEWNLLSFNVRYKGRKINVKLTKENVVFALLEGEPIEIYYFDKKILLEKGENKVESLKN CCCCCEEEEEEEECCEEEEEEEEECCEEEEEECCCEEEEEEECCEEEEECCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]