Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

Click here to switch to the map view.

The map label for this gene is 167040817

Identifier: 167040817

GI number: 167040817

Start: 2195193

End: 2196437

Strand: Reverse

Name: 167040817

Synonym: Teth514_2194

Alternate gene names: NA

Gene position: 2196437-2195193 (Counterclockwise)

Preceding gene: 167040818

Following gene: 167040816

Centisome position: 89.39

GC content: 37.83

Gene sequence:

>1245_bases
ATGAAGAAGTTTTACACTAAGTTAATAGCAGTTTTAATCATTATCTCGCTTCTAGGTACTGTTATTGCAGGCTGTGGCAG
CAAGACCCAATCAGAAGCGAGGAAAAAAGTTTTGAAAGTTTCAATGGGACTTGGAGAAGCAGAATGGAAAGTGATGAAAG
AAGATATTTTCCCACCATTTGAGCAAAAGTATGGTGTAAAAATTGAACCTCTTCAAATCGAAGCAGGAGACCTTATTAAA
AAATTAGATGCTATGCACAAAGCAAATGCGATGGATATAGACATTATCACACAAGATAACATGCAACTTGCTCCACTTGT
TGCAAAAGGGCTTGTGGAAGATTTGTCTCAGTATAGAGACATGATACCAAAGGAAGTAATACCAAGTCTTGTGCCAGTAG
GAGAGTTTGATGGAAAGTTGTACTTTATGCCGTATAGACCAAATGTAGAAATAGCTTTCTACAACGAAGATAAATTCAAC
GAATACGGTTTAAAACTACCTACAAATTGGGATGAGCTTTTACAGGTTGCAAAGACTTTTAAAGAAAAAGAGGGCATAGG
TAGAGTCATAATTAAAGAAAATTTAGGGCCTGACAGCACAGTCCACATGTTTGACCTTATAAGGTCTGCTGGTGGTGACC
CAACAGTATTGAATGATGAGGGTTCAATAAAAGCATTTACTTTCTTGAAAGAAATACAGCCATATCTCTCTCCTGACTCA
AAGAAAGCTGACTGGAATACACCTGTAGAATATCTTGCAAAAGAGAGCGTATATTTGGTTCAAAATTGGCCGTACACTGC
AAACGTTCTTGTAGAGCAGTATGGAAAAAAGAACATTTTGGCATATCACGGATGGACAGGTCCGGTTAAAGAGTCCCACG
TTTTGGGAGGAGAAGTTATAGGAATACCAACTGGTGCACCTAATAAAGAGATGGCTATAAAGTTTATGGAATACCTTATG
AGTAAAGAAGTTCAAGAGAAACTTGTCACTAAATTAGGATGGCCATCCATGAGAAGTGACGCTTATGGGAAGGTTGCAGA
GTGGCAAAAACCATATTTTGAAGCTATAAATGAAGCGTTAAAACATGCAGAACCAAGGCCAAACCTTGTATACTGGGCTG
ATGTGGACAAAGCTATAAATGGAGCATTGAGAGAAATAATATTTGAAGGCAAAGATATCAAGACAACTCTTGACAAATAT
CACAACATGATAGAAGAAGCTAAGAAAGCTGCAGAAAGCAAGTAA

Upstream 100 bases:

>100_bases
GGATATCTTGCAGGGGCTGTAAAAGGTTAGTATATACGTATCCGAGTTTTTCGGATACTGTATATATAAAAATTAAATTT
TAAGGAGGTTTTATTAAGCT

Downstream 100 bases:

>100_bases
ATGTTTTAAATTGTTTTAGTCGGAAACGACTTTGTTTCCGACTAAAATTTTGAATAAAGTAAGAGTGGAGGATGGATATG
GCCAACAAAACGAAGAAACC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: ABC-Type Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKKFYTKLIAVLIIISLLGTVIAGCGSKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPPFEQKYGVKIEPLQIEAGDLIK
KLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYRDMIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFN
EYGLKLPTNWDELLQVAKTFKEKEGIGRVIIKENLGPDSTVHMFDLIRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSPDS
KKADWNTPVEYLAKESVYLVQNWPYTANVLVEQYGKKNILAYHGWTGPVKESHVLGGEVIGIPTGAPNKEMAIKFMEYLM
SKEVQEKLVTKLGWPSMRSDAYGKVAEWQKPYFEAINEALKHAEPRPNLVYWADVDKAINGALREIIFEGKDIKTTLDKY
HNMIEEAKKAAESK

Sequences:

>Translated_414_residues
MKKFYTKLIAVLIIISLLGTVIAGCGSKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPPFEQKYGVKIEPLQIEAGDLIK
KLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYRDMIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFN
EYGLKLPTNWDELLQVAKTFKEKEGIGRVIIKENLGPDSTVHMFDLIRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSPDS
KKADWNTPVEYLAKESVYLVQNWPYTANVLVEQYGKKNILAYHGWTGPVKESHVLGGEVIGIPTGAPNKEMAIKFMEYLM
SKEVQEKLVTKLGWPSMRSDAYGKVAEWQKPYFEAINEALKHAEPRPNLVYWADVDKAINGALREIIFEGKDIKTTLDKY
HNMIEEAKKAAESK
>Mature_414_residues
MKKFYTKLIAVLIIISLLGTVIAGCGSKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPPFEQKYGVKIEPLQIEAGDLIK
KLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYRDMIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFN
EYGLKLPTNWDELLQVAKTFKEKEGIGRVIIKENLGPDSTVHMFDLIRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSPDS
KKADWNTPVEYLAKESVYLVQNWPYTANVLVEQYGKKNILAYHGWTGPVKESHVLGGEVIGIPTGAPNKEMAIKFMEYLM
SKEVQEKLVTKLGWPSMRSDAYGKVAEWQKPYFEAINEALKHAEPRPNLVYWADVDKAINGALREIIFEGKDIKTTLDKY
HNMIEEAKKAAESK

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46790; Mature: 46790

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFYTKLIAVLIIISLLGTVIAGCGSKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPPF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
EQKYGVKIEPLQIEAGDLIKKLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYRD
HHCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
MIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFNEYGLKLPTNWDELLQVAKTF
CCCHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
KEKEGIGRVIIKENLGPDSTVHMFDLIRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSPDS
HHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHCCCCC
KKADWNTPVEYLAKESVYLVQNWPYTANVLVEQYGKKNILAYHGWTGPVKESHVLGGEVI
CCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEE
GIPTGAPNKEMAIKFMEYLMSKEVQEKLVTKLGWPSMRSDAYGKVAEWQKPYFEAINEAL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHH
KHAEPRPNLVYWADVDKAINGALREIIFEGKDIKTTLDKYHNMIEEAKKAAESK
HCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKFYTKLIAVLIIISLLGTVIAGCGSKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPPF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
EQKYGVKIEPLQIEAGDLIKKLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYRD
HHCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
MIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFNEYGLKLPTNWDELLQVAKTF
CCCHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
KEKEGIGRVIIKENLGPDSTVHMFDLIRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSPDS
HHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHCCCCC
KKADWNTPVEYLAKESVYLVQNWPYTANVLVEQYGKKNILAYHGWTGPVKESHVLGGEVI
CCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEE
GIPTGAPNKEMAIKFMEYLMSKEVQEKLVTKLGWPSMRSDAYGKVAEWQKPYFEAINEAL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHH
KHAEPRPNLVYWADVDKAINGALREIIFEGKDIKTTLDKYHNMIEEAKKAAESK
HCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA