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The map label for this gene is ywhC [H]

Identifier: 167040203

GI number: 167040203

Start: 1585363

End: 1585971

Strand: Direct

Name: ywhC [H]

Synonym: Teth514_1565

Alternate gene names: 167040203

Gene position: 1585363-1585971 (Clockwise)

Preceding gene: 167040202

Following gene: 167040204

Centisome position: 64.52

GC content: 35.96

Gene sequence:

>609_bases
TTGATAGATTTTATAGATTTTTTATATAGAATACCTGCACTTCTTATTGCGATGAGTTTCCACGAATTTAGTCATGGTTA
TGTGGCAGATAAATTGGGGGACCCTACTCCAAGGCAAAGTGGTAGGCTTACATTAAATCCGTTGGCTCATATTGACCCCA
TTGGTCTTTTAATGCTTTGGCTTTTAAGGTTTGGGTGGGCGAAACCTGTTCCTATTAATCCTTTATATTTTAGAGATAGA
AAAAAAGGTGTATTGCTTGTATCTTTAGCAGGCCCTCTTTCCAACGTCTTGTTGGCTATCGTTTCTCGAATATTGATGAT
AGCATTTAAAGATGTCCCAATATTGTATCCACTTTTATATCTATTGTACATTTACAATTTAGTTTTTGCTGTTTTCAATA
TAATACCTGTGCCGCCTTTGGATGGTTCAAAAGTATTGTGGAGTTTATTACCCCCAAGAGAAGCTTATATGATTTCTCAA
TATGAAATGTATGGGCAGGTTATTTTGCTCCTTCTTGTTTTCACTGGGGTTATAGGACAAATTATGGGGCCTCTTATGAA
TGCTTTGGACTCTTTTATAACTCTTATTTTAAAGCCTTTTGGGGTGTGA

Upstream 100 bases:

>100_bases
ATGTGTTTGAGGCGAAAATTAATGGAATTATTGCTACAAGAGATGAAGAAATTGCATTTTTGAAAAAACTGATAGAAAAA
TTAAAGAAAGGAGAATAAAT

Downstream 100 bases:

>100_bases
AGATGTACAACGTAAAATTAGAAGTGTTTGAAGGACCTTTTGATTTACTTTTTCACCTTATAGAAAAAAATGAAATTGAT
TTGATGGATATCCCGATTTC

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MIDFIDFLYRIPALLIAMSFHEFSHGYVADKLGDPTPRQSGRLTLNPLAHIDPIGLLMLWLLRFGWAKPVPINPLYFRDR
KKGVLLVSLAGPLSNVLLAIVSRILMIAFKDVPILYPLLYLLYIYNLVFAVFNIIPVPPLDGSKVLWSLLPPREAYMISQ
YEMYGQVILLLLVFTGVIGQIMGPLMNALDSFITLILKPFGV

Sequences:

>Translated_202_residues
MIDFIDFLYRIPALLIAMSFHEFSHGYVADKLGDPTPRQSGRLTLNPLAHIDPIGLLMLWLLRFGWAKPVPINPLYFRDR
KKGVLLVSLAGPLSNVLLAIVSRILMIAFKDVPILYPLLYLLYIYNLVFAVFNIIPVPPLDGSKVLWSLLPPREAYMISQ
YEMYGQVILLLLVFTGVIGQIMGPLMNALDSFITLILKPFGV
>Mature_202_residues
MIDFIDFLYRIPALLIAMSFHEFSHGYVADKLGDPTPRQSGRLTLNPLAHIDPIGLLMLWLLRFGWAKPVPINPLYFRDR
KKGVLLVSLAGPLSNVLLAIVSRILMIAFKDVPILYPLLYLLYIYNLVFAVFNIIPVPPLDGSKVLWSLLPPREAYMISQ
YEMYGQVILLLLVFTGVIGQIMGPLMNALDSFITLILKPFGV

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 22800; Mature: 22800

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFIDFLYRIPALLIAMSFHEFSHGYVADKLGDPTPRQSGRLTLNPLAHIDPIGLLMLW
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEECCHHHCCHHHHHHHH
LLRFGWAKPVPINPLYFRDRKKGVLLVSLAGPLSNVLLAIVSRILMIAFKDVPILYPLLY
HHHHCCCCCCCCCCCEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LLYIYNLVFAVFNIIPVPPLDGSKVLWSLLPPREAYMISQYEMYGQVILLLLVFTGVIGQ
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMGPLMNALDSFITLILKPFGV
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDFIDFLYRIPALLIAMSFHEFSHGYVADKLGDPTPRQSGRLTLNPLAHIDPIGLLMLW
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEECCHHHCCHHHHHHHH
LLRFGWAKPVPINPLYFRDRKKGVLLVSLAGPLSNVLLAIVSRILMIAFKDVPILYPLLY
HHHHCCCCCCCCCCCEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LLYIYNLVFAVFNIIPVPPLDGSKVLWSLLPPREAYMISQYEMYGQVILLLLVFTGVIGQ
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMGPLMNALDSFITLILKPFGV
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]