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The map label for this gene is scpA

Identifier: 167040204

GI number: 167040204

Start: 1585974

End: 1586705

Strand: Direct

Name: scpA

Synonym: Teth514_1566

Alternate gene names: 167040204

Gene position: 1585974-1586705 (Clockwise)

Preceding gene: 167040203

Following gene: 167040205

Centisome position: 64.54

GC content: 27.87

Gene sequence:

>732_bases
ATGTACAACGTAAAATTAGAAGTGTTTGAAGGACCTTTTGATTTACTTTTTCACCTTATAGAAAAAAATGAAATTGATTT
GATGGATATCCCGATTTCAGTTATTTTAGATCAATATATGGAATATATTAAAACTTTGCAGGAAATGGATTTAAATGTGG
CATCAGAATTTATTGTAATGGCAGCTACTTTATTAGAAATTAAATCTAAAATGTTACTTCCCAAACAGAAGTTTGAGGGA
CAACAATTGGAAATGGAAGAAGTAGACCCAAGAGAAGAATTGGTAACTAAATTGATTGAGTACAAGAAATATAAAATTAT
TGCCCAGACTTTTAAAGAAATGTGCAAAATTGGTTCTCGTTTTTTTAGAGAAGAGCCTGAAGTAAAATACATAGATAAAA
AAATTGCTTTTAACTACTCTAGTGAAGATATATATAAGGCGTATCTTAAAGTTATTTCAAAAAATAATGCCAAAGAAGAT
GAAATAGAAATAAAAAAAGATGAATATACTGTAGAGAGTAAGATTAAAGAGTTATTAGTGAAATTGGTAAAAAAAACTGT
CCTTTGGTTTAGTGAATTTATTAAGAAAAGTCGGGCAAAAGGAGAAATTATTGTATCTTTTATTGCTGTTTTAGAGTTAG
TGAGATTAAATAAAATTATAGCAGAACAAAAGACTACTTATGGGGATATACTTATTAAATCCTTTGGGAGAGGAGAAAAA
AATGAGCAATGA

Upstream 100 bases:

>100_bases
TTCTTGTTTTCACTGGGGTTATAGGACAAATTATGGGGCCTCTTATGAATGCTTTGGACTCTTTTATAACTCTTATTTTA
AAGCCTTTTGGGGTGTGAAG

Downstream 100 bases:

>100_bases
AGGAAAAATAGAAGCTATATTGTTCGCAGCAGGGGGACCAGTAAAATTAAGAACCCTATGCGAAGTGGTAGGACTTTCTC
AAGAGGAAATAGTAGATGTT

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MYNVKLEVFEGPFDLLFHLIEKNEIDLMDIPISVILDQYMEYIKTLQEMDLNVASEFIVMAATLLEIKSKMLLPKQKFEG
QQLEMEEVDPREELVTKLIEYKKYKIIAQTFKEMCKIGSRFFREEPEVKYIDKKIAFNYSSEDIYKAYLKVISKNNAKED
EIEIKKDEYTVESKIKELLVKLVKKTVLWFSEFIKKSRAKGEIIVSFIAVLELVRLNKIIAEQKTTYGDILIKSFGRGEK
NEQ

Sequences:

>Translated_243_residues
MYNVKLEVFEGPFDLLFHLIEKNEIDLMDIPISVILDQYMEYIKTLQEMDLNVASEFIVMAATLLEIKSKMLLPKQKFEG
QQLEMEEVDPREELVTKLIEYKKYKIIAQTFKEMCKIGSRFFREEPEVKYIDKKIAFNYSSEDIYKAYLKVISKNNAKED
EIEIKKDEYTVESKIKELLVKLVKKTVLWFSEFIKKSRAKGEIIVSFIAVLELVRLNKIIAEQKTTYGDILIKSFGRGEK
NEQ
>Mature_243_residues
MYNVKLEVFEGPFDLLFHLIEKNEIDLMDIPISVILDQYMEYIKTLQEMDLNVASEFIVMAATLLEIKSKMLLPKQKFEG
QQLEMEEVDPREELVTKLIEYKKYKIIAQTFKEMCKIGSRFFREEPEVKYIDKKIAFNYSSEDIYKAYLKVISKNNAKED
EIEIKKDEYTVESKIKELLVKLVKKTVLWFSEFIKKSRAKGEIIVSFIAVLELVRLNKIIAEQKTTYGDILIKSFGRGEK
NEQ

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_THEP3 (B0K9H1)

Other databases:

- EMBL:   CP000924
- RefSeq:   YP_001665120.1
- GeneID:   5875315
- GenomeReviews:   CP000924_GR
- KEGG:   tpd:Teth39_1129
- HOGENOM:   HBG728383
- OMA:   YLLKINI
- ProtClustDB:   CLSK901173
- BioCyc:   TPSE340099:TETH39_1129-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR003768

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 28640; Mature: 28640

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNVKLEVFEGPFDLLFHLIEKNEIDLMDIPISVILDQYMEYIKTLQEMDLNVASEFIVM
CCCEEEEEECCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AATLLEIKSKMLLPKQKFEGQQLEMEEVDPREELVTKLIEYKKYKIIAQTFKEMCKIGSR
HHHHHHHHHHHCCCHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFREEPEVKYIDKKIAFNYSSEDIYKAYLKVISKNNAKEDEIEIKKDEYTVESKIKELLV
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHEEECHHHHHHHHHHHHHHH
KLVKKTVLWFSEFIKKSRAKGEIIVSFIAVLELVRLNKIIAEQKTTYGDILIKSFGRGEK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
NEQ
CCC
>Mature Secondary Structure
MYNVKLEVFEGPFDLLFHLIEKNEIDLMDIPISVILDQYMEYIKTLQEMDLNVASEFIVM
CCCEEEEEECCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AATLLEIKSKMLLPKQKFEGQQLEMEEVDPREELVTKLIEYKKYKIIAQTFKEMCKIGSR
HHHHHHHHHHHCCCHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFREEPEVKYIDKKIAFNYSSEDIYKAYLKVISKNNAKEDEIEIKKDEYTVESKIKELLV
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHEEECHHHHHHHHHHHHHHH
KLVKKTVLWFSEFIKKSRAKGEIIVSFIAVLELVRLNKIIAEQKTTYGDILIKSFGRGEK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
NEQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA