| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039643
Identifier: 167039643
GI number: 167039643
Start: 1022996
End: 1023910
Strand: Direct
Name: 167039643
Synonym: Teth514_0991
Alternate gene names: NA
Gene position: 1022996-1023910 (Clockwise)
Preceding gene: 167039642
Following gene: 167039644
Centisome position: 41.63
GC content: 31.91
Gene sequence:
>915_bases ATGAAACTGGGTTTTGTAAGCGCAATATTGGAAGAATTAAGTTTTGAGGAAGTTATAGATTTTGCTTCGCAAAATGAGTT TTCATGTGTGGAGATTATGTGTTGGCCCAAAGGAGAAGCTGAGAGACGATATGCAGGAGTGACTCATATAGATGTTTCCG AAATTGATGAGGGAAAAGTAAATTATATTAAGAATTACCTCAATAAAGCAGGTATAGAAATTTCAGCGCTAGGATATTAT CCTAATCCTTTAGATCCCGATCCGGAAAAGCGTGAATTTTATATAGAACACATAAAAAAAGGAATAAAAGCGGCAAATAA ACTTGGCATAAAAAATTTCAATACTTTTATTGGAAGAGATCAAACTAAAAATGTTGAAGAAAACTTAAAAATGTTTGTAG AGGTATGGAAACCAATAATCAAATTCGCTGAAGAACACAACGTGAGAGTTTTAATTGAAAATTGTCCTATGCTTTTTACA AATGACGAATGGCCTGGTGGGAAAAATTTAGCAACCACTCCTGCTATATGGCGAAGAATGTTTGAACTTATTCCAAGTGA GAATTTTGGGTTAAATTACGATCCTTCACATTTTGTATGGCAACAAATGGATTATATAAAGCCATTATATGAGTTTAAAG ATAAGATACATCATATACATTTTAAAGATACTAAAATTTTTAAAAATAAATTGGATGAAGTTGGAATTCTTGCAACACCT CTCGAATATCAATCACCAAAAATTCCGGGTCTTGGCGATATAGATTGGAAAAAATTTATATCAGCGCTTTATGACATAAA ATATGAAGGTCCTGCTTGCATAGAAGTGGAGGATAAAGCTTTTGAAGATTCTTTAGAGCATAAAAAACGTGCATTAATAA TGAGCAAGAATTATCTAAAACAATTCATTGTATAA
Upstream 100 bases:
>100_bases GTGTTATTATAATTTTGGCAGTAGCTTTGGGAAGCAAAACAAATACAAAAAATTAAAGCATTATCAAAATTTTAATAATA AAAGAGGAGGAACTCATCGA
Downstream 100 bases:
>100_bases TTTTACGAAACTTGCATTTCATGAGGTTAAATTTTCTTAGAAAATATAGCTAACAAAAATAATAAAGGTGATGAGAAGAA TGAGAATTGGCGTTGACCTT
Product: xylose isomerase domain-containing protein
Products: NA
Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; AP-Endonuclease/AP-Lyase; Xylose Isomerase-Like Protein; Xylose Isomerase Domain Protein Tim Barrel; AP Endonuclease; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel; Isomerase/Epimerase; Xylose Isomerase Domain Protein; Xylose Isomerase-Like; Xylose Isomerase-Like TIM Barrel; Xlose Isomerase Domain-Containing Protein
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKLGFVSAILEELSFEEVIDFASQNEFSCVEIMCWPKGEAERRYAGVTHIDVSEIDEGKVNYIKNYLNKAGIEISALGYY PNPLDPDPEKREFYIEHIKKGIKAANKLGIKNFNTFIGRDQTKNVEENLKMFVEVWKPIIKFAEEHNVRVLIENCPMLFT NDEWPGGKNLATTPAIWRRMFELIPSENFGLNYDPSHFVWQQMDYIKPLYEFKDKIHHIHFKDTKIFKNKLDEVGILATP LEYQSPKIPGLGDIDWKKFISALYDIKYEGPACIEVEDKAFEDSLEHKKRALIMSKNYLKQFIV
Sequences:
>Translated_304_residues MKLGFVSAILEELSFEEVIDFASQNEFSCVEIMCWPKGEAERRYAGVTHIDVSEIDEGKVNYIKNYLNKAGIEISALGYY PNPLDPDPEKREFYIEHIKKGIKAANKLGIKNFNTFIGRDQTKNVEENLKMFVEVWKPIIKFAEEHNVRVLIENCPMLFT NDEWPGGKNLATTPAIWRRMFELIPSENFGLNYDPSHFVWQQMDYIKPLYEFKDKIHHIHFKDTKIFKNKLDEVGILATP LEYQSPKIPGLGDIDWKKFISALYDIKYEGPACIEVEDKAFEDSLEHKKRALIMSKNYLKQFIV >Mature_304_residues MKLGFVSAILEELSFEEVIDFASQNEFSCVEIMCWPKGEAERRYAGVTHIDVSEIDEGKVNYIKNYLNKAGIEISALGYY PNPLDPDPEKREFYIEHIKKGIKAANKLGIKNFNTFIGRDQTKNVEENLKMFVEVWKPIIKFAEEHNVRVLIENCPMLFT NDEWPGGKNLATTPAIWRRMFELIPSENFGLNYDPSHFVWQQMDYIKPLYEFKDKIHHIHFKDTKIFKNKLDEVGILATP LEYQSPKIPGLGDIDWKKFISALYDIKYEGPACIEVEDKAFEDSLEHKKRALIMSKNYLKQFIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35443; Mature: 35443
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGFVSAILEELSFEEVIDFASQNEFSCVEIMCWPKGEAERRYAGVTHIDVSEIDEGKV CCCHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCEEEEHHHCCCCHH NYIKNYLNKAGIEISALGYYPNPLDPDPEKREFYIEHIKKGIKAANKLGIKNFNTFIGRD HHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC QTKNVEENLKMFVEVWKPIIKFAEEHNVRVLIENCPMLFTNDEWPGGKNLATTPAIWRRM CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCHHHHHHH FELIPSENFGLNYDPSHFVWQQMDYIKPLYEFKDKIHHIHFKDTKIFKNKLDEVGILATP HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCEEECC LEYQSPKIPGLGDIDWKKFISALYDIKYEGPACIEVEDKAFEDSLEHKKRALIMSKNYLK CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH QFIV HHCC >Mature Secondary Structure MKLGFVSAILEELSFEEVIDFASQNEFSCVEIMCWPKGEAERRYAGVTHIDVSEIDEGKV CCCHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCEEEEHHHCCCCHH NYIKNYLNKAGIEISALGYYPNPLDPDPEKREFYIEHIKKGIKAANKLGIKNFNTFIGRD HHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC QTKNVEENLKMFVEVWKPIIKFAEEHNVRVLIENCPMLFTNDEWPGGKNLATTPAIWRRM CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCHHHHHHH FELIPSENFGLNYDPSHFVWQQMDYIKPLYEFKDKIHHIHFKDTKIFKNKLDEVGILATP HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCEEECC LEYQSPKIPGLGDIDWKKFISALYDIKYEGPACIEVEDKAFEDSLEHKKRALIMSKNYLK CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH QFIV HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA