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The map label for this gene is rbsC [H]

Identifier: 167039642

GI number: 167039642

Start: 1021971

End: 1022951

Strand: Direct

Name: rbsC [H]

Synonym: Teth514_0990

Alternate gene names: 167039642

Gene position: 1021971-1022951 (Clockwise)

Preceding gene: 167039641

Following gene: 167039643

Centisome position: 41.59

GC content: 35.37

Gene sequence:

>981_bases
ATGCCATCCAACAATAATACTAGCAAAATAAGATATTGGAATATAAAAAATATCGAATGGCGAAAATATATAGTCTATAT
TGCGTTTGTAATAGTATTTTTATTCTTTGCCATTACTCTTCATGACCAAGGTTTTACGAGTATTTCAAATATATTGAATA
TTACTCGACAGACTGCGATGATTTCTATCATGGCAGTAGCTATGACTTTTGTGATAGGTGCAGCTCAAATTGACTTGTCG
GTTGGTTCTATTACTGCTCTTACTTCTTTAGTTACAGCGTTAATATTAGCTAACAATGGTGGAATCATCATGGCAGTATT
GGGAGGTTTAGCGACGGGAGCAATAATAGGTGCTATTAATGGCTTTTTTATAACCAAGATTAATATTCCTGCTTTTTTAG
TAACCTTAGGAACAATGGGAATTACAAGAGGTTTGGCGATGTGGATTACAGATACTGCGGCAGTACCAATTTCTAATAAC
ACTTATAATTTCATTTTTGGATTAGGAGATATTTATGGCTTCCCTATACTTTTTATATGGACATTAGTTATCTTGATAAT
AGGACATTTTGTTTTGAATTATACCCCCTTTGGCAAATATACGTTAGCGACAGGTGGTAAGGAAGAAGCTGCAAAATATA
CAGGAGTAAATACTCAAAAGATAAAATTTATGGTAATGCTGTTTTCGGGTATTATGGCAAGTTTTGCAGGATTATTGTAT
GCAGGTAGAATGCAAGCAGGAAGATATAGTTATGGCGAGGGGGATGAATTATCAGTTATTGCAGCTGTAATTTTAGGTGG
TACAAGTCTCTCGGGTGGTACAGGATCAGTCATAGGGTCGGTTTTTGGTTCGCTGATGATGGGAATGATCAATAACGGCC
TTATTATTGCGGGACTGAGTGTAAGTCAGCAAATGATCGTGAGAGGTGTTATTATAATTTTGGCAGTAGCTTTGGGAAGC
AAAACAAATACAAAAAATTAA

Upstream 100 bases:

>100_bases
GAATTGCTTGCTGTATGTGATAGGATATTGATATTAAGTAAAGGTAGGATAATAAATGAATATTTACGAAAAGATATTGA
ATCTGAGGAGGTCTTACAAC

Downstream 100 bases:

>100_bases
AGCATTATCAAAATTTTAATAATAAAAGAGGAGGAACTCATCGAATGAAACTGGGTTTTGTAAGCGCAATATTGGAAGAA
TTAAGTTTTGAGGAAGTTAT

Product: monosaccharide-transporting ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MPSNNNTSKIRYWNIKNIEWRKYIVYIAFVIVFLFFAITLHDQGFTSISNILNITRQTAMISIMAVAMTFVIGAAQIDLS
VGSITALTSLVTALILANNGGIIMAVLGGLATGAIIGAINGFFITKINIPAFLVTLGTMGITRGLAMWITDTAAVPISNN
TYNFIFGLGDIYGFPILFIWTLVILIIGHFVLNYTPFGKYTLATGGKEEAAKYTGVNTQKIKFMVMLFSGIMASFAGLLY
AGRMQAGRYSYGEGDELSVIAAVILGGTSLSGGTGSVIGSVFGSLMMGMINNGLIIAGLSVSQQMIVRGVIIILAVALGS
KTNTKN

Sequences:

>Translated_326_residues
MPSNNNTSKIRYWNIKNIEWRKYIVYIAFVIVFLFFAITLHDQGFTSISNILNITRQTAMISIMAVAMTFVIGAAQIDLS
VGSITALTSLVTALILANNGGIIMAVLGGLATGAIIGAINGFFITKINIPAFLVTLGTMGITRGLAMWITDTAAVPISNN
TYNFIFGLGDIYGFPILFIWTLVILIIGHFVLNYTPFGKYTLATGGKEEAAKYTGVNTQKIKFMVMLFSGIMASFAGLLY
AGRMQAGRYSYGEGDELSVIAAVILGGTSLSGGTGSVIGSVFGSLMMGMINNGLIIAGLSVSQQMIVRGVIIILAVALGS
KTNTKN
>Mature_325_residues
PSNNNTSKIRYWNIKNIEWRKYIVYIAFVIVFLFFAITLHDQGFTSISNILNITRQTAMISIMAVAMTFVIGAAQIDLSV
GSITALTSLVTALILANNGGIIMAVLGGLATGAIIGAINGFFITKINIPAFLVTLGTMGITRGLAMWITDTAAVPISNNT
YNFIFGLGDIYGFPILFIWTLVILIIGHFVLNYTPFGKYTLATGGKEEAAKYTGVNTQKIKFMVMLFSGIMASFAGLLYA
GRMQAGRYSYGEGDELSVIAAVILGGTSLSGGTGSVIGSVFGSLMMGMINNGLIIAGLSVSQQMIVRGVIIILAVALGSK
TNTKN

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788896, Length=287, Percent_Identity=36.2369337979094, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1790191, Length=283, Percent_Identity=40.6360424028269, Blast_Score=164, Evalue=7e-42,
Organism=Escherichia coli, GI145693152, Length=297, Percent_Identity=35.6902356902357, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1790524, Length=305, Percent_Identity=34.4262295081967, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI87082395, Length=255, Percent_Identity=34.9019607843137, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1789992, Length=139, Percent_Identity=40.2877697841727, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI145693214, Length=266, Percent_Identity=32.3308270676692, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787793, Length=262, Percent_Identity=29.0076335877863, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1788471, Length=323, Percent_Identity=34.0557275541796, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787794, Length=271, Percent_Identity=25.0922509225092, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34683; Mature: 34551

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSNNNTSKIRYWNIKNIEWRKYIVYIAFVIVFLFFAITLHDQGFTSISNILNITRQTAM
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ISIMAVAMTFVIGAAQIDLSVGSITALTSLVTALILANNGGIIMAVLGGLATGAIIGAIN
HHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHC
GFFITKINIPAFLVTLGTMGITRGLAMWITDTAAVPISNNTYNFIFGLGDIYGFPILFIW
CEEEEEECCCHHHHHHHHHHHHHHHEEEEECCEEEEECCCCEEEEEECHHHHHHHHHHHH
TLVILIIGHFVLNYTPFGKYTLATGGKEEAAKYTGVNTQKIKFMVMLFSGIMASFAGLLY
HHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGRMQAGRYSYGEGDELSVIAAVILGGTSLSGGTGSVIGSVFGSLMMGMINNGLIIAGLS
HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECC
VSQQMIVRGVIIILAVALGSKTNTKN
HHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PSNNNTSKIRYWNIKNIEWRKYIVYIAFVIVFLFFAITLHDQGFTSISNILNITRQTAM
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ISIMAVAMTFVIGAAQIDLSVGSITALTSLVTALILANNGGIIMAVLGGLATGAIIGAIN
HHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHC
GFFITKINIPAFLVTLGTMGITRGLAMWITDTAAVPISNNTYNFIFGLGDIYGFPILFIW
CEEEEEECCCHHHHHHHHHHHHHHHEEEEECCEEEEECCCCEEEEEECHHHHHHHHHHHH
TLVILIIGHFVLNYTPFGKYTLATGGKEEAAKYTGVNTQKIKFMVMLFSGIMASFAGLLY
HHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGRMQAGRYSYGEGDELSVIAAVILGGTSLSGGTGSVIGSVFGSLMMGMINNGLIIAGLS
HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECC
VSQQMIVRGVIIILAVALGSKTNTKN
HHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]