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The map label for this gene is glcT [H]

Identifier: 167039075

GI number: 167039075

Start: 425284

End: 426111

Strand: Direct

Name: glcT [H]

Synonym: Teth514_0414

Alternate gene names: 167039075

Gene position: 425284-426111 (Clockwise)

Preceding gene: 167039074

Following gene: 167039076

Centisome position: 17.31

GC content: 31.16

Gene sequence:

>828_bases
ATGTATCAAGTGGTAAAAGTTCTTAACAATAATGTGTGTATGGCAAAAGACGATAAAGGTATGGAATGCATAGTCGTTGG
AAAAGGTATAGGATTTGGCAAAAGACCAGGTGATATTATTGAAGAAGATAAGTTGGAAAAAATATTCTATGTACAAGAAG
ATGTTAATAAAATTAAGTTTTCTGAGTTGATGGAAAAGATAAGAGGAGATGTAATAGGTATTGCAGAAGAAATAATAGCG
ATGGCAGAAAAAATAAAAGGCAAAAAACTTAATGAGCATATACACATTGCACTTGCTGATCACATTGCCTTTGCGATTGA
AAGAATAAATATGGGAATAGAAATAAAAAATCCTTTTGATATAGAGATAAAAGCTTTATATAAAGATGATTACAATATTG
CATTAAAAGCGTTAGAATTGATAAATCAAAGACTTAACATTTCACTTCCTGAGGATGAGGCGGGTTTTATAGCTCTTCAC
TTGCATGCTGCTTTAGAAAATGCTGGTTTATCAAATACTGTGAAAAATACCAGATTGGTATCTCAATTAGTGTCTACAAT
TGAAAAACACTTAGGTAAGTATATTGACAGAGATTCAATTGATTATATAAGGCTTGTAACCCACTTGCGGTTTGCTATTG
ACAGAGTAGAAAAAAATGCCCCTGTGACAAACGAACTTTTAGTATCAATAAAGAAGAAATTTAAAAAGGCTTACAATATA
GCAATGCAAGTATCAAAAATAATAGAAGACACCCTCCAAAAGAAAGTTCCTGAAGAAGAAACAGGATATATTGCAATACA
CATTCAGCGATTAATCAATACTATTTAA

Upstream 100 bases:

>100_bases
TAGTGGATAAAATTGTAAAAGAATCTTATGGTGAGGAAGTAAAAGCAGGAAAGACAAAGATTATGAGAGTATACCTCAAG
TGAAAAGTGAGGTATTAATT

Downstream 100 bases:

>100_bases
CAAACCCGAACTAAATTTGCTTTTAGTTCGGGTTTTGCAATTTTTATAATCTAAAATTGCAAAATACTATTGACTTTAAG
AGGAGATACATATAAAATAT

Product: transcriptional antiterminator BglG

Products: NA

Alternate protein names: RNA-binding antitermination protein GlcT [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MYQVVKVLNNNVCMAKDDKGMECIVVGKGIGFGKRPGDIIEEDKLEKIFYVQEDVNKIKFSELMEKIRGDVIGIAEEIIA
MAEKIKGKKLNEHIHIALADHIAFAIERINMGIEIKNPFDIEIKALYKDDYNIALKALELINQRLNISLPEDEAGFIALH
LHAALENAGLSNTVKNTRLVSQLVSTIEKHLGKYIDRDSIDYIRLVTHLRFAIDRVEKNAPVTNELLVSIKKKFKKAYNI
AMQVSKIIEDTLQKKVPEEETGYIAIHIQRLINTI

Sequences:

>Translated_275_residues
MYQVVKVLNNNVCMAKDDKGMECIVVGKGIGFGKRPGDIIEEDKLEKIFYVQEDVNKIKFSELMEKIRGDVIGIAEEIIA
MAEKIKGKKLNEHIHIALADHIAFAIERINMGIEIKNPFDIEIKALYKDDYNIALKALELINQRLNISLPEDEAGFIALH
LHAALENAGLSNTVKNTRLVSQLVSTIEKHLGKYIDRDSIDYIRLVTHLRFAIDRVEKNAPVTNELLVSIKKKFKKAYNI
AMQVSKIIEDTLQKKVPEEETGYIAIHIQRLINTI
>Mature_275_residues
MYQVVKVLNNNVCMAKDDKGMECIVVGKGIGFGKRPGDIIEEDKLEKIFYVQEDVNKIKFSELMEKIRGDVIGIAEEIIA
MAEKIKGKKLNEHIHIALADHIAFAIERINMGIEIKNPFDIEIKALYKDDYNIALKALELINQRLNISLPEDEAGFIALH
LHAALENAGLSNTVKNTRLVSQLVSTIEKHLGKYIDRDSIDYIRLVTHLRFAIDRVEKNAPVTNELLVSIKKKFKKAYNI
AMQVSKIIEDTLQKKVPEEETGYIAIHIQRLINTI

Specific function: Mediates the positive regulation of the glucose PTS operon (ptsGHI) by functioning as an antiterminator factor of transcription via its interaction with the RNA-antiterminator (RAT) sequence located upstream of the ptsG gene. The RNA-binding domain of Glc

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI1790160, Length=272, Percent_Identity=32.7205882352941, Blast_Score=164, Evalue=7e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550 [H]

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 31232; Mature: 31232

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQVVKVLNNNVCMAKDDKGMECIVVGKGIGFGKRPGDIIEEDKLEKIFYVQEDVNKIKF
CHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SELMEKIRGDVIGIAEEIIAMAEKIKGKKLNEHIHIALADHIAFAIERINMGIEIKNPFD
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCEEECCCCC
IEIKALYKDDYNIALKALELINQRLNISLPEDEAGFIALHLHAALENAGLSNTVKNTRLV
EEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHH
SQLVSTIEKHLGKYIDRDSIDYIRLVTHLRFAIDRVEKNAPVTNELLVSIKKKFKKAYNI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AMQVSKIIEDTLQKKVPEEETGYIAIHIQRLINTI
HHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCC
>Mature Secondary Structure
MYQVVKVLNNNVCMAKDDKGMECIVVGKGIGFGKRPGDIIEEDKLEKIFYVQEDVNKIKF
CHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SELMEKIRGDVIGIAEEIIAMAEKIKGKKLNEHIHIALADHIAFAIERINMGIEIKNPFD
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCEEECCCCC
IEIKALYKDDYNIALKALELINQRLNISLPEDEAGFIALHLHAALENAGLSNTVKNTRLV
EEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHH
SQLVSTIEKHLGKYIDRDSIDYIRLVTHLRFAIDRVEKNAPVTNELLVSIKKKFKKAYNI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AMQVSKIIEDTLQKKVPEEETGYIAIHIQRLINTI
HHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11902727; 9384377 [H]