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The map label for this gene is yhbO [C]

Identifier: 162447689

GI number: 162447689

Start: 865555

End: 866076

Strand: Direct

Name: yhbO [C]

Synonym: ACL_0831

Alternate gene names: 162447689

Gene position: 865555-866076 (Clockwise)

Preceding gene: 162447688

Following gene: 162447691

Centisome position: 57.82

GC content: 34.29

Gene sequence:

>522_bases
ATGTTAAAAAATAAACATATACTTACAATTGTTTCAAATGATTATGATGATTTAGAGTTTCATTATCCACTCATTAGACT
TAAAGAGGCAGGTGCAACCGTGGATATTGCATCGGAAATCAAAGGACAAACCTATAAAGGAAAATATGGTTTATCTACAG
TCAGTGATTTATCTTTTGATGAAGTAGATATCACCAAATATGATGGTATCATCATCCCGGGTGGTTGGGCACCAGATTAT
TTAAGACGCCTACCTAAAGTTCTAGATTTTATAAGATATCTAAATGAACACAAAAAGATTATTGGTAGTATTTGTCATGC
AGGTTGGGTTTTATCTAGTGCAGGTATCTTAAAAGGTGTCACGCTTACATCAACTCCTGGTATTAAGGATGATATGATGT
ATGCAGGTGCTACATGGGTTGACAAGCCTGTGGTAGTTGATAAACATATCGTTACTGCCAGAAGACCCATAGATTTACCA
TATTACTTACCTAAACTCATAGAAGCATTATCAAAACAATAA

Upstream 100 bases:

>100_bases
ATTATGTACCTAAAGATGAAAGTGCTTACGAAAAAGCACTAAAAGATCGCTTAAAACTCATTGATAGTATCAAAGGGTAT
AAAAGGAAAGGATAATTCTT

Downstream 100 bases:

>100_bases
AAAAGAAGACTTAGTCTTCTTTTTTCATTTCTGTGGATATAATTACTGGTATCGTAATCGGTCTTCTTCTAGCTGTTTGA
TATACATACTTGGATACTTC

Product: PfpI family intracellular peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MLKNKHILTIVSNDYDDLEFHYPLIRLKEAGATVDIASEIKGQTYKGKYGLSTVSDLSFDEVDITKYDGIIIPGGWAPDY
LRRLPKVLDFIRYLNEHKKIIGSICHAGWVLSSAGILKGVTLTSTPGIKDDMMYAGATWVDKPVVVDKHIVTARRPIDLP
YYLPKLIEALSKQ

Sequences:

>Translated_173_residues
MLKNKHILTIVSNDYDDLEFHYPLIRLKEAGATVDIASEIKGQTYKGKYGLSTVSDLSFDEVDITKYDGIIIPGGWAPDY
LRRLPKVLDFIRYLNEHKKIIGSICHAGWVLSSAGILKGVTLTSTPGIKDDMMYAGATWVDKPVVVDKHIVTARRPIDLP
YYLPKLIEALSKQ
>Mature_173_residues
MLKNKHILTIVSNDYDDLEFHYPLIRLKEAGATVDIASEIKGQTYKGKYGLSTVSDLSFDEVDITKYDGIIIPGGWAPDY
LRRLPKVLDFIRYLNEHKKIIGSICHAGWVLSSAGILKGVTLTSTPGIKDDMMYAGATWVDKPVVVDKHIVTARRPIDLP
YYLPKLIEALSKQ

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=161, Percent_Identity=37.2670807453416, Blast_Score=107, Evalue=3e-25,
Organism=Drosophila melanogaster, GI28571932, Length=169, Percent_Identity=27.810650887574, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19392; Mature: 19392

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNKHILTIVSNDYDDLEFHYPLIRLKEAGATVDIASEIKGQTYKGKYGLSTVSDLSFD
CCCCCEEEEEECCCCCCCEEECCEEEEECCCCEEEEHHHHCCCEECCCCCCCCCCCCCCC
EVDITKYDGIIIPGGWAPDYLRRLPKVLDFIRYLNEHKKIIGSICHAGWVLSSAGILKGV
CEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCE
TLTSTPGIKDDMMYAGATWVDKPVVVDKHIVTARRPIDLPYYLPKLIEALSKQ
EECCCCCCCCHHEECCCCCCCCCEEECCCEECCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKNKHILTIVSNDYDDLEFHYPLIRLKEAGATVDIASEIKGQTYKGKYGLSTVSDLSFD
CCCCCEEEEEECCCCCCCEEECCEEEEECCCCEEEEHHHHCCCEECCCCCCCCCCCCCCC
EVDITKYDGIIIPGGWAPDYLRRLPKVLDFIRYLNEHKKIIGSICHAGWVLSSAGILKGV
CEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCE
TLTSTPGIKDDMMYAGATWVDKPVVVDKHIVTARRPIDLPYYLPKLIEALSKQ
EECCCCCCCCHHEECCCCCCCCCEEECCCEECCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]