| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is cshB [H]
Identifier: 162447344
GI number: 162447344
Start: 504963
End: 506231
Strand: Direct
Name: cshB [H]
Synonym: ACL_0481
Alternate gene names: 162447344
Gene position: 504963-506231 (Clockwise)
Preceding gene: 162447343
Following gene: 162447345
Centisome position: 33.73
GC content: 29.39
Gene sequence:
>1269_bases ATGAAAATAAAAGAAATGCTTGAGAAATTAAAGTATACTGAATTATCCCCAATACAAACTGAAGTCATTAAAAACTTTAA TGATAAGCGACATATTGTGGGCTTAGCTCCAACTGGAACTGGTAAGACACATGCTTATCTTTTTCCTGTTTTAGAAAACT TAAAAAGAGAACCTAATGTTGTAGAAGCAATCATCTTACTACCAACCAATGAACTTGTTATACAAGTTCAAAGTATGTTG TTGGAAACAGATGATACTGTAAGTTATAAATCATATTATGGTTCACAAGATATGCAAAGAGAAGCTGTAAAACTAAAAAA CAGTCATCCAAATATCGTTATTACAACACCTTCAAAATTAATCGATTTAGTCATTCATAAAAATGCTTTAAATATTAAAC ATTTAGATTACTTCATACTAGATGAAGCAGATATGATGTTTGATGAAGATTTTATGAGTTTAATAGATCCTGTTTTAGCA AATCAAAAAATAGATAAATTTATGATATTTTCTGCAAGTATTACTAAAGCTATGGAACCATTTATTGCAAAATACTTTGG AAACCACATCTTTATTGATACAAAGAGGGATACTACTTTAAATATTGATTACTACTTATTAAACATAAGAGAACAAAGAC TAGCAAGTTTAATGGATGTTATTAAACGTATTAATCCTTACTTAAGTATTATATTCGTAAGTAAAAATGAAGACATCAAC ACTGTCTATGAATATCTATTAGAACAAGGTGTTAACGTTGTATCGTTCCAATCTAGTTTAGGCGTTAAACAAAGAAAACG TATTTTAGAAGATATTCATAATTTAAAATATCAATTTGTTGTATCAAGTGATTTATTAGCTCGTGGAATTGATTTTAAAG CAAGTCATATTATTCACTATGATTTACCATTTAAATTAGAGTTTTTCCTACATAGAAGTGGGCGTACAGCACGTATGGGT GATACTGGTGAAGTTTATACACTCTATGATGAAATGGATCAAAAAAAGATTGATAAATTGAGAAACCAAGGTATTGATTT TATACCAATTACATTAACACCAGATGGTTTTAAAAAACCTAAAAAGAAATCAAAAACTTATGATAAAAAGATTGCTAACG CGATTAAAAAAATAGCCAAACCAAAGCGTGTCACACCAGGCTATAAGAAAAAACACGCGGAAAAAGTTAAAGCTGCAATT AAAAAGGTAAAGAAAGGTAGGTACAGGGATGCTGATCTTAGGAAGTCACGTAAGTCTCAAGGGGAATGA
Upstream 100 bases:
>100_bases AAGTAACTTAATTTTACACAGTGATAATGAAATTCCTTTTAATCTGTTCACGTATGAAAAGTTTATCACTAAATTATGAT ATAATTATGGAGGTGAAAAT
Downstream 100 bases:
>100_bases TATGTTCTATGGTAGTGTATTAGAGGCACTCGAATACAATGCAAATACCATGATGGTATATACCGGAGCCCCACAAAATA CAATTAGAAAACCAATTGAA
Product: ATP-dependent RNA helicase, DEAD box containing
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKIKEMLEKLKYTELSPIQTEVIKNFNDKRHIVGLAPTGTGKTHAYLFPVLENLKREPNVVEAIILLPTNELVIQVQSML LETDDTVSYKSYYGSQDMQREAVKLKNSHPNIVITTPSKLIDLVIHKNALNIKHLDYFILDEADMMFDEDFMSLIDPVLA NQKIDKFMIFSASITKAMEPFIAKYFGNHIFIDTKRDTTLNIDYYLLNIREQRLASLMDVIKRINPYLSIIFVSKNEDIN TVYEYLLEQGVNVVSFQSSLGVKQRKRILEDIHNLKYQFVVSSDLLARGIDFKASHIIHYDLPFKLEFFLHRSGRTARMG DTGEVYTLYDEMDQKKIDKLRNQGIDFIPITLTPDGFKKPKKKSKTYDKKIANAIKKIAKPKRVTPGYKKKHAEKVKAAI KKVKKGRYRDADLRKSRKSQGE
Sequences:
>Translated_422_residues MKIKEMLEKLKYTELSPIQTEVIKNFNDKRHIVGLAPTGTGKTHAYLFPVLENLKREPNVVEAIILLPTNELVIQVQSML LETDDTVSYKSYYGSQDMQREAVKLKNSHPNIVITTPSKLIDLVIHKNALNIKHLDYFILDEADMMFDEDFMSLIDPVLA NQKIDKFMIFSASITKAMEPFIAKYFGNHIFIDTKRDTTLNIDYYLLNIREQRLASLMDVIKRINPYLSIIFVSKNEDIN TVYEYLLEQGVNVVSFQSSLGVKQRKRILEDIHNLKYQFVVSSDLLARGIDFKASHIIHYDLPFKLEFFLHRSGRTARMG DTGEVYTLYDEMDQKKIDKLRNQGIDFIPITLTPDGFKKPKKKSKTYDKKIANAIKKIAKPKRVTPGYKKKHAEKVKAAI KKVKKGRYRDADLRKSRKSQGE >Mature_422_residues MKIKEMLEKLKYTELSPIQTEVIKNFNDKRHIVGLAPTGTGKTHAYLFPVLENLKREPNVVEAIILLPTNELVIQVQSML LETDDTVSYKSYYGSQDMQREAVKLKNSHPNIVITTPSKLIDLVIHKNALNIKHLDYFILDEADMMFDEDFMSLIDPVLA NQKIDKFMIFSASITKAMEPFIAKYFGNHIFIDTKRDTTLNIDYYLLNIREQRLASLMDVIKRINPYLSIIFVSKNEDIN TVYEYLLEQGVNVVSFQSSLGVKQRKRILEDIHNLKYQFVVSSDLLARGIDFKASHIIHYDLPFKLEFFLHRSGRTARMG DTGEVYTLYDEMDQKKIDKLRNQGIDFIPITLTPDGFKKPKKKSKTYDKKIANAIKKIAKPKRVTPGYKKKHAEKVKAAI KKVKKGRYRDADLRKSRKSQGE
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI164664518, Length=350, Percent_Identity=26.8571428571429, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI41327773, Length=353, Percent_Identity=28.0453257790368, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI262118318, Length=345, Percent_Identity=25.7971014492754, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI21071032, Length=328, Percent_Identity=28.0487804878049, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI216548263, Length=345, Percent_Identity=25.2173913043478, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI262231852, Length=345, Percent_Identity=25.2173913043478, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI13518015, Length=345, Percent_Identity=25.2173913043478, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI20149629, Length=402, Percent_Identity=24.8756218905473, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI301171467, Length=359, Percent_Identity=25.0696378830084, Blast_Score=131, Evalue=9e-31, Organism=Homo sapiens, GI87196351, Length=359, Percent_Identity=25.0696378830084, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI301171475, Length=359, Percent_Identity=25.0696378830084, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI169881239, Length=359, Percent_Identity=25.6267409470752, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI13514809, Length=359, Percent_Identity=25.6267409470752, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI31542656, Length=343, Percent_Identity=26.2390670553936, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI164419743, Length=335, Percent_Identity=28.6567164179104, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI51094101, Length=335, Percent_Identity=28.6567164179104, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI224593278, Length=343, Percent_Identity=27.6967930029155, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI45446747, Length=347, Percent_Identity=27.3775216138329, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI45446743, Length=347, Percent_Identity=27.3775216138329, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI41327771, Length=395, Percent_Identity=27.0886075949367, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI38569505, Length=347, Percent_Identity=26.5129682997118, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI38569503, Length=347, Percent_Identity=26.5129682997118, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI41327779, Length=361, Percent_Identity=26.5927977839335, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI7661920, Length=316, Percent_Identity=27.8481012658228, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI148613856, Length=355, Percent_Identity=25.9154929577465, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI38201710, Length=355, Percent_Identity=25.9154929577465, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI222352149, Length=359, Percent_Identity=26.7409470752089, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI13514831, Length=365, Percent_Identity=24.6575342465753, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI4758138, Length=355, Percent_Identity=25.3521126760563, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI4503529, Length=306, Percent_Identity=25.8169934640523, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI83700235, Length=306, Percent_Identity=26.797385620915, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI154759257, Length=368, Percent_Identity=27.1739130434783, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI4758112, Length=342, Percent_Identity=25.7309941520468, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI18375623, Length=342, Percent_Identity=25.7309941520468, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI188035877, Length=336, Percent_Identity=26.1904761904762, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=25, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI50659095, Length=365, Percent_Identity=24.1095890410959, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI21040371, Length=342, Percent_Identity=23.3918128654971, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI41327776, Length=222, Percent_Identity=30.6306306306306, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI13129006, Length=375, Percent_Identity=23.4666666666667, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI38327634, Length=345, Percent_Identity=28.4057971014493, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI62241024, Length=334, Percent_Identity=25.1497005988024, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI8922886, Length=317, Percent_Identity=24.9211356466877, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI62241022, Length=317, Percent_Identity=24.9211356466877, Blast_Score=96, Evalue=9e-20, Organism=Homo sapiens, GI6005743, Length=317, Percent_Identity=24.9211356466877, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI256223453, Length=367, Percent_Identity=22.8882833787466, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI164419732, Length=317, Percent_Identity=23.6593059936909, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI256773275, Length=346, Percent_Identity=21.9653179190751, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI9966805, Length=300, Percent_Identity=24, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI9506931, Length=394, Percent_Identity=23.6040609137056, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI17505907, Length=183, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI20336298, Length=183, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI87082221, Length=352, Percent_Identity=28.125, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1787016, Length=332, Percent_Identity=28.6144578313253, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1788930, Length=325, Percent_Identity=28.6153846153846, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1790214, Length=350, Percent_Identity=28.5714285714286, Blast_Score=128, Evalue=7e-31, Organism=Escherichia coli, GI1787605, Length=398, Percent_Identity=24.3718592964824, Blast_Score=116, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17552114, Length=348, Percent_Identity=28.1609195402299, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI17510559, Length=375, Percent_Identity=27.7333333333333, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI86570094, Length=344, Percent_Identity=28.7790697674419, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI193206561, Length=336, Percent_Identity=27.3809523809524, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17510307, Length=372, Percent_Identity=28.494623655914, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17510309, Length=372, Percent_Identity=28.494623655914, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71995514, Length=372, Percent_Identity=28.494623655914, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71987143, Length=354, Percent_Identity=25.9887005649718, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17555296, Length=346, Percent_Identity=26.0115606936416, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17507945, Length=336, Percent_Identity=26.7857142857143, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17552642, Length=346, Percent_Identity=27.4566473988439, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17509811, Length=370, Percent_Identity=25.9459459459459, Blast_Score=121, Evalue=6e-28, Organism=Caenorhabditis elegans, GI71999646, Length=332, Percent_Identity=24.3975903614458, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71999644, Length=332, Percent_Identity=24.3975903614458, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI115532548, Length=347, Percent_Identity=25.6484149855908, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI115532546, Length=347, Percent_Identity=25.6484149855908, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71995718, Length=359, Percent_Identity=25.9052924791086, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71995724, Length=316, Percent_Identity=26.2658227848101, Blast_Score=118, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17507121, Length=316, Percent_Identity=25.9493670886076, Blast_Score=117, Evalue=8e-27, Organism=Caenorhabditis elegans, GI71997889, Length=350, Percent_Identity=26.5714285714286, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI115533224, Length=327, Percent_Identity=25.0764525993884, Blast_Score=114, Evalue=9e-26, Organism=Caenorhabditis elegans, GI32565321, Length=369, Percent_Identity=25.7452574525745, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17507641, Length=414, Percent_Identity=25.3623188405797, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17508543, Length=363, Percent_Identity=23.1404958677686, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17537549, Length=366, Percent_Identity=25.4098360655738, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI32564046, Length=408, Percent_Identity=25.2450980392157, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71990816, Length=370, Percent_Identity=26.7567567567568, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI193208216, Length=361, Percent_Identity=24.6537396121884, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71982858, Length=344, Percent_Identity=23.8372093023256, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17556951, Length=338, Percent_Identity=24.2603550295858, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17536099, Length=331, Percent_Identity=25.0755287009063, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17536101, Length=331, Percent_Identity=25.0755287009063, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=22.7642276422764, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17536103, Length=331, Percent_Identity=25.0755287009063, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17553716, Length=351, Percent_Identity=22.2222222222222, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17507877, Length=357, Percent_Identity=22.6890756302521, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI25148203, Length=405, Percent_Identity=22.4691358024691, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17505370, Length=332, Percent_Identity=25.3012048192771, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323021, Length=346, Percent_Identity=28.6127167630058, Blast_Score=144, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320041, Length=346, Percent_Identity=28.6127167630058, Blast_Score=140, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6324217, Length=328, Percent_Identity=27.7439024390244, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6324778, Length=368, Percent_Identity=24.4565217391304, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6321360, Length=356, Percent_Identity=25.8426966292135, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6325138, Length=371, Percent_Identity=25.0673854447439, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6320224, Length=349, Percent_Identity=24.9283667621776, Blast_Score=122, Evalue=9e-29, Organism=Saccharomyces cerevisiae, GI6321963, Length=405, Percent_Identity=25.1851851851852, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6319714, Length=454, Percent_Identity=23.1277533039648, Blast_Score=119, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6321856, Length=349, Percent_Identity=26.0744985673352, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6322427, Length=350, Percent_Identity=25.7142857142857, Blast_Score=116, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6321267, Length=354, Percent_Identity=28.8135593220339, Blast_Score=113, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6320449, Length=354, Percent_Identity=24.5762711864407, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6323947, Length=339, Percent_Identity=28.023598820059, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320119, Length=323, Percent_Identity=27.2445820433437, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320400, Length=371, Percent_Identity=24.2587601078167, Blast_Score=102, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6324620, Length=332, Percent_Identity=25.6024096385542, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6322912, Length=314, Percent_Identity=25.796178343949, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6322323, Length=314, Percent_Identity=25.796178343949, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6321111, Length=386, Percent_Identity=24.3523316062176, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6319618, Length=408, Percent_Identity=25.4901960784314, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6323306, Length=381, Percent_Identity=26.246719160105, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6320173, Length=220, Percent_Identity=26.3636363636364, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321374, Length=405, Percent_Identity=24.4444444444444, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324366, Length=158, Percent_Identity=36.0759493670886, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI28574962, Length=351, Percent_Identity=26.7806267806268, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI21356161, Length=341, Percent_Identity=29.0322580645161, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=26.1111111111111, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24642151, Length=341, Percent_Identity=24.633431085044, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24583281, Length=348, Percent_Identity=26.7241379310345, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24583279, Length=348, Percent_Identity=26.7241379310345, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24666101, Length=351, Percent_Identity=26.2108262108262, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=27.2479564032698, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24584994, Length=396, Percent_Identity=26.5151515151515, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI28575014, Length=341, Percent_Identity=27.8592375366569, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI21355559, Length=348, Percent_Identity=25.5747126436782, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI17977678, Length=342, Percent_Identity=26.3157894736842, Blast_Score=125, Evalue=7e-29, Organism=Drosophila melanogaster, GI17985987, Length=376, Percent_Identity=24.7340425531915, Blast_Score=125, Evalue=8e-29, Organism=Drosophila melanogaster, GI24585582, Length=341, Percent_Identity=25.8064516129032, Blast_Score=124, Evalue=9e-29, Organism=Drosophila melanogaster, GI24584399, Length=358, Percent_Identity=25.6983240223464, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24644479, Length=349, Percent_Identity=26.647564469914, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24644483, Length=373, Percent_Identity=25.7372654155496, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24645031, Length=316, Percent_Identity=26.2658227848101, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI281361218, Length=373, Percent_Identity=25.7372654155496, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24644481, Length=373, Percent_Identity=25.7372654155496, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24644487, Length=373, Percent_Identity=25.7372654155496, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI45551833, Length=373, Percent_Identity=25.7372654155496, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24644485, Length=373, Percent_Identity=25.7372654155496, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI17136814, Length=338, Percent_Identity=26.6272189349112, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI24642822, Length=400, Percent_Identity=25.25, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI21355075, Length=350, Percent_Identity=24.8571428571429, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI281365720, Length=300, Percent_Identity=25, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI24582080, Length=304, Percent_Identity=24.6710526315789, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24582078, Length=304, Percent_Identity=24.6710526315789, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI17136248, Length=304, Percent_Identity=24.6710526315789, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24582075, Length=304, Percent_Identity=24.6710526315789, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24581954, Length=343, Percent_Identity=25.3644314868805, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24581952, Length=343, Percent_Identity=25.3644314868805, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24581956, Length=343, Percent_Identity=25.3644314868805, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI28571808, Length=346, Percent_Identity=28.9017341040462, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI28571809, Length=346, Percent_Identity=28.9017341040462, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI17647335, Length=369, Percent_Identity=24.1192411924119, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI18859659, Length=415, Percent_Identity=22.1686746987952, Blast_Score=95, Evalue=8e-20, Organism=Drosophila melanogaster, GI28571338, Length=415, Percent_Identity=22.1686746987952, Blast_Score=95, Evalue=8e-20, Organism=Drosophila melanogaster, GI17136666, Length=433, Percent_Identity=23.7875288683603, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24643725, Length=392, Percent_Identity=22.9591836734694, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI19920478, Length=339, Percent_Identity=24.188790560472, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24640164, Length=373, Percent_Identity=19.0348525469169, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48847; Mature: 48847
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKEMLEKLKYTELSPIQTEVIKNFNDKRHIVGLAPTGTGKTHAYLFPVLENLKREPNV CCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCC VEAIILLPTNELVIQVQSMLLETDDTVSYKSYYGSQDMQREAVKLKNSHPNIVITTPSKL EEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCEEEECHHHH IDLVIHKNALNIKHLDYFILDEADMMFDEDFMSLIDPVLANQKIDKFMIFSASITKAMEP HHHHHCCCCCCEEECEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH FIAKYFGNHIFIDTKRDTTLNIDYYLLNIREQRLASLMDVIKRINPYLSIIFVSKNEDIN HHHHHCCCEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEEECCCCHH TVYEYLLEQGVNVVSFQSSLGVKQRKRILEDIHNLKYQFVVSSDLLARGIDFKASHIIHY HHHHHHHHCCCCEEEEHHHCCHHHHHHHHHHHHCCEEEEEEEHHHHHCCCCCCCCEEEEE DLPFKLEFFLHRSGRTARMGDTGEVYTLYDEMDQKKIDKLRNQGIDFIPITLTPDGFKKP CCCEEEEEEEECCCCEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC KKKSKTYDKKIANAIKKIAKPKRVTPGYKKKHAEKVKAAIKKVKKGRYRDADLRKSRKSQ HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC GE CC >Mature Secondary Structure MKIKEMLEKLKYTELSPIQTEVIKNFNDKRHIVGLAPTGTGKTHAYLFPVLENLKREPNV CCHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCC VEAIILLPTNELVIQVQSMLLETDDTVSYKSYYGSQDMQREAVKLKNSHPNIVITTPSKL EEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCEEEECHHHH IDLVIHKNALNIKHLDYFILDEADMMFDEDFMSLIDPVLANQKIDKFMIFSASITKAMEP HHHHHCCCCCCEEECEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH FIAKYFGNHIFIDTKRDTTLNIDYYLLNIREQRLASLMDVIKRINPYLSIIFVSKNEDIN HHHHHCCCEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEEECCCCHH TVYEYLLEQGVNVVSFQSSLGVKQRKRILEDIHNLKYQFVVSSDLLARGIDFKASHIIHY HHHHHHHHCCCCEEEEHHHCCHHHHHHHHHHHHCCEEEEEEEHHHHHCCCCCCCCEEEEE DLPFKLEFFLHRSGRTARMGDTGEVYTLYDEMDQKKIDKLRNQGIDFIPITLTPDGFKKP CCCEEEEEEEECCCCEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC KKKSKTYDKKIANAIKKIAKPKRVTPGYKKKHAEKVKAAIKKVKKGRYRDADLRKSRKSQ HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC GE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]