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The map label for this gene is rbgA [H]

Identifier: 162447203

GI number: 162447203

Start: 349414

End: 350274

Strand: Direct

Name: rbgA [H]

Synonym: ACL_0337

Alternate gene names: 162447203

Gene position: 349414-350274 (Clockwise)

Preceding gene: 162447202

Following gene: 162447204

Centisome position: 23.34

GC content: 32.52

Gene sequence:

>861_bases
ATGAAACAGGTTCAATGGTTTCCAGGACATATGTTCAAGTCCTTGAGAGAAATCAAGGAAAAAATTAAACTCATGGATAT
GGTATTTTTGCTCGTTGATGCAAGATTACCGTTTAGTAGTATGAATCCAGAGATTCTTAAAATTGTTGGTGACAAACCAA
CACTTTTATTGTTCAACAAAATCGATTTAGCTGATAGAAAAACTGTCGATAAATGGGTAGAATTTTATGAAGCGCAAGGT
TTTTATACCCTCCTTATTAATAGTAATGATGGCTTCAATGTAAATAAAATTTATAGTAGAAGTAAAGAAATCTTAGAAGA
AAAGATATTAAGATCTAAAAATAAAGGTATGAAGTTTGACCGTGTACGTGGAATGATTTTAGGTATACCAAATGTTGGTA
AATCTACCTTGATCAATAAGTTAGTATCTAAAAAGGCAACAAACGTTGGAAATAAACCAGGGGTGACTAAATCCCAACAA
TGGATTAAAATCAACCCACACTTCGAACTCCTTGATACACCAGGTGTATTATGGCCAAAATTTGAAGATGAAACTGTAGG
GTTTGCGCTTGCCATTACTGGTGCGATTAAAGATGATACGCTGCCAATGAATCAAGTAGTCATTTATGCAATTAACTACT
TAAAAGAATATTATCCAATACGTTTAAAAGAACGCTATGGTATTGAAAATGTTCAGGATTTAGATGAAGTTGAAATACTT
GATCATATTGGTAAAGTAAGAGGTGCTATTGTTAAAGGTGGCGAAACTGATTATGACAGAGTATATACGATATTATTAAC
AGATATAAGAAATAGAAATTTAGGAGCACTAAGCTTTGACCATAGACAATCTAGCATTTGA

Upstream 100 bases:

>100_bases
AACAATATGGTATTGTCTCCCCTGCACAAGGAACCAAAGCGCGTGAAGTCTTAATTGATATGTTAAGCTTACGAGAAATT
TTAGAAAAGTTGGGATTATA

Downstream 100 bases:

>100_bases
AAAAGCACTTTATGATAAAGGGTATACCTATATTTGTGGTGTAGATGAAGCTGGACGTGGTCCACTAGCTGGTCCAGTTG
TTGCTGCAGCTGTAATTTTC

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKQVQWFPGHMFKSLREIKEKIKLMDMVFLLVDARLPFSSMNPEILKIVGDKPTLLLFNKIDLADRKTVDKWVEFYEAQG
FYTLLINSNDGFNVNKIYSRSKEILEEKILRSKNKGMKFDRVRGMILGIPNVGKSTLINKLVSKKATNVGNKPGVTKSQQ
WIKINPHFELLDTPGVLWPKFEDETVGFALAITGAIKDDTLPMNQVVIYAINYLKEYYPIRLKERYGIENVQDLDEVEIL
DHIGKVRGAIVKGGETDYDRVYTILLTDIRNRNLGALSFDHRQSSI

Sequences:

>Translated_286_residues
MKQVQWFPGHMFKSLREIKEKIKLMDMVFLLVDARLPFSSMNPEILKIVGDKPTLLLFNKIDLADRKTVDKWVEFYEAQG
FYTLLINSNDGFNVNKIYSRSKEILEEKILRSKNKGMKFDRVRGMILGIPNVGKSTLINKLVSKKATNVGNKPGVTKSQQ
WIKINPHFELLDTPGVLWPKFEDETVGFALAITGAIKDDTLPMNQVVIYAINYLKEYYPIRLKERYGIENVQDLDEVEIL
DHIGKVRGAIVKGGETDYDRVYTILLTDIRNRNLGALSFDHRQSSI
>Mature_286_residues
MKQVQWFPGHMFKSLREIKEKIKLMDMVFLLVDARLPFSSMNPEILKIVGDKPTLLLFNKIDLADRKTVDKWVEFYEAQG
FYTLLINSNDGFNVNKIYSRSKEILEEKILRSKNKGMKFDRVRGMILGIPNVGKSTLINKLVSKKATNVGNKPGVTKSQQ
WIKINPHFELLDTPGVLWPKFEDETVGFALAITGAIKDDTLPMNQVVIYAINYLKEYYPIRLKERYGIENVQDLDEVEIL
DHIGKVRGAIVKGGETDYDRVYTILLTDIRNRNLGALSFDHRQSSI

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=269, Percent_Identity=32.3420074349442, Blast_Score=134, Evalue=9e-32,
Organism=Homo sapiens, GI296317324, Length=276, Percent_Identity=25.3623188405797, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI9506611, Length=276, Percent_Identity=25.3623188405797, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI7019419, Length=253, Percent_Identity=27.6679841897233, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI45643129, Length=180, Percent_Identity=25.5555555555556, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI45643127, Length=180, Percent_Identity=25.5555555555556, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI45593130, Length=180, Percent_Identity=25.5555555555556, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17534827, Length=271, Percent_Identity=29.520295202952, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI193211047, Length=208, Percent_Identity=29.8076923076923, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI115535155, Length=281, Percent_Identity=25.2669039145907, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI25143545, Length=281, Percent_Identity=25.2669039145907, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI32563985, Length=150, Percent_Identity=30.6666666666667, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71990926, Length=150, Percent_Identity=30.6666666666667, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32563983, Length=150, Percent_Identity=30.6666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71982363, Length=188, Percent_Identity=28.1914893617021, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320842, Length=184, Percent_Identity=30.9782608695652, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6324381, Length=267, Percent_Identity=23.5955056179775, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323744, Length=220, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI85815858, Length=237, Percent_Identity=30.379746835443, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI28572990, Length=189, Percent_Identity=31.2169312169312, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI19922460, Length=263, Percent_Identity=26.9961977186312, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 32885; Mature: 32885

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVQWFPGHMFKSLREIKEKIKLMDMVFLLVDARLPFSSMNPEILKIVGDKPTLLLFNK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEC
IDLADRKTVDKWVEFYEAQGFYTLLINSNDGFNVNKIYSRSKEILEEKILRSKNKGMKFD
CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
RVRGMILGIPNVGKSTLINKLVSKKATNVGNKPGVTKSQQWIKINPHFELLDTPGVLWPK
HHCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCC
FEDETVGFALAITGAIKDDTLPMNQVVIYAINYLKEYYPIRLKERYGIENVQDLDEVEIL
CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHCCCCCHHHHHHHHHH
DHIGKVRGAIVKGGETDYDRVYTILLTDIRNRNLGALSFDHRQSSI
HHHHHHHHHEEECCCCCHHHEEEEEEEHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MKQVQWFPGHMFKSLREIKEKIKLMDMVFLLVDARLPFSSMNPEILKIVGDKPTLLLFNK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEC
IDLADRKTVDKWVEFYEAQGFYTLLINSNDGFNVNKIYSRSKEILEEKILRSKNKGMKFD
CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
RVRGMILGIPNVGKSTLINKLVSKKATNVGNKPGVTKSQQWIKINPHFELLDTPGVLWPK
HHCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCC
FEDETVGFALAITGAIKDDTLPMNQVVIYAINYLKEYYPIRLKERYGIENVQDLDEVEIL
CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHCCCCCHHHHHHHHHH
DHIGKVRGAIVKGGETDYDRVYTILLTDIRNRNLGALSFDHRQSSI
HHHHHHHHHEEECCCCCHHHEEEEEEEHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]