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The map label for this gene is rpiB [H]

Identifier: 162447075

GI number: 162447075

Start: 196844

End: 197284

Strand: Direct

Name: rpiB [H]

Synonym: ACL_0205

Alternate gene names: 162447075

Gene position: 196844-197284 (Clockwise)

Preceding gene: 162447074

Following gene: 162447076

Centisome position: 13.15

GC content: 36.28

Gene sequence:

>441_bases
ATGAAAATAGGCATTGGCGCAGATCATGCGGGATTTAATAGAAAAACTGAAATCATTGAGTACTTAACTAAAAAAGGTTA
TGATGTTGTTGATTTCGGAGCACACTCAGTAGACCGAGTAGATTACCCTGATTATGCAAAAACAGTTTCAGAAGCTGTTG
TAAATAAGGAAGTCGAAGTCGGATTATTAGTATGTGGTACTGGTATTGGTATGAGTATTGCAGCAAATAAAGTCAAAGGT
ATTAGAGCAGCTCACGTCTTTGATGAATTAACTGCTAGACTTGCAAGAGAGCATAATCATGCAAATGTGATTGCTTTTGG
TGGCAGAAACCAAACAACATCAGAATCAAAAATTATTGTTGATGCATATTTAAATGCACATGAAGAATCTCGTCATCAAC
ATCGCGTAGACAAGATTGCAGCTATTGAAAATGGTGAGTAA

Upstream 100 bases:

>100_bases
TAAAAAAGCAAACTATAGTCAAAATCAATAATTGATATGAATATCAACCAATTAATCGATATTATTATGTTATAATAAAT
AAAAATGAGGATGGTGACAT

Downstream 100 bases:

>100_bases
ACCATGGGCAAACTTGTTGTATTAAATCACCCATTAATCGATCATAAAATGGCACTTATAAGAGATAAAAACACCAGTAC
AAAAACATTTAGAGAAACTG

Product: RpiB/LacA/LacB family sugar-phosphate isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKIGIGADHAGFNRKTEIIEYLTKKGYDVVDFGAHSVDRVDYPDYAKTVSEAVVNKEVEVGLLVCGTGIGMSIAANKVKG
IRAAHVFDELTARLAREHNHANVIAFGGRNQTTSESKIIVDAYLNAHEESRHQHRVDKIAAIENGE

Sequences:

>Translated_146_residues
MKIGIGADHAGFNRKTEIIEYLTKKGYDVVDFGAHSVDRVDYPDYAKTVSEAVVNKEVEVGLLVCGTGIGMSIAANKVKG
IRAAHVFDELTARLAREHNHANVIAFGGRNQTTSESKIIVDAYLNAHEESRHQHRVDKIAAIENGE
>Mature_146_residues
MKIGIGADHAGFNRKTEIIEYLTKKGYDVVDFGAHSVDRVDYPDYAKTVSEAVVNKEVEVGLLVCGTGIGMSIAANKVKG
IRAAHVFDELTARLAREHNHANVIAFGGRNQTTSESKIIVDAYLNAHEESRHQHRVDKIAAIENGE

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=144, Percent_Identity=50, Blast_Score=140, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 15972; Mature: 15972

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIGADHAGFNRKTEIIEYLTKKGYDVVDFGAHSVDRVDYPDYAKTVSEAVVNKEVEV
CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEE
GLLVCGTGIGMSIAANKVKGIRAAHVFDELTARLAREHNHANVIAFGGRNQTTSESKIIV
EEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEE
DAYLNAHEESRHQHRVDKIAAIENGE
EHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIGIGADHAGFNRKTEIIEYLTKKGYDVVDFGAHSVDRVDYPDYAKTVSEAVVNKEVEV
CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEE
GLLVCGTGIGMSIAANKVKGIRAAHVFDELTARLAREHNHANVIAFGGRNQTTSESKIIV
EEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEE
DAYLNAHEESRHQHRVDKIAAIENGE
EHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]