Click here to switch to the map view.

The map label for this gene is cdh [H]

Identifier: 162147792

GI number: 162147792

Start: 2047270

End: 2048100

Strand: Reverse

Name: cdh [H]

Synonym: GDI_2008

Alternate gene names: 162147792

Gene position: 2048100-2047270 (Counterclockwise)

Preceding gene: 162147793

Following gene: 162147788

Centisome position: 51.93

GC content: 67.63

Gene sequence:

>831_bases
ATGAAGCGCGTCCTTCTGGGTGCCGCCGTTCCGGCCATGCTGGCGGCGGGCATCCTGCTGACGGTGGCCAGGGCCAGCGG
TCCCGCACGGCTGAACAATGATCCGAACGTGCTGTGGTCCATCGTCCATGACCGCTGCGTACCCAATCAGGCCGGCGAAA
ACACGCCCGCCCCCTGTGCCGCCGTCGATACCGATCGCGGCTATGCGGTGCTGAAGGACCGGCGTGGCCTGGCGCAATAT
CTGGTCATCGCGACCGACCGCGTCACCGGGATCGAGGACCCGTCCATCCTGTCCCCCGCGGCGCCGGATTATTTCGGCGC
GGCCTGGCACCAGGTCGACCGGTCCCTGGCGCGGCTGGGCCATACCATGCCGCGCGAGACCATGGCGCTGGCGATCAATT
CGCAATATGGCCGGTCGCAGAACCAGCTTCACATCCATATCGACTGCCTGGCCCCGAACATCCGTGTGGCCCTGCACTGG
GCGCGGCCGCAGATCGGCCATGGCTGGACCAGGCTGGTATTGAACGACCATACCTATCGCGCGACGCGCATCGACGGGAA
CAGCCTGGACGGCGCCTATCCGTTCCGGCGCCTGGCGGCGTCGCTGGCCGACCCGGCGCGCGAAATGGGCGAACATACGC
TGGTGGTGGTGGGGACCGTCTGGCCGGGCGGCCGACCGGGTTTCATCCTGCTGGACGACATGGTCAAACCCCTGTCGGGC
GACCGCGCGGAGGGCGAGGAACTGCAGGACCATGCCTGCCGGATCGGCCATTTCGAACCCGGACGCGCCATCCAGGAGCA
ACCCTACCAGCAGGCCATGCTGCCGGATTGA

Upstream 100 bases:

>100_bases
CCGGCCGTGGCGTGGTGCGGGGCGAGAGCGTACGCCGCCGCCTGGACCGGCTGGCCGACGCCCTGTCGCTGCCCGCCCGG
ATCGAGGAGGCCGCCACGGC

Downstream 100 bases:

>100_bases
CCGGGCCCGAATTGACTGGGCGGCGTCACGCGTTTGACAGCGTTGCGGCGTCTTCCGCCGGGTGCGCATCCCGGCGGGGC
GACAACGCCAGATAGAGCCC

Product: CDP-diacylglycerol pyrophosphatase

Products: NA

Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKRVLLGAAVPAMLAAGILLTVARASGPARLNNDPNVLWSIVHDRCVPNQAGENTPAPCAAVDTDRGYAVLKDRRGLAQY
LVIATDRVTGIEDPSILSPAAPDYFGAAWHQVDRSLARLGHTMPRETMALAINSQYGRSQNQLHIHIDCLAPNIRVALHW
ARPQIGHGWTRLVLNDHTYRATRIDGNSLDGAYPFRRLAASLADPAREMGEHTLVVVGTVWPGGRPGFILLDDMVKPLSG
DRAEGEELQDHACRIGHFEPGRAIQEQPYQQAMLPD

Sequences:

>Translated_276_residues
MKRVLLGAAVPAMLAAGILLTVARASGPARLNNDPNVLWSIVHDRCVPNQAGENTPAPCAAVDTDRGYAVLKDRRGLAQY
LVIATDRVTGIEDPSILSPAAPDYFGAAWHQVDRSLARLGHTMPRETMALAINSQYGRSQNQLHIHIDCLAPNIRVALHW
ARPQIGHGWTRLVLNDHTYRATRIDGNSLDGAYPFRRLAASLADPAREMGEHTLVVVGTVWPGGRPGFILLDDMVKPLSG
DRAEGEELQDHACRIGHFEPGRAIQEQPYQQAMLPD
>Mature_276_residues
MKRVLLGAAVPAMLAAGILLTVARASGPARLNNDPNVLWSIVHDRCVPNQAGENTPAPCAAVDTDRGYAVLKDRRGLAQY
LVIATDRVTGIEDPSILSPAAPDYFGAAWHQVDRSLARLGHTMPRETMALAINSQYGRSQNQLHIHIDCLAPNIRVALHW
ARPQIGHGWTRLVLNDHTYRATRIDGNSLDGAYPFRRLAASLADPAREMGEHTLVVVGTVWPGGRPGFILLDDMVKPLSG
DRAEGEELQDHACRIGHFEPGRAIQEQPYQQAMLPD

Specific function: Phospholipid biosynthesis. [C]

COG id: COG2134

COG function: function code I; CDP-diacylglycerol pyrophosphatase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cdh family [H]

Homologues:

Organism=Escherichia coli, GI1790352, Length=255, Percent_Identity=35.6862745098039, Blast_Score=150, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003763
- InterPro:   IPR015993 [H]

Pfam domain/function: PF02611 CDH [H]

EC number: =3.6.1.26 [H]

Molecular weight: Translated: 30173; Mature: 30173

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVLLGAAVPAMLAAGILLTVARASGPARLNNDPNVLWSIVHDRCVPNQAGENTPAPCA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCE
AVDTDRGYAVLKDRRGLAQYLVIATDRVTGIEDPSILSPAAPDYFGAAWHQVDRSLARLG
EEECCCCEEEEECCCCHHHEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
HTMPRETMALAINSQYGRSQNQLHIHIDCLAPNIRVALHWARPQIGHGWTRLVLNDHTYR
CCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCEEE
ATRIDGNSLDGAYPFRRLAASLADPAREMGEHTLVVVGTVWPGGRPGFILLDDMVKPLSG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEHHHHHCCCCC
DRAEGEELQDHACRIGHFEPGRAIQEQPYQQAMLPD
CCCCCHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCC
>Mature Secondary Structure
MKRVLLGAAVPAMLAAGILLTVARASGPARLNNDPNVLWSIVHDRCVPNQAGENTPAPCA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCE
AVDTDRGYAVLKDRRGLAQYLVIATDRVTGIEDPSILSPAAPDYFGAAWHQVDRSLARLG
EEECCCCEEEEECCCCHHHEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
HTMPRETMALAINSQYGRSQNQLHIHIDCLAPNIRVALHWARPQIGHGWTRLVLNDHTYR
CCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCEEE
ATRIDGNSLDGAYPFRRLAASLADPAREMGEHTLVVVGTVWPGGRPGFILLDDMVKPLSG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEHHHHHCCCCC
DRAEGEELQDHACRIGHFEPGRAIQEQPYQQAMLPD
CCCCCHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]