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The map label for this gene is etfB [H]

Identifier: 162147074

GI number: 162147074

Start: 1276821

End: 1277570

Strand: Direct

Name: etfB [H]

Synonym: GDI_1279

Alternate gene names: 162147074

Gene position: 1276821-1277570 (Clockwise)

Preceding gene: 162147073

Following gene: 162147075

Centisome position: 32.37

GC content: 67.33

Gene sequence:

>750_bases
ATGAAGGTTCTTGTTCCCGTAAAGCGCGTCATCGATTTCAACATCAAGCCGCGTGTGAAGGCGGACGGCACGGGTGTCGA
GACGGCCGGCGTGAAGATGTCGATGAATCCGTTCGACGAAATCGCGGTCGAGGAAGCGGTGCGCCTGAAGGAAAAGGGCG
TTGCGACCGAGATCGTGGCGGTGTCGATCGGTGTGCAGCAATCCCAGGACACGCTGCGCACCGCGCTGGCCATGGGCGCC
GACCGCGCCATCCTGGTCCTGACCGACGTGGCGGTGGAGCCGCTGGGCGTCGCCAAGGTCCTGAAGGCGCTGGTGGCGAA
GGAAAGCCCCGACCTGGTGATCCTGGGCAAGCAGGCGATCGACGACGACATGAACGCGACCGGCCAGATGCTGGCCGGGC
TGCTGGGCTGGGCGCAGGGCACCTTCGCCAGCAGGATCGAGATCGCGGACGGCCGCGCGGCGGTCACGCGCGAAATCGAC
GGCGGGCTGGAAACCGTGTCGCTGGCGCTGCCGGCCATCGTCACCGCCGACCTGCGCCTGAACGAGCCGCGCTATGCCTC
GCTGCCCAACATCATGAAGGCCCGCAAGAAGCCGCTGGAAACGCTGGCCCCCGCCGACCTGGGGGTGGATGTGACGCCGC
GCCTGACCATCGTCTCGGTGGCCGAACCCCCGGCGCGCAAGGCCGGCGTCAAGGTCGCGTCCGCCGAGGATCTGGTGGCG
CGTCTGCGCAATGAAGCGAAGGTGATCTGA

Upstream 100 bases:

>100_bases
CGAATTACCCCGGCGGGATGTGATTTCCCCGCGAAATACGGTATGGGGGGCGTCCTGAACGGGCGCCCCGTTCCCCGTAG
ACAGACAGGCGAAGATGTCC

Downstream 100 bases:

>100_bases
TCATGACCGTACTCGTTTTCCTGGACCATGAGTCCGGCACGATCCGCCAGGCTTCGCGTTCCGCGGTGACGGCGGCCCTG
GAACTGGGCAAGTCGGCGGG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVPVKRVIDFNIKPRVKADGTGVETAGVKMSMNPFDEIAVEEAVRLKEKGVATEIVAVSIGVQQSQDTLRTALAMGA
DRAILVLTDVAVEPLGVAKVLKALVAKESPDLVILGKQAIDDDMNATGQMLAGLLGWAQGTFASRIEIADGRAAVTREID
GGLETVSLALPAIVTADLRLNEPRYASLPNIMKARKKPLETLAPADLGVDVTPRLTIVSVAEPPARKAGVKVASAEDLVA
RLRNEAKVI

Sequences:

>Translated_249_residues
MKVLVPVKRVIDFNIKPRVKADGTGVETAGVKMSMNPFDEIAVEEAVRLKEKGVATEIVAVSIGVQQSQDTLRTALAMGA
DRAILVLTDVAVEPLGVAKVLKALVAKESPDLVILGKQAIDDDMNATGQMLAGLLGWAQGTFASRIEIADGRAAVTREID
GGLETVSLALPAIVTADLRLNEPRYASLPNIMKARKKPLETLAPADLGVDVTPRLTIVSVAEPPARKAGVKVASAEDLVA
RLRNEAKVI
>Mature_249_residues
MKVLVPVKRVIDFNIKPRVKADGTGVETAGVKMSMNPFDEIAVEEAVRLKEKGVATEIVAVSIGVQQSQDTLRTALAMGA
DRAILVLTDVAVEPLGVAKVLKALVAKESPDLVILGKQAIDDDMNATGQMLAGLLGWAQGTFASRIEIADGRAAVTREID
GGLETVSLALPAIVTADLRLNEPRYASLPNIMKARKKPLETLAPADLGVDVTPRLTIVSVAEPPARKAGVKVASAEDLVA
RLRNEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=62.3015873015873, Blast_Score=302, Evalue=2e-82,
Organism=Homo sapiens, GI62420877, Length=235, Percent_Identity=62.5531914893617, Blast_Score=282, Evalue=2e-76,
Organism=Escherichia coli, GI87081682, Length=232, Percent_Identity=26.2931034482759, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=55.3359683794466, Blast_Score=261, Evalue=3e-70,
Organism=Saccharomyces cerevisiae, GI6321646, Length=256, Percent_Identity=52.34375, Blast_Score=256, Evalue=3e-69,
Organism=Drosophila melanogaster, GI24651147, Length=247, Percent_Identity=59.1093117408907, Blast_Score=272, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24651145, Length=247, Percent_Identity=59.1093117408907, Blast_Score=272, Evalue=2e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26313; Mature: 26313

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS50045 SIGMA54_INTERACT_4 ; PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVPVKRVIDFNIKPRVKADGTGVETAGVKMSMNPFDEIAVEEAVRLKEKGVATEIVA
CCEEECCHHHHCCCCCCCEECCCCCCEECCEEEECCCHHHHHHHHHHHHHHCCCCEEEEE
VSIGVQQSQDTLRTALAMGADRAILVLTDVAVEPLGVAKVLKALVAKESPDLVILGKQAI
EEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECHHC
DDDMNATGQMLAGLLGWAQGTFASRIEIADGRAAVTREIDGGLETVSLALPAIVTADLRL
CCCCCHHHHHHHHHHHHHCCCHHCEEEECCCCEEEEEHHCCCHHHHHHHHHHHEEECEEE
NEPRYASLPNIMKARKKPLETLAPADLGVDVTPRLTIVSVAEPPARKAGVKVASAEDLVA
CCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCHHHCEEEECHHHHHH
RLRNEAKVI
HHHHHCCCC
>Mature Secondary Structure
MKVLVPVKRVIDFNIKPRVKADGTGVETAGVKMSMNPFDEIAVEEAVRLKEKGVATEIVA
CCEEECCHHHHCCCCCCCEECCCCCCEECCEEEECCCHHHHHHHHHHHHHHCCCCEEEEE
VSIGVQQSQDTLRTALAMGADRAILVLTDVAVEPLGVAKVLKALVAKESPDLVILGKQAI
EEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECHHC
DDDMNATGQMLAGLLGWAQGTFASRIEIADGRAAVTREIDGGLETVSLALPAIVTADLRL
CCCCCHHHHHHHHHHHHHCCCHHCEEEECCCCEEEEEHHCCCHHHHHHHHHHHEEECEEE
NEPRYASLPNIMKARKKPLETLAPADLGVDVTPRLTIVSVAEPPARKAGVKVASAEDLVA
CCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCHHHCEEEECHHHHHH
RLRNEAKVI
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8376381; 1576992; 10026281 [H]