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The map label for this gene is fdhD [H]

Identifier: 162146940

GI number: 162146940

Start: 1139243

End: 1140100

Strand: Reverse

Name: fdhD [H]

Synonym: GDI_1145

Alternate gene names: 162146940

Gene position: 1140100-1139243 (Counterclockwise)

Preceding gene: 162146943

Following gene: 162146939

Centisome position: 28.91

GC content: 73.31

Gene sequence:

>858_bases
ATGGATGCTGAGATAGCGGGTGCTGACATAGCGGGTCCCGGCCACCAATCCAACCGCCCGGCCGCCTGGCGCGAATGCCC
CGGGCAGCGCCTGGGGGCGGACGGCGCGGCCGGCATCGTGCGGCCCCTGGCCGAGGAGGTTCCGGTCGGCCTGACCTATA
ACGGCCTGGCGCATGCCGTGATGATGGCGACACCGGCCGACCTGGAGGATTTCGCCACCGGCTTTTCGGTGACCGAGGCG
ATCGTGCCCTCGGCGGCGGCGATCCGCGACCTGCGCGTGACCCATGCGTCGGGGGGCATCACGGTGGACATGCGCATCCC
CGGCGATGCCTTCGCGCGCCTGCTGGCCCGGCGGCGGCACCTGACCGGGCGCACCGGCTGCGGCGTCTGCGGGGTCGAGG
ACCTGGCGGCGTTCGACCCCGCGCCGCCCCCGGTGCCGGTGGGCGGCCGCGTGGCGCTGTCGGCGGTGCGTGCGGCGCTG
GACGGTCTGGCGGCGCGGCAGGTCCTGAACGCGCGGGTCCATATGGTGCATGGCGCGGCCTGGGCCGGCCCCGACGGTGC
CCTGCGCCTGGTGCGCGAGGACGTGGGCCGTCACAACGCGTTGGACAAGCTGGTGGGCGCGGGCCTGCGGGACGGGATCG
CGTTCGATGCCGGGTTCGGCCTGATCACCAGCCGCTGCTCGTATGAAATGGTGCAGAAGGCCGCGATGGCGGGCCTGACG
GTGCTGGTGGCGATTTCCGCCCCCACCGCCCGGGCGGTGGACATGGCGCATGCCGCGGGGCTGACCCTGGTTGCGCTGGC
GCGGCACGACGCGCAGATTATCTTCACGCATCAAGGCCGGATCGACACGGCCGCCTGA

Upstream 100 bases:

>100_bases
CGTTCCAGCAGGGCGGCATCGTGAAAGGGGCTTTCGGGGTTGGCGGACAGGCGGTCCGGGGGAGTATCACTCATCGGGTT
GACCTCTGCTGGTGACGATC

Downstream 100 bases:

>100_bases
TCACGCAAGCGGGGGGCATCCATGTCCGACGAGGTGAAATTCCGTCCCTACACCCATCCGGCCGGCGGCTGGGGGGCGGC
GAAGGCTACGGCGCGGGTCC

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MDAEIAGADIAGPGHQSNRPAAWRECPGQRLGADGAAGIVRPLAEEVPVGLTYNGLAHAVMMATPADLEDFATGFSVTEA
IVPSAAAIRDLRVTHASGGITVDMRIPGDAFARLLARRRHLTGRTGCGVCGVEDLAAFDPAPPPVPVGGRVALSAVRAAL
DGLAARQVLNARVHMVHGAAWAGPDGALRLVREDVGRHNALDKLVGAGLRDGIAFDAGFGLITSRCSYEMVQKAAMAGLT
VLVAISAPTARAVDMAHAAGLTLVALARHDAQIIFTHQGRIDTAA

Sequences:

>Translated_285_residues
MDAEIAGADIAGPGHQSNRPAAWRECPGQRLGADGAAGIVRPLAEEVPVGLTYNGLAHAVMMATPADLEDFATGFSVTEA
IVPSAAAIRDLRVTHASGGITVDMRIPGDAFARLLARRRHLTGRTGCGVCGVEDLAAFDPAPPPVPVGGRVALSAVRAAL
DGLAARQVLNARVHMVHGAAWAGPDGALRLVREDVGRHNALDKLVGAGLRDGIAFDAGFGLITSRCSYEMVQKAAMAGLT
VLVAISAPTARAVDMAHAAGLTLVALARHDAQIIFTHQGRIDTAA
>Mature_285_residues
MDAEIAGADIAGPGHQSNRPAAWRECPGQRLGADGAAGIVRPLAEEVPVGLTYNGLAHAVMMATPADLEDFATGFSVTEA
IVPSAAAIRDLRVTHASGGITVDMRIPGDAFARLLARRRHLTGRTGCGVCGVEDLAAFDPAPPPVPVGGRVALSAVRAAL
DGLAARQVLNARVHMVHGAAWAGPDGALRLVREDVGRHNALDKLVGAGLRDGIAFDAGFGLITSRCSYEMVQKAAMAGLT
VLVAISAPTARAVDMAHAAGLTLVALARHDAQIIFTHQGRIDTAA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=241, Percent_Identity=43.5684647302905, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29313; Mature: 29313

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAEIAGADIAGPGHQSNRPAAWRECPGQRLGADGAAGIVRPLAEEVPVGLTYNGLAHAV
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHH
MMATPADLEDFATGFSVTEAIVPSAAAIRDLRVTHASGGITVDMRIPGDAFARLLARRRH
HHCCCCCHHHHHCCHHHHHHHCCCHHHHHHHEEEECCCCEEEEEECCHHHHHHHHHHHHH
LTGRTGCGVCGVEDLAAFDPAPPPVPVGGRVALSAVRAALDGLAARQVLNARVHMVHGAA
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
WAGPDGALRLVREDVGRHNALDKLVGAGLRDGIAFDAGFGLITSRCSYEMVQKAAMAGLT
CCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCEE
VLVAISAPTARAVDMAHAAGLTLVALARHDAQIIFTHQGRIDTAA
EEEEECCCCHHHHHHHHHCCHHHEEEECCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MDAEIAGADIAGPGHQSNRPAAWRECPGQRLGADGAAGIVRPLAEEVPVGLTYNGLAHAV
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHH
MMATPADLEDFATGFSVTEAIVPSAAAIRDLRVTHASGGITVDMRIPGDAFARLLARRRH
HHCCCCCHHHHHCCHHHHHHHCCCHHHHHHHEEEECCCCEEEEEECCHHHHHHHHHHHHH
LTGRTGCGVCGVEDLAAFDPAPPPVPVGGRVALSAVRAALDGLAARQVLNARVHMVHGAA
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
WAGPDGALRLVREDVGRHNALDKLVGAGLRDGIAFDAGFGLITSRCSYEMVQKAAMAGLT
CCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCEE
VLVAISAPTARAVDMAHAAGLTLVALARHDAQIIFTHQGRIDTAA
EEEEECCCCHHHHHHHHHCCHHHEEEECCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA