Click here to switch to the map view.

The map label for this gene is nifX [H]

Identifier: 162146266

GI number: 162146266

Start: 440483

End: 440977

Strand: Direct

Name: nifX [H]

Synonym: GDI_0441

Alternate gene names: 162146266

Gene position: 440483-440977 (Clockwise)

Preceding gene: 162146265

Following gene: 162146267

Centisome position: 11.17

GC content: 67.47

Gene sequence:

>495_bases
ATGACAGCGCGTCGCTTGCAGCTCATTGAACCGGAAGCCGGCGGGGACGGTGCCGCCGCCGGTGTCGTGCCGCGCCTGCG
GATCGCGATCGCGACCCAGGACATGAAGGCGCTGAACGCGCATTTCGGGTCCGCCCGACGCTTCGCGGTCTGGGACGTGA
CGCCGGACGATGCCCATTTTGTCGAGGCGGTGGGGTTCGACGACGTCTCGGACGAATCCGGCGCGCACAAGGTGGACGTC
GACGACAGGATCGGCCCCAAGGTCGATGCCCTGGCGGGATGCAACCTGCTGTTCGTCCTGGCCATTGGCGGTCCGGCGGC
GGCGAAGGTGGTCGGCGCGCATATCCACCCGGTCAAGCTGCCCGCGCCGCAGAGCATCGCGTCGGTGATCGAACGCGTCC
AGACGATGATGAAGGGCAACCCGCCGCCCTGGCTGCGCAAGGTGATGGGGGCGGCCGTACCCCGTTCGATGGATTTTCTG
GATGAGGAGGACTGA

Upstream 100 bases:

>100_bases
ATCTTCCGCGTCGCCAACCTGTTCCTGGGCCAGATGCATGAGCACACGCCGGACGATTTCGGCCACGTGCCGTCCGCCCA
TACGATCGAGGAGATAGTGC

Downstream 100 bases:

>100_bases
CGATGTCGCAAGCCGGTGTGATTGACGATCCGATGGCGACCTCGTTCATGAAGGCGCTGGTCGGGCGGATCCGTGCCGAG
GACATGTACGGGGCCTGGGA

Product: protein nifX

Products: oxidized ferredoxin; NH3; ADP; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTARRLQLIEPEAGGDGAAAGVVPRLRIAIATQDMKALNAHFGSARRFAVWDVTPDDAHFVEAVGFDDVSDESGAHKVDV
DDRIGPKVDALAGCNLLFVLAIGGPAAAKVVGAHIHPVKLPAPQSIASVIERVQTMMKGNPPPWLRKVMGAAVPRSMDFL
DEED

Sequences:

>Translated_164_residues
MTARRLQLIEPEAGGDGAAAGVVPRLRIAIATQDMKALNAHFGSARRFAVWDVTPDDAHFVEAVGFDDVSDESGAHKVDV
DDRIGPKVDALAGCNLLFVLAIGGPAAAKVVGAHIHPVKLPAPQSIASVIERVQTMMKGNPPPWLRKVMGAAVPRSMDFL
DEED
>Mature_163_residues
TARRLQLIEPEAGGDGAAAGVVPRLRIAIATQDMKALNAHFGSARRFAVWDVTPDDAHFVEAVGFDDVSDESGAHKVDVD
DRIGPKVDALAGCNLLFVLAIGGPAAAKVVGAHIHPVKLPAPQSIASVIERVQTMMKGNPPPWLRKVMGAAVPRSMDFLD
EED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifX/nifY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003731
- InterPro:   IPR013480 [H]

Pfam domain/function: PF02579 Nitro_FeMo-Co [H]

EC number: 1.18.6.1

Molecular weight: Translated: 17396; Mature: 17265

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARRLQLIEPEAGGDGAAAGVVPRLRIAIATQDMKALNAHFGSARRFAVWDVTPDDAHF
CCCCCEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEEECCCCCCHH
VEAVGFDDVSDESGAHKVDVDDRIGPKVDALAGCNLLFVLAIGGPAAAKVVGAHIHPVKL
EEECCCCCCCCCCCCEEECCCCCCCCCHHHHHCCCEEEEEEECCCHHHHHHCCCCCEEEC
PAPQSIASVIERVQTMMKGNPPPWLRKVMGAAVPRSMDFLDEED
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TARRLQLIEPEAGGDGAAAGVVPRLRIAIATQDMKALNAHFGSARRFAVWDVTPDDAHF
CCCCEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEEECCCCCCHH
VEAVGFDDVSDESGAHKVDVDDRIGPKVDALAGCNLLFVLAIGGPAAAKVVGAHIHPVKL
EEECCCCCCCCCCCCEEECCCCCCCCCHHHHHCCCEEEEEEECCCHHHHHHCCCCCEEEC
PAPQSIASVIERVQTMMKGNPPPWLRKVMGAAVPRSMDFLDEED
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced ferredoxin; H+; N2; ATP

Specific reaction: 3 reduced ferredoxin + 6 H+ + N2 + n ATP = 3 oxidized ferredoxin + 2 NH3 + n ADP + n phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]