Click here to switch to the map view.

The map label for this gene is 162146267

Identifier: 162146267

GI number: 162146267

Start: 440980

End: 441441

Strand: Direct

Name: 162146267

Synonym: GDI_0442

Alternate gene names: NA

Gene position: 440980-441441 (Clockwise)

Preceding gene: 162146266

Following gene: 162146268

Centisome position: 11.18

GC content: 63.85

Gene sequence:

>462_bases
ATGTCGCAAGCCGGTGTGATTGACGATCCGATGGCGACCTCGTTCATGAAGGCGCTGGTCGGGCGGATCCGTGCCGAGGA
CATGTACGGGGCCTGGGAACGCAAGACGAATGAAATGCTCCTTGACGATTATATCGTCAGCAAGGAGGAGCGGCGGGCCA
TGCCGATGATCAGCGACCCCGATCCCGACACGCTGGCGCGGGTCGAGACGTTCTTCCAGGCCGTCGGCCTCGCCATCGAG
CAGGAGACGGGGCTGATCGCCTCGCCGATGATGAAGATGAGCCATGAGGGATTCGGTCGCGTCATCCTGACGACCGGGCG
GCTGGTCGTCTTCATGAAGACCCTGCGCGACGTGCATCGCTTCGGTTTCGACAGCCTGTCCGCCCTGGCGGCGGAAGGGG
CGAAGGCCGTGAATGCGGCGGTGGCCGAAATCAACCGGTTTCCCGAAGTGGCCCGGGCGTGA

Upstream 100 bases:

>100_bases
TCCAGACGATGATGAAGGGCAACCCGCCGCCCTGGCTGCGCAAGGTGATGGGGGCGGCCGTACCCCGTTCGATGGATTTT
CTGGATGAGGAGGACTGACG

Downstream 100 bases:

>100_bases
CGGAGGGCACCATGACGGATATCGCGGAACTGAAGGCGGAACTGAAGAAGCTGTCCGCCCGGGCCACCAAGGCGAAGATG
GATCTGCACGATCTGTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSQAGVIDDPMATSFMKALVGRIRAEDMYGAWERKTNEMLLDDYIVSKEERRAMPMISDPDPDTLARVETFFQAVGLAIE
QETGLIASPMMKMSHEGFGRVILTTGRLVVFMKTLRDVHRFGFDSLSALAAEGAKAVNAAVAEINRFPEVARA

Sequences:

>Translated_153_residues
MSQAGVIDDPMATSFMKALVGRIRAEDMYGAWERKTNEMLLDDYIVSKEERRAMPMISDPDPDTLARVETFFQAVGLAIE
QETGLIASPMMKMSHEGFGRVILTTGRLVVFMKTLRDVHRFGFDSLSALAAEGAKAVNAAVAEINRFPEVARA
>Mature_152_residues
SQAGVIDDPMATSFMKALVGRIRAEDMYGAWERKTNEMLLDDYIVSKEERRAMPMISDPDPDTLARVETFFQAVGLAIEQ
ETGLIASPMMKMSHEGFGRVILTTGRLVVFMKTLRDVHRFGFDSLSALAAEGAKAVNAAVAEINRFPEVARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0460 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004952 [H]

Pfam domain/function: PF03270 DUF269 [H]

EC number: NA

Molecular weight: Translated: 16916; Mature: 16785

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAGVIDDPMATSFMKALVGRIRAEDMYGAWERKTNEMLLDDYIVSKEERRAMPMISDP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC
DPDTLARVETFFQAVGLAIEQETGLIASPMMKMSHEGFGRVILTTGRLVVFMKTLRDVHR
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHH
FGFDSLSALAAEGAKAVNAAVAEINRFPEVARA
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQAGVIDDPMATSFMKALVGRIRAEDMYGAWERKTNEMLLDDYIVSKEERRAMPMISDP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC
DPDTLARVETFFQAVGLAIEQETGLIASPMMKMSHEGFGRVILTTGRLVVFMKTLRDVHR
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHH
FGFDSLSALAAEGAKAVNAAVAEINRFPEVARA
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2747620; 2708314 [H]