Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is yhhW [C]

Identifier: 162146070

GI number: 162146070

Start: 250610

End: 251341

Strand: Direct

Name: yhhW [C]

Synonym: GDI_0238

Alternate gene names: 162146070

Gene position: 250610-251341 (Clockwise)

Preceding gene: 162146069

Following gene: 162146073

Centisome position: 6.35

GC content: 72.95

Gene sequence:

>732_bases
ATGATCACGATCCGACGGTCGGACACGCTGGGCACGGCACGGTCCGACGGCCTGGCCATCCGGTGCCATTTCGCGTTCGC
CGACTGGCAGGACCCGGCCCGGACGCATGACGGCCGCCTGCGCGCCGTCAACCTGGGCACCGTGGCGCCCGGCGGCCGGT
ATCGCCTGGGCCCGGAACAGGGCGTGGATATCCTGACCTGGCTGCAATCCGGAACGGCCGTCGCGCACATGGACGGATTC
CCGCGCGAGGATGTCTGCGCGGGCGGCCTGCACCTGGCCGGCACGGGCAGGGGATGCGCGACCGTGGACTGGCAGGCCGG
CCCCCAGGGCGCGTCCTTCATCCAGTTCTGGCTGCTCTCGGACATCGAGGGCACGACCCCCGCGCAGGAGGTCCGCGCCG
CGTTCCCCAGGCTGGAGGACGGGGGATTCCGGATCATCGCCTCCGGCTTCCCCGAAGACGACCCCGAGGAGGTGGAAACG
ATCGCGGACGGCGCCCCGGTGGCGCTGAGCGCCTGCGCGCGCCTGCTGCACGCCGCGATCCCGGCCGGCGAGGGCGCGGC
CTACCGCACCGATCCCGATCGCGACCTCTATCTTGTGGTGGTCTCGGGCGACGTGCGCATCCAGGACAGCCTTCTGCACG
GCGGGGACGCCGCCGCCCTGACCGGCCTGACGGACGTGACCGTCATCGCGGACGCACCGGCGGTCGTCCTGCTGGCCGAC
GTGGCCGCCTGA

Upstream 100 bases:

>100_bases
CCGGGTCGGTCACCCACCTCTACCGCGCGGTCGGCGGGGGATGGGAAGGGCTGTATCCGGAAAAGCCGAATCACCGGCCC
CCTGCGTAGAGGACGAGGAC

Downstream 100 bases:

>100_bases
CCGCTCCCGCCGCCGCGAGCGAGCCACGAATATATATGCCACAAATCGTCATGACGTAACGTCACTGACGGGCTCCCACC
CCGCCGGGAGGAGAAAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein ZMO1337 [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MITIRRSDTLGTARSDGLAIRCHFAFADWQDPARTHDGRLRAVNLGTVAPGGRYRLGPEQGVDILTWLQSGTAVAHMDGF
PREDVCAGGLHLAGTGRGCATVDWQAGPQGASFIQFWLLSDIEGTTPAQEVRAAFPRLEDGGFRIIASGFPEDDPEEVET
IADGAPVALSACARLLHAAIPAGEGAAYRTDPDRDLYLVVVSGDVRIQDSLLHGGDAAALTGLTDVTVIADAPAVVLLAD
VAA

Sequences:

>Translated_243_residues
MITIRRSDTLGTARSDGLAIRCHFAFADWQDPARTHDGRLRAVNLGTVAPGGRYRLGPEQGVDILTWLQSGTAVAHMDGF
PREDVCAGGLHLAGTGRGCATVDWQAGPQGASFIQFWLLSDIEGTTPAQEVRAAFPRLEDGGFRIIASGFPEDDPEEVET
IADGAPVALSACARLLHAAIPAGEGAAYRTDPDRDLYLVVVSGDVRIQDSLLHGGDAAALTGLTDVTVIADAPAVVLLAD
VAA
>Mature_243_residues
MITIRRSDTLGTARSDGLAIRCHFAFADWQDPARTHDGRLRAVNLGTVAPGGRYRLGPEQGVDILTWLQSGTAVAHMDGF
PREDVCAGGLHLAGTGRGCATVDWQAGPQGASFIQFWLLSDIEGTTPAQEVRAAFPRLEDGGFRIIASGFPEDDPEEVET
IADGAPVALSACARLLHAAIPAGEGAAYRTDPDRDLYLVVVSGDVRIQDSLLHGGDAAALTGLTDVTVIADAPAVVLLAD
VAA

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Escherichia coli, GI1789847, Length=243, Percent_Identity=24.2798353909465, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 25453; Mature: 25453

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIRRSDTLGTARSDGLAIRCHFAFADWQDPARTHDGRLRAVNLGTVAPGGRYRLGPEQ
CEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEECCHHH
GVDILTWLQSGTAVAHMDGFPREDVCAGGLHLAGTGRGCATVDWQAGPQGASFIQFWLLS
CCCEEEEHHCCCEEEECCCCCCHHHCCCCEEEEECCCCCEEEECCCCCCCCHHEEEEEHH
DIEGTTPAQEVRAAFPRLEDGGFRIIASGFPEDDPEEVETIADGAPVALSACARLLHAAI
CCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHC
PAGEGAAYRTDPDRDLYLVVVSGDVRIQDSLLHGGDAAALTGLTDVTVIADAPAVVLLAD
CCCCCCEECCCCCCCEEEEEEECCEEEEEEEECCCCCCEECCCCEEEEEECCCEEEEEEE
VAA
CCC
>Mature Secondary Structure
MITIRRSDTLGTARSDGLAIRCHFAFADWQDPARTHDGRLRAVNLGTVAPGGRYRLGPEQ
CEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEECCHHH
GVDILTWLQSGTAVAHMDGFPREDVCAGGLHLAGTGRGCATVDWQAGPQGASFIQFWLLS
CCCEEEEHHCCCEEEECCCCCCHHHCCCCEEEEECCCCCEEEECCCCCCCCHHEEEEEHH
DIEGTTPAQEVRAAFPRLEDGGFRIIASGFPEDDPEEVETIADGAPVALSACARLLHAAI
CCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHC
PAGEGAAYRTDPDRDLYLVVVSGDVRIQDSLLHGGDAAALTGLTDVTVIADAPAVVLLAD
CCCCCCEECCCCCCCEEEEEEECCEEEEEEEECCCCCCEECCCCEEEEEECCCEEEEEEE
VAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA