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The map label for this gene is trbL

Identifier: 162145969

GI number: 162145969

Start: 144140

End: 145561

Strand: Direct

Name: trbL

Synonym: GDI_0135

Alternate gene names: NA

Gene position: 144140-145561 (Clockwise)

Preceding gene: 162145968

Following gene: 162145970

Centisome position: 3.65

GC content: 63.85

Gene sequence:

>1422_bases
ATGGCCACCAACGATGTCGGGGTGATCGACACCTTCCTCAATACCTTCACCACCACCATTGATACCGGGTTCGGTCTGGT
GAAAGGGAACGTGATCTCGCTGGCCGGAACGTTATCCATGCTGGATATCGCCCTGGCCGGGCTGTTCTGGGCGTGGGCTG
CGGATGAGGACATCATCCAGCGTCTGGTGAAGAAGACGCTGTATATCGGCTTCTTTGCCTGGGTCATCAACGATTTCGAT
GCGCTCTCGAAGATCGTCTTCGATAGCTTCGCGGCCCTCGGTCTGAAAGTCGGTGGTGGAACGCTGGCGCTTTCCGATTT
CCTGCGTCCTGGCCGTCTGGCTTCCACCGGTTTTGACGCAGCCCAGCCGCTTCTGGACTCTGTCCATAATCTTCTTGGCC
CTGTCGCCCTCTTTACGAACTTCATCCAGATCTTCGTGCTGTGCCTGTCCTGGCTGATCGTGCTGGCGGCGTTCTTCATT
CTGGCCGTGCAGCTTTTCGTGGCCCTGATCGAATTCAAGCTGACGACGCTGGCAGGATTCGTGCTGATCCCGTTCGCCCT
GTTCAATCGCACCGCCTTCCTCGCCGAGAAGGTGCTGGGCAATGTCGTCTCCTCGGGTGTGAAGATCATGGTGCTGGCGG
TCATTTCCGCCATCGCGTCGGTTCTGTTCGCCCAGTTCTCAACCTCCTACGGCAGCGACGTTCCCACGATCGGGCAGTCC
GTGTCGGTGGTGCTGGCCTCGCTTGCAATTGTCGGTCTGTCGATTTTTGGCGGCAGCATCGCCAACGGTCTGATCTCCGG
CGCTCCCCAGCTTGGAGCAGGGGCTGCGGTCGGCACTGGCATGGCGGTTGGTGCGATGGGCGCGGCTGCGGTTGCCGGTG
TTGGAGCGGCTGCCTCGGGTGGTGCGGCTGCACTGGGCGCGACCGCTGCTGCTGCACGCGGTGGAGCCGCGATCGCTGGG
GCTGCCACGTCCGCCTATTCCGTCGGTGCTGCCGGGCAAACTGGTGCTGCTGGTATGGCTGCTGCCGCCGGGAATGTTGG
TCGCGCCGCCGGTGGCGCGGCAGTCAACGCCGTCAAGGGCAAAGCAGCCTCCGCCGCGTCATCCCTGAAGGACAGCTATG
CCGCCGGCAGCCAATGGGCCGCGCGGGGCATGAGGGGCGGGAAGGGTGGTGAAACCGGTGGTTCTGACGGCGGCGGATCG
CCGCCATCCGGTGGTGGCCCTTCTGGAGGGGGTGATGCTCCTCCGGGCGGTGGCCCCACGGGTGGTGGAGACGGTGGTGG
TGGGCCCGGTGAGCCACCTCGCTGGGCGCGCAACATGAAGCGCCGCAATGCCGCAGCCCATGCCGCTGAAGCCGCCCATG
TCATCCGCTCCGCCGATGGCGGAGGCGGGTCGGCATCCATCGACCTCTCGGAGAAAGAATAA

Upstream 100 bases:

>100_bases
CGGAAGCGGAGAGCGAGGCGCAATATCAGCATTTCTCCCAGCATGACGCCTACGTGCCCGGCACGGTGTCCATGTTCGGC
AGCCGCGGGAACTGACCGCC

Downstream 100 bases:

>100_bases
TGTTCCGTCGCTCCACCACACGCTACGGGACCATGCCCGAGCCGGTGACACCCTATCAGAAAGCAGCGCAGATCTGGGAC
GAGCGCATCGGCTCCGCCCG

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbL; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbl; Conjugal Transfer Protein Trbl; Type IV Secretory Pathway TrbL Component; Type IV Secretion System Protein; Conjugative Transfer Protein TrbL; Type IV Secretory Pathway TrbL-Like Protein

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MATNDVGVIDTFLNTFTTTIDTGFGLVKGNVISLAGTLSMLDIALAGLFWAWAADEDIIQRLVKKTLYIGFFAWVINDFD
ALSKIVFDSFAALGLKVGGGTLALSDFLRPGRLASTGFDAAQPLLDSVHNLLGPVALFTNFIQIFVLCLSWLIVLAAFFI
LAVQLFVALIEFKLTTLAGFVLIPFALFNRTAFLAEKVLGNVVSSGVKIMVLAVISAIASVLFAQFSTSYGSDVPTIGQS
VSVVLASLAIVGLSIFGGSIANGLISGAPQLGAGAAVGTGMAVGAMGAAAVAGVGAAASGGAAALGATAAAARGGAAIAG
AATSAYSVGAAGQTGAAGMAAAAGNVGRAAGGAAVNAVKGKAASAASSLKDSYAAGSQWAARGMRGGKGGETGGSDGGGS
PPSGGGPSGGGDAPPGGGPTGGGDGGGGPGEPPRWARNMKRRNAAAHAAEAAHVIRSADGGGGSASIDLSEKE

Sequences:

>Translated_473_residues
MATNDVGVIDTFLNTFTTTIDTGFGLVKGNVISLAGTLSMLDIALAGLFWAWAADEDIIQRLVKKTLYIGFFAWVINDFD
ALSKIVFDSFAALGLKVGGGTLALSDFLRPGRLASTGFDAAQPLLDSVHNLLGPVALFTNFIQIFVLCLSWLIVLAAFFI
LAVQLFVALIEFKLTTLAGFVLIPFALFNRTAFLAEKVLGNVVSSGVKIMVLAVISAIASVLFAQFSTSYGSDVPTIGQS
VSVVLASLAIVGLSIFGGSIANGLISGAPQLGAGAAVGTGMAVGAMGAAAVAGVGAAASGGAAALGATAAAARGGAAIAG
AATSAYSVGAAGQTGAAGMAAAAGNVGRAAGGAAVNAVKGKAASAASSLKDSYAAGSQWAARGMRGGKGGETGGSDGGGS
PPSGGGPSGGGDAPPGGGPTGGGDGGGGPGEPPRWARNMKRRNAAAHAAEAAHVIRSADGGGGSASIDLSEKE
>Mature_472_residues
ATNDVGVIDTFLNTFTTTIDTGFGLVKGNVISLAGTLSMLDIALAGLFWAWAADEDIIQRLVKKTLYIGFFAWVINDFDA
LSKIVFDSFAALGLKVGGGTLALSDFLRPGRLASTGFDAAQPLLDSVHNLLGPVALFTNFIQIFVLCLSWLIVLAAFFIL
AVQLFVALIEFKLTTLAGFVLIPFALFNRTAFLAEKVLGNVVSSGVKIMVLAVISAIASVLFAQFSTSYGSDVPTIGQSV
SVVLASLAIVGLSIFGGSIANGLISGAPQLGAGAAVGTGMAVGAMGAAAVAGVGAAASGGAAALGATAAAARGGAAIAGA
ATSAYSVGAAGQTGAAGMAAAAGNVGRAAGGAAVNAVKGKAASAASSLKDSYAAGSQWAARGMRGGKGGETGGSDGGGSP
PSGGGPSGGGDAPPGGGPTGGGDGGGGPGEPPRWARNMKRRNAAAHAAEAAHVIRSADGGGGSASIDLSEKE

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46111; Mature: 45980

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
ATNDVGVIDTFLNTFTTTIDTGFGLVKGNVISLAGTLSMLDIALAGLFWAWAADEDIIQ
CCCCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH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CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA