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The map label for this gene is trbJ

Identifier: 162145968

GI number: 162145968

Start: 143397

End: 144134

Strand: Direct

Name: trbJ

Synonym: GDI_0134

Alternate gene names: NA

Gene position: 143397-144134 (Clockwise)

Preceding gene: 162145967

Following gene: 162145969

Centisome position: 3.64

GC content: 62.2

Gene sequence:

>738_bases
ATGAAATACGGCATGCGTCTTTATGTCACCATCGGGGTAATTTCGATCACCATCATTTCGTCCGCCCGTGCGCAATGGGC
GGTGTATGACGGTGCGAACCACGTCCAGAACGTGCTGATCGCGGCCCGCACGCTCCAGCAGATCGACAACCAGATCACGT
CACTGGCCAATCAGGCCCAGATGCTGGTCAATCAGGGGCGTAATCTGGCGAGCCTGCCGCTTTCGACATTGTCGACGCTG
CAATCGACGATTTCCCAGACTACGGCGCTGCTCGCGCAGGCGCAGAATATCGCCTACAGCGTCCAGTCCGTCGAGCAGCA
GTATCAGCAGGCGTACACGTCCGTATCGTCCGGCATGTCCGACAGCGCCCTGTTTTCTCAGGCGCAGACACGCTGGCAGA
ATTCCGTCGGCGGGTTCGAGGACGCCCTGAAGTTGCAGGCGCGGGTGGTGGGCAATATCCCCAGCGACAGCAGCGCCATG
ACGCAGCTTGTCTCGGCCAGCCAGACCTCCTCGGGAGCCTTACAGGCGGCGCAGGCCGGAAACCAGCTTCTGGCCCTGCA
ATCCCGTCAGTTATCCGACATTCAGGCCGAACTTGCCGCCAATGGCCGCGCCACCGCCCTGCAGCAGGCGCGGGATGCCG
CGACGGAAGCGGAGAGCGAGGCGCAATATCAGCATTTCTCCCAGCATGACGCCTACGTGCCCGGCACGGTGTCCATGTTC
GGCAGCCGCGGGAACTGA

Upstream 100 bases:

>100_bases
TGGTTCTGGCGGAACATGGGCGCGACGGCTTTCTACCGGCCTGGTTCGACGCACGCGGCGTGTCATGGGCTGCGGATCTT
CTGCGCGATGGAGGCGTGCC

Downstream 100 bases:

>100_bases
CCGCCATGGCCACCAACGATGTCGGGGTGATCGACACCTTCCTCAATACCTTCACCACCACCATTGATACCGGGTTCGGT
CTGGTGAAAGGGAACGTGAT

Product: conjugal transfer protein TrbJ

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbJ; Conjugal Transfer TrbJ Signal Peptide Protein; Conjugal Transfer Protein Trbj; Conjugal Transfer Protein; Conjugative Transfer Protein TrbJ

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKYGMRLYVTIGVISITIISSARAQWAVYDGANHVQNVLIAARTLQQIDNQITSLANQAQMLVNQGRNLASLPLSTLSTL
QSTISQTTALLAQAQNIAYSVQSVEQQYQQAYTSVSSGMSDSALFSQAQTRWQNSVGGFEDALKLQARVVGNIPSDSSAM
TQLVSASQTSSGALQAAQAGNQLLALQSRQLSDIQAELAANGRATALQQARDAATEAESEAQYQHFSQHDAYVPGTVSMF
GSRGN

Sequences:

>Translated_245_residues
MKYGMRLYVTIGVISITIISSARAQWAVYDGANHVQNVLIAARTLQQIDNQITSLANQAQMLVNQGRNLASLPLSTLSTL
QSTISQTTALLAQAQNIAYSVQSVEQQYQQAYTSVSSGMSDSALFSQAQTRWQNSVGGFEDALKLQARVVGNIPSDSSAM
TQLVSASQTSSGALQAAQAGNQLLALQSRQLSDIQAELAANGRATALQQARDAATEAESEAQYQHFSQHDAYVPGTVSMF
GSRGN
>Mature_245_residues
MKYGMRLYVTIGVISITIISSARAQWAVYDGANHVQNVLIAARTLQQIDNQITSLANQAQMLVNQGRNLASLPLSTLSTL
QSTISQTTALLAQAQNIAYSVQSVEQQYQQAYTSVSSGMSDSALFSQAQTRWQNSVGGFEDALKLQARVVGNIPSDSSAM
TQLVSASQTSSGALQAAQAGNQLLALQSRQLSDIQAELAANGRATALQQARDAATEAESEAQYQHFSQHDAYVPGTVSMF
GSRGN

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26136; Mature: 26136

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYGMRLYVTIGVISITIISSARAQWAVYDGANHVQNVLIAARTLQQIDNQITSLANQAQ
CCCCCEEEEEHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLVNQGRNLASLPLSTLSTLQSTISQTTALLAQAQNIAYSVQSVEQQYQQAYTSVSSGMS
HHHHCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DSALFSQAQTRWQNSVGGFEDALKLQARVVGNIPSDSSAMTQLVSASQTSSGALQAAQAG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
NQLLALQSRQLSDIQAELAANGRATALQQARDAATEAESEAQYQHFSQHDAYVPGTVSMF
CCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC
GSRGN
CCCCC
>Mature Secondary Structure
MKYGMRLYVTIGVISITIISSARAQWAVYDGANHVQNVLIAARTLQQIDNQITSLANQAQ
CCCCCEEEEEHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLVNQGRNLASLPLSTLSTLQSTISQTTALLAQAQNIAYSVQSVEQQYQQAYTSVSSGMS
HHHHCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DSALFSQAQTRWQNSVGGFEDALKLQARVVGNIPSDSSAMTQLVSASQTSSGALQAAQAG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
NQLLALQSRQLSDIQAELAANGRATALQQARDAATEAESEAQYQHFSQHDAYVPGTVSMF
CCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC
GSRGN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA