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The map label for this gene is trbD

Identifier: 162145966

GI number: 162145966

Start: 140670

End: 140945

Strand: Direct

Name: trbD

Synonym: GDI_0132

Alternate gene names: NA

Gene position: 140670-140945 (Clockwise)

Preceding gene: 162145965

Following gene: 162145967

Centisome position: 3.57

GC content: 67.03

Gene sequence:

>276_bases
ATGGCGGGATATGACGATGATATGGTGCCGGGATTTCATGTCCCGGTGCATCGCTCCCTGACCGATCCAATCCTGCTGGG
TGGGGCACCTCGCGCCGTGGCCATTGCCAACGGCACACTGGCAGCGGCTATCGCCCTCGGCCTGCGCCTGTGGCTGATCG
GCGCTGCCTTCTGGGTCGTGGGGCATACGCTGGCGGTCTGGGGTGCCAGGCGTGATCCGCTGTTCATCGAGGTGGGGCGG
CGGCATCTCCGCTATCCCGCCTGGCTGCGGGCGTAG

Upstream 100 bases:

>100_bases
TCCGTCGCCTGATCCAGATCGTCTTCGGCCTGTCCATAGCTTTTGCGGCGTCCAGCTTCTTCCTGTCGTTCTTCTCCTTC
TCCGGGGGAGCACTGATCTG

Downstream 100 bases:

>100_bases
GGAGGGCAGGGCGATGATGTCCCTTGGAGAATATCGCAATCGTGCTGCCCTGCTGTCCGACTTCCTGCCCTGGGCAGCAC
TGGTTGAGAAAGGTGTTGTC

Product: conjugal transfer protein trbD

Products: NA

Alternate protein names: Conjugal Transfer Protein TrbD; Conjugal Transfer Protein; Conjugal Transfer TrbD Transmembrane Protein; Type IV Secretory Pathway TrbD Component; Type IV Secretory Pathway VirB3 Family Protein; Conjugal Transfer Protein Trbd; Conjugal Transfer Trbd Transmembrane Protein; Conjugative Transfer Protein TrbD; P-Type Conjugative Transfer Protein TrbD

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MAGYDDDMVPGFHVPVHRSLTDPILLGGAPRAVAIANGTLAAAIALGLRLWLIGAAFWVVGHTLAVWGARRDPLFIEVGR
RHLRYPAWLRA

Sequences:

>Translated_91_residues
MAGYDDDMVPGFHVPVHRSLTDPILLGGAPRAVAIANGTLAAAIALGLRLWLIGAAFWVVGHTLAVWGARRDPLFIEVGR
RHLRYPAWLRA
>Mature_90_residues
AGYDDDMVPGFHVPVHRSLTDPILLGGAPRAVAIANGTLAAAIALGLRLWLIGAAFWVVGHTLAVWGARRDPLFIEVGRR
HLRYPAWLRA

Specific function: Unknown

COG id: COG5268

COG function: function code NU; Type IV secretory pathway, TrbD component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9893; Mature: 9762

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGYDDDMVPGFHVPVHRSLTDPILLGGAPRAVAIANGTLAAAIALGLRLWLIGAAFWVV
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
GHTLAVWGARRDPLFIEVGRRHLRYPAWLRA
HHHHHHCCCCCCCEEEEECHHHCCCCHHCCC
>Mature Secondary Structure 
AGYDDDMVPGFHVPVHRSLTDPILLGGAPRAVAIANGTLAAAIALGLRLWLIGAAFWVV
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
GHTLAVWGARRDPLFIEVGRRHLRYPAWLRA
HHHHHHCCCCCCCEEEEECHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA