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The map label for this gene is trbE [H]

Identifier: 162145967

GI number: 162145967

Start: 140959

End: 143400

Strand: Direct

Name: trbE [H]

Synonym: GDI_0133

Alternate gene names: 162145967

Gene position: 140959-143400 (Clockwise)

Preceding gene: 162145966

Following gene: 162145968

Centisome position: 3.57

GC content: 61.71

Gene sequence:

>2442_bases
ATGATGTCCCTTGGAGAATATCGCAATCGTGCTGCCCTGCTGTCCGACTTCCTGCCCTGGGCAGCACTGGTTGAGAAAGG
TGTTGTCCTGAACAAGGATGGCAGTTTTCAACGCACCGCCAAAATTCGAGGCCCTGATCTGGATAGCGCCACGCCAGCCG
AACTGGTGGGTGTCACGGGGCGTCTGAACAATGCCCTGCGGCGTCTTGGTTCCGGCTGGGCCGTGTTTGTGGAGGCACAG
CGCGTGCCCGCCACGATTTATCCAGAAAGCGATTTTCCCGACGCGGCCAGTCAGATGGTGGATCTGGAACGCAGGGAGCA
GTTCGAGGATGAGGGCGCGCATTTCGAGAGCCGGTATTTGCTCACATTGGTCTGGCTGCCGCCAGCGGAATCTTCGGGCC
GCGCCGAGCGTTTTCTCTATGAGGGTCGGGAGCGCGAGGGGCCGGACCCGCACGGCATGCTCCACATGTTTGTGGACCGC
AGCGATCGGCTTCTGGCCCTGCTGGACGGGTTTATGCCTGAAGCCTCCTGGCTGGATGACGGGGAGACTCTGACCTACCT
GCATTCGACCATTTCCACCCGCCAGCAGCGCGTCGGCGTGCCGGAAATTCCGATGCACCTTGATGCGCTGCTGGTGGATC
AACCGCTGTCGGGCGGTCTGGAGCCGAAACTCGGTGACGCGTATCTGAAAACCCTGACGATCACCGGGTTCCCCAGCCGG
ACCTTCCCCGGCATTCTCGATGACTTGAACCGGCTGGCGATGCCCTATCGCTGGTCCACCCGTGCGATCCTGCTCGACAA
GAGCGACGCTACCAAGGTGCTGACAAAAATCCGGCGTCAGTGGTTTGCAAAACGCAAGAGCATTGCGGCCATTGTCCGGG
AGGTCATGACCAACGAAGCATCGGTTCTGGTGGACAATGATGCCGCCAACAAGGCGGCCGATGCCGATCTCGCGCTACAA
TCGCTGGGAGCGGATGATGTGGGGCAGGCATACATCACAGCAACCATCACGGTCTGGGACGGCTCTGCTTCGATTGCTGC
CGAGAAGCTGCGTCTGGTCGAAAAAATCATCCAGGGTCGCGATTTCACCTGCATGACGGAAGGCCTCAACGCGGTGGAAG
CCTGGCTTGGGAGCCTGCCCGGTCATGTTTACGCCAATGTGCGCCAGCCTCCGGTCTCCACGTTGAACCTTGCGCACATG
ATTCCGTTGTCGGCCGTCTGGGCGGGACCGGATCAGGACGTGCATTTCAAGGCCGCGCCGCTGTTCTACGGCAAGACCGC
TGGGGCCACGCCGTTCCGGTTTTCCCTGCATGTCGGCGATGTCGGTCACACCCTGATTGCGGGGCCAACGGGGGCGGGCA
AATCCGTGTTGCTGGCGCTGATGGCCTTGCAGTTTCGCCGGTATATGGGGGCACAGATTTTTGCCTTCGATTTCGGCGGA
TCCATGCGCGCGACCACACTGGGTATGGGCGGCGACTGGCATGACCTCGGGGGTGGACTGGCGGACGATCATCCATCGGA
AGAACAGGGTAGCAGCGTCTCACTCCAGCCCCTGGCAGGGATCGACGATGCCGACGAGCGCAAATGGGCCAGCGAATGGC
TGGGCCAGATCCTGGTCGGCGAGGGCGTATCGCTCACGCCAGACGTCAAAGCGTATCTCTGGTCAGCCCTGAACTCCCTG
GCATCATCACCCTCCCGCGAACGCACCCTGTCCGGGTTGGTGGCGCTGCTCCAGTCCAACGCGCTCAAGCAGGCATTGGC
GCCTTACTGCCTGGGTGGTCCTTATGGTCGCCTGCTCGACGCGGAGGCCGAACGTCTAGGCGAGGCTGATGTCGTCGTGT
TCGAGACCGAGGGCCTGATCGGTTCCGGCGCTGCCTCTTCCGTTCTGTCCTACCTGTTCCACCGCATTGAAGGGAGGCTG
GACGGTCGCCCAACGCTACTGATGATCGACGAGGGCTGGCTGGTGCTGGATGATGGCGATTTCGCCGGCCAGTTGCGGGA
ATGGCTGAAAACCCTGCGTAAGAAGAATGCGTCGGTGATTTTTGCTACCCAGTCGCTGTCGGATATCGCGAACTCTCCTA
TCGCGCCAGCCGTGGTGGAAAGCTGTCCCACGCGGATATTCCTGCCCAACGAGCGGGCCATCGAGCCGCAGATCATGGCC
ATCTATCGCGACTTCGGTCTGAATGACCGGCAGATCGCCATCATCGCGCGGGCCGCCTCGAAGCGGGAGTATTACTGCCA
GACCCAGCGTGGCAACCGGCTGTTTGAACTCGGCCTCGGTCCTATCGCACTCGCCCTTTGCGCTGCCTCCGGCAAGGACG
ATCACCGACTGCTCGATGTGGTTCTGGCGGAACATGGGCGCGACGGCTTTCTACCGGCCTGGTTCGACGCACGCGGCGTG
TCATGGGCTGCGGATCTTCTGCGCGATGGAGGCGTGCCATGA

Upstream 100 bases:

>100_bases
CTGGCGGTCTGGGGTGCCAGGCGTGATCCGCTGTTCATCGAGGTGGGGCGGCGGCATCTCCGCTATCCCGCCTGGCTGCG
GGCGTAGGGAGGGCAGGGCG

Downstream 100 bases:

>100_bases
AATACGGCATGCGTCTTTATGTCACCATCGGGGTAATTTCGATCACCATCATTTCGTCCGCCCGTGCGCAATGGGCGGTG
TATGACGGTGCGAACCACGT

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 813; Mature: 813

Protein sequence:

>813_residues
MMSLGEYRNRAALLSDFLPWAALVEKGVVLNKDGSFQRTAKIRGPDLDSATPAELVGVTGRLNNALRRLGSGWAVFVEAQ
RVPATIYPESDFPDAASQMVDLERREQFEDEGAHFESRYLLTLVWLPPAESSGRAERFLYEGREREGPDPHGMLHMFVDR
SDRLLALLDGFMPEASWLDDGETLTYLHSTISTRQQRVGVPEIPMHLDALLVDQPLSGGLEPKLGDAYLKTLTITGFPSR
TFPGILDDLNRLAMPYRWSTRAILLDKSDATKVLTKIRRQWFAKRKSIAAIVREVMTNEASVLVDNDAANKAADADLALQ
SLGADDVGQAYITATITVWDGSASIAAEKLRLVEKIIQGRDFTCMTEGLNAVEAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGPDQDVHFKAAPLFYGKTAGATPFRFSLHVGDVGHTLIAGPTGAGKSVLLALMALQFRRYMGAQIFAFDFGG
SMRATTLGMGGDWHDLGGGLADDHPSEEQGSSVSLQPLAGIDDADERKWASEWLGQILVGEGVSLTPDVKAYLWSALNSL
ASSPSRERTLSGLVALLQSNALKQALAPYCLGGPYGRLLDAEAERLGEADVVVFETEGLIGSGAASSVLSYLFHRIEGRL
DGRPTLLMIDEGWLVLDDGDFAGQLREWLKTLRKKNASVIFATQSLSDIANSPIAPAVVESCPTRIFLPNERAIEPQIMA
IYRDFGLNDRQIAIIARAASKREYYCQTQRGNRLFELGLGPIALALCAASGKDDHRLLDVVLAEHGRDGFLPAWFDARGV
SWAADLLRDGGVP

Sequences:

>Translated_813_residues
MMSLGEYRNRAALLSDFLPWAALVEKGVVLNKDGSFQRTAKIRGPDLDSATPAELVGVTGRLNNALRRLGSGWAVFVEAQ
RVPATIYPESDFPDAASQMVDLERREQFEDEGAHFESRYLLTLVWLPPAESSGRAERFLYEGREREGPDPHGMLHMFVDR
SDRLLALLDGFMPEASWLDDGETLTYLHSTISTRQQRVGVPEIPMHLDALLVDQPLSGGLEPKLGDAYLKTLTITGFPSR
TFPGILDDLNRLAMPYRWSTRAILLDKSDATKVLTKIRRQWFAKRKSIAAIVREVMTNEASVLVDNDAANKAADADLALQ
SLGADDVGQAYITATITVWDGSASIAAEKLRLVEKIIQGRDFTCMTEGLNAVEAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGPDQDVHFKAAPLFYGKTAGATPFRFSLHVGDVGHTLIAGPTGAGKSVLLALMALQFRRYMGAQIFAFDFGG
SMRATTLGMGGDWHDLGGGLADDHPSEEQGSSVSLQPLAGIDDADERKWASEWLGQILVGEGVSLTPDVKAYLWSALNSL
ASSPSRERTLSGLVALLQSNALKQALAPYCLGGPYGRLLDAEAERLGEADVVVFETEGLIGSGAASSVLSYLFHRIEGRL
DGRPTLLMIDEGWLVLDDGDFAGQLREWLKTLRKKNASVIFATQSLSDIANSPIAPAVVESCPTRIFLPNERAIEPQIMA
IYRDFGLNDRQIAIIARAASKREYYCQTQRGNRLFELGLGPIALALCAASGKDDHRLLDVVLAEHGRDGFLPAWFDARGV
SWAADLLRDGGVP
>Mature_813_residues
MMSLGEYRNRAALLSDFLPWAALVEKGVVLNKDGSFQRTAKIRGPDLDSATPAELVGVTGRLNNALRRLGSGWAVFVEAQ
RVPATIYPESDFPDAASQMVDLERREQFEDEGAHFESRYLLTLVWLPPAESSGRAERFLYEGREREGPDPHGMLHMFVDR
SDRLLALLDGFMPEASWLDDGETLTYLHSTISTRQQRVGVPEIPMHLDALLVDQPLSGGLEPKLGDAYLKTLTITGFPSR
TFPGILDDLNRLAMPYRWSTRAILLDKSDATKVLTKIRRQWFAKRKSIAAIVREVMTNEASVLVDNDAANKAADADLALQ
SLGADDVGQAYITATITVWDGSASIAAEKLRLVEKIIQGRDFTCMTEGLNAVEAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGPDQDVHFKAAPLFYGKTAGATPFRFSLHVGDVGHTLIAGPTGAGKSVLLALMALQFRRYMGAQIFAFDFGG
SMRATTLGMGGDWHDLGGGLADDHPSEEQGSSVSLQPLAGIDDADERKWASEWLGQILVGEGVSLTPDVKAYLWSALNSL
ASSPSRERTLSGLVALLQSNALKQALAPYCLGGPYGRLLDAEAERLGEADVVVFETEGLIGSGAASSVLSYLFHRIEGRL
DGRPTLLMIDEGWLVLDDGDFAGQLREWLKTLRKKNASVIFATQSLSDIANSPIAPAVVESCPTRIFLPNERAIEPQIMA
IYRDFGLNDRQIAIIARAASKREYYCQTQRGNRLFELGLGPIALALCAASGKDDHRLLDVVLAEHGRDGFLPAWFDARGV
SWAADLLRDGGVP

Specific function: Required For The Assembly Of Mature F-Pilin Subunits Into Extended F Pili. [C]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 88608; Mature: 88608

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSLGEYRNRAALLSDFLPWAALVEKGVVLNKDGSFQRTAKIRGPDLDSATPAELVGVTG
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHH
RLNNALRRLGSGWAVFVEAQRVPATIYPESDFPDAASQMVDLERREQFEDEGAHFESRYL
HHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
LTLVWLPPAESSGRAERFLYEGREREGPDPHGMLHMFVDRSDRLLALLDGFMPEASWLDD
EEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCC
GETLTYLHSTISTRQQRVGVPEIPMHLDALLVDQPLSGGLEPKLGDAYLKTLTITGFPSR
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHEECCCCCCCCCCCCCCCEEEEEEEECCCCC
TFPGILDDLNRLAMPYRWSTRAILLDKSDATKVLTKIRRQWFAKRKSIAAIVREVMTNEA
CCCHHHHHHHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLVDNDAANKAADADLALQSLGADDVGQAYITATITVWDGSASIAAEKLRLVEKIIQGR
EEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCC
DFTCMTEGLNAVEAWLGSLPGHVYANVRQPPVSTLNLAHMIPLSAVWAGPDQDVHFKAAP
CCEEHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCHHHEECCCCCCCEEEECC
LFYGKTAGATPFRFSLHVGDVGHTLIAGPTGAGKSVLLALMALQFRRYMGAQIFAFDFGG
EEECCCCCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCC
SMRATTLGMGGDWHDLGGGLADDHPSEEQGSSVSLQPLAGIDDADERKWASEWLGQILVG
CCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHC
EGVSLTPDVKAYLWSALNSLASSPSRERTLSGLVALLQSNALKQALAPYCLGGPYGRLLD
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHCC
AEAERLGEADVVVFETEGLIGSGAASSVLSYLFHRIEGRLDGRPTLLMIDEGWLVLDDGD
HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCC
FAGQLREWLKTLRKKNASVIFATQSLSDIANSPIAPAVVESCPTRIFLPNERAIEPQIMA
HHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCHHHHHHCCCEEECCCCCCCCHHHHH
IYRDFGLNDRQIAIIARAASKREYYCQTQRGNRLFELGLGPIALALCAASGKDDHRLLDV
HHHHCCCCCCEEEEEEECCCCCCEEEECCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHH
VLAEHGRDGFLPAWFDARGVSWAADLLRDGGVP
HHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MMSLGEYRNRAALLSDFLPWAALVEKGVVLNKDGSFQRTAKIRGPDLDSATPAELVGVTG
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHH
RLNNALRRLGSGWAVFVEAQRVPATIYPESDFPDAASQMVDLERREQFEDEGAHFESRYL
HHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
LTLVWLPPAESSGRAERFLYEGREREGPDPHGMLHMFVDRSDRLLALLDGFMPEASWLDD
EEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCC
GETLTYLHSTISTRQQRVGVPEIPMHLDALLVDQPLSGGLEPKLGDAYLKTLTITGFPSR
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHEECCCCCCCCCCCCCCCEEEEEEEECCCCC
TFPGILDDLNRLAMPYRWSTRAILLDKSDATKVLTKIRRQWFAKRKSIAAIVREVMTNEA
CCCHHHHHHHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLVDNDAANKAADADLALQSLGADDVGQAYITATITVWDGSASIAAEKLRLVEKIIQGR
EEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCC
DFTCMTEGLNAVEAWLGSLPGHVYANVRQPPVSTLNLAHMIPLSAVWAGPDQDVHFKAAP
CCEEHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCHHHEECCCCCCCEEEECC
LFYGKTAGATPFRFSLHVGDVGHTLIAGPTGAGKSVLLALMALQFRRYMGAQIFAFDFGG
EEECCCCCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCC
SMRATTLGMGGDWHDLGGGLADDHPSEEQGSSVSLQPLAGIDDADERKWASEWLGQILVG
CCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHC
EGVSLTPDVKAYLWSALNSLASSPSRERTLSGLVALLQSNALKQALAPYCLGGPYGRLLD
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHCC
AEAERLGEADVVVFETEGLIGSGAASSVLSYLFHRIEGRLDGRPTLLMIDEGWLVLDDGD
HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCC
FAGQLREWLKTLRKKNASVIFATQSLSDIANSPIAPAVVESCPTRIFLPNERAIEPQIMA
HHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCHHHHHHCCCEEECCCCCCCCHHHHH
IYRDFGLNDRQIAIIARAASKREYYCQTQRGNRLFELGLGPIALALCAASGKDDHRLLDV
HHHHCCCCCCEEEEEEECCCCCCEEEECCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHH
VLAEHGRDGFLPAWFDARGVSWAADLLRDGGVP
HHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]