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The map label for this gene is trbC

Identifier: 162145965

GI number: 162145965

Start: 140302

End: 140670

Strand: Direct

Name: trbC

Synonym: GDI_0131

Alternate gene names: NA

Gene position: 140302-140670 (Clockwise)

Preceding gene: 162145964

Following gene: 162145966

Centisome position: 3.56

GC content: 60.16

Gene sequence:

>369_bases
ATGAGTCCGCTGTCACGTCTGCGCGCCATCGTGTGCGCTGTTGCACGTCCCGATCATCGCATGACGGATCTTCGTGTGTT
CGGAACGTCCACGCTCCTGTCGCTGGTTTTCGTGTCATCGGCCTGGGCATCAGGCTCCGGTATGCCGTGGGAAAACCCGC
TCAACGAGATCCTGGAATCCGTGCAGGGGCCGGTCGCCAAGATCGTCTCGGTGATCATCATCACCGTGACTGGCCTGACC
CTCGCCTTTGGCGAGAGTTCGGGTGGGTTCCGTCGCCTGATCCAGATCGTCTTCGGCCTGTCCATAGCTTTTGCGGCGTC
CAGCTTCTTCCTGTCGTTCTTCTCCTTCTCCGGGGGAGCACTGATCTGA

Upstream 100 bases:

>100_bases
CTGAAGGCGATGGCCTCGATCCCGTGACGGGAGCCTATCGCATCAGGCCAGTCAGCCTTTCATCTTCCAAAACATCATTC
TCTGACAATGGAGAGTCGTT

Downstream 100 bases:

>100_bases
TGGCGGGATATGACGATGATATGGTGCCGGGATTTCATGTCCCGGTGCATCGCTCCCTGACCGATCCAATCCTGCTGGGT
GGGGCACCTCGCGCCGTGGC

Product: conjugal transfer protein trbC

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugal Transfer Protein Trbc; TrbC-Like Protein; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component; Conjugal Transfer TrbC Transmembrane Protein

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSPLSRLRAIVCAVARPDHRMTDLRVFGTSTLLSLVFVSSAWASGSGMPWENPLNEILESVQGPVAKIVSVIIITVTGLT
LAFGESSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI

Sequences:

>Translated_122_residues
MSPLSRLRAIVCAVARPDHRMTDLRVFGTSTLLSLVFVSSAWASGSGMPWENPLNEILESVQGPVAKIVSVIIITVTGLT
LAFGESSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI
>Mature_121_residues
SPLSRLRAIVCAVARPDHRMTDLRVFGTSTLLSLVFVSSAWASGSGMPWENPLNEILESVQGPVAKIVSVIIITVTGLTL
AFGESSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12971; Mature: 12840

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLSRLRAIVCAVARPDHRMTDLRVFGTSTLLSLVFVSSAWASGSGMPWENPLNEILES
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
VQGPVAKIVSVIIITVTGLTLAFGESSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGA
HCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LI
CC
>Mature Secondary Structure 
SPLSRLRAIVCAVARPDHRMTDLRVFGTSTLLSLVFVSSAWASGSGMPWENPLNEILES
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
VQGPVAKIVSVIIITVTGLTLAFGESSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGA
HCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA